##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935374.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 384625 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.834059148521288 33.0 31.0 34.0 30.0 34.0 2 31.87196360090998 33.0 31.0 34.0 30.0 34.0 3 31.944857978550537 33.0 31.0 34.0 30.0 34.0 4 35.691673708157296 37.0 35.0 37.0 33.0 37.0 5 35.703597010074745 37.0 35.0 37.0 35.0 37.0 6 35.65687097822554 37.0 35.0 37.0 33.0 37.0 7 35.922397140071496 37.0 35.0 37.0 35.0 37.0 8 35.720293792655184 37.0 35.0 37.0 35.0 37.0 9 37.534533636659084 39.0 37.0 39.0 35.0 39.0 10 36.92688722781931 39.0 37.0 39.0 32.0 39.0 11 36.90638154046149 39.0 37.0 39.0 33.0 39.0 12 36.929164770880725 39.0 37.0 39.0 33.0 39.0 13 36.84701462463438 39.0 37.0 39.0 33.0 39.0 14 37.914155346116345 40.0 37.0 41.0 33.0 41.0 15 38.026755931101725 40.0 37.0 41.0 33.0 41.0 16 38.01332466688333 40.0 37.0 41.0 33.0 41.0 17 37.96779460513487 40.0 37.0 41.0 33.0 41.0 18 37.90903867403315 39.0 37.0 41.0 33.0 41.0 19 37.79195320116997 39.0 37.0 41.0 33.0 41.0 20 37.78085147871303 39.0 36.0 41.0 33.0 41.0 21 37.77663178420539 39.0 36.0 41.0 33.0 41.0 22 37.85566460838479 40.0 36.0 41.0 33.0 41.0 23 37.85390705232369 40.0 36.0 41.0 33.0 41.0 24 37.85964770880728 40.0 36.0 41.0 33.0 41.0 25 37.618859928501784 39.0 36.0 41.0 33.0 41.0 26 37.67639649008775 39.0 36.0 41.0 33.0 41.0 27 37.67352876178096 40.0 36.0 41.0 33.0 41.0 28 37.561315567110825 40.0 36.0 41.0 33.0 41.0 29 37.524929476763084 40.0 36.0 41.0 33.0 41.0 30 37.4163223919402 39.0 36.0 41.0 33.0 41.0 31 37.4254351641209 40.0 36.0 41.0 33.0 41.0 32 37.34636854078648 40.0 36.0 41.0 33.0 41.0 33 37.20104257393565 40.0 35.0 41.0 32.0 41.0 34 37.061241468963274 40.0 35.0 41.0 32.0 41.0 35 36.985619759506015 40.0 35.0 41.0 32.0 41.0 36 36.909868053298666 40.0 35.0 41.0 31.0 41.0 37 36.816023399415016 39.0 35.0 41.0 31.0 41.0 38 36.79601949951251 39.0 35.0 41.0 31.0 41.0 39 36.686835229119275 39.0 35.0 41.0 31.0 41.0 40 36.59442833929152 39.0 35.0 41.0 31.0 41.0 41 36.43272278193045 39.0 35.0 41.0 30.0 41.0 42 36.4859278518037 39.0 35.0 41.0 30.0 41.0 43 36.45395385115372 39.0 35.0 41.0 30.0 41.0 44 36.35417094572636 39.0 35.0 41.0 30.0 41.0 45 36.35902502437439 39.0 35.0 41.0 30.0 41.0 46 36.24080857978551 39.0 35.0 41.0 30.0 41.0 47 36.175082222944425 39.0 35.0 40.0 30.0 41.0 48 36.09313747156321 39.0 35.0 40.0 30.0 41.0 49 36.017786155346116 39.0 35.0 40.0 29.0 41.0 50 35.85590640233994 38.0 35.0 40.0 29.0 41.0 51 34.603850503737405 37.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 4.0 10 1.0 11 4.0 12 6.0 13 8.0 14 8.0 15 20.0 16 23.0 17 36.0 18 131.0 19 233.0 20 442.0 21 719.0 22 1062.0 23 1449.0 24 1866.0 25 2612.0 26 3574.0 27 4118.0 28 4523.0 29 4912.0 30 5886.0 31 7595.0 32 9896.0 33 13795.0 34 24441.0 35 29552.0 36 30167.0 37 43975.0 38 80860.0 39 112653.0 40 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.67533311667208 20.353851153721155 24.408969775755608 12.561845953851153 2 30.821189470263242 28.73864153396165 24.486967825804353 15.953201169970752 3 29.339746506337345 28.283652908677283 27.147221319467015 15.22937926551836 4 27.243418914527133 24.69366265843354 31.18232044198895 16.880597985050375 5 27.55619109522262 28.477868053298668 25.693077673058173 18.27286317842054 6 24.883977900552487 35.88664283392915 25.003054923626912 14.226324341891452 7 76.69652258693532 5.9028924276893076 12.89281767955801 4.507767305817355 8 77.55320116997075 8.31771205719857 9.5480012999675 4.581085472863179 9 71.53643158921027 8.114397140071498 11.147481312967175 9.201689957751057 10 38.02378940526487 30.118947026324346 18.20942476438089 13.647838804029899 11 29.665258368540787 25.10913227169321 27.19974000649984 18.02586935326617 12 27.469093272668182 21.123431914202147 30.975885602859925 20.431589210269742 13 24.939876503087422 23.836724081897952 31.92382190445239 19.299577510562234 14 19.149821254468637 30.079688007799803 29.19831004224894 21.57218069548261 15 18.02430939226519 26.518297042573934 35.422294442638936 20.035099122521938 16 20.505687357816054 25.80409489762756 31.037764055898602 22.652453688657783 17 19.67994800129997 26.455378615534613 30.030029249268768 23.834644133896653 18 21.125511862203446 26.4811179720507 30.047968800779977 22.345401364965873 19 22.151186220344492 28.232434189145273 27.68436789080273 21.932011699707505 20 23.92174195645109 26.376600584985376 29.908872278193044 19.79278518037049 21 23.253558661033473 28.500747481312967 29.241208969775755 19.004484887877805 22 20.57822554436139 25.46142346441339 29.448163795905103 24.512187195320116 23 20.645823854403638 28.026519337016577 29.085212869678255 22.242443938901527 24 21.708417289567763 25.788495287617806 29.505622359441013 22.997465063373415 25 20.508807279818004 29.88651283717907 27.118882027949304 22.485797855053626 26 19.417874553136173 27.979720506987327 28.77400064998375 23.828404289892752 27 21.00019499512512 28.509847253818656 28.07747806304842 22.4124796880078 28 18.64595385115372 27.65940851478713 31.11758206044849 22.57705557361066 29 20.753461163470913 25.12421189470263 31.067143321416964 23.05518362040949 30 20.49580760480988 28.450568735781605 29.956191095222618 21.097432564185894 31 22.3001624959376 27.342476438089047 26.952486187845302 23.404874878128044 32 24.76698082547936 28.611764705882354 26.025609359766005 20.59564510887228 33 23.683587910302244 26.707572310692235 26.64517387065323 22.96366590835229 34 21.76327591810205 25.96685082872928 29.897172570685733 22.372700682482936 35 21.416444588885277 27.391355216119596 28.221514462138447 22.97068573285668 36 22.955866103347418 27.818784530386743 27.718167045823854 21.507182320441988 37 21.7268768280793 28.85901852453689 28.968995775105622 20.44510887227819 38 22.17900552486188 27.798245043873905 26.254663633409166 23.768085797855054 39 24.252713682157946 25.381345466363342 28.6377640558986 21.728176795580108 40 23.30945726356841 26.128566785830355 30.092687682807927 20.469288267793306 41 20.54780630484238 26.81234969125772 29.406824829379264 23.233019174520635 42 20.820279493012674 27.672408189795256 29.356646083847902 22.150666233344165 43 23.421254468638285 26.118687032824177 27.183880402989924 23.27617809554761 44 21.80305492362691 26.311602209944752 27.97322066948326 23.912122196945077 45 21.550341241468963 24.999155021124473 27.558531036724084 25.89197270068248 46 23.40721481962951 27.81254468638284 27.111862203444915 21.668378290542737 47 20.815339616509586 25.27422814429639 31.527331816704585 22.383100422489438 48 21.16659083522912 25.482742931426717 29.178550536236592 24.17211569710757 49 20.905557361065974 24.125836854078646 31.613129671758205 23.355476113097172 50 20.674683132921675 23.979460513487165 31.021384465388362 24.324471888202794 51 20.857718557036073 23.84998375040624 28.586805329866756 26.70549236269093 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 215.0 1 406.0 2 597.0 3 2011.5 4 3426.0 5 2326.0 6 1226.0 7 1198.5 8 1171.0 9 1176.5 10 1182.0 11 1190.5 12 1199.0 13 1189.5 14 1180.0 15 1128.0 16 1076.0 17 1098.5 18 1121.0 19 1167.5 20 1214.0 21 1285.5 22 1357.0 23 1484.5 24 1612.0 25 2190.0 26 3155.0 27 3542.0 28 4493.5 29 5445.0 30 6474.5 31 7504.0 32 7962.5 33 8421.0 34 10495.5 35 12570.0 36 13287.0 37 14004.0 38 14382.5 39 14761.0 40 16736.0 41 18711.0 42 20449.0 43 22187.0 44 24193.5 45 26200.0 46 35661.5 47 45123.0 48 40908.0 49 36693.0 50 35091.5 51 33490.0 52 28673.0 53 23856.0 54 21375.0 55 18894.0 56 17327.0 57 15760.0 58 15399.5 59 15039.0 60 14250.5 61 13462.0 62 11893.5 63 10325.0 64 8751.0 65 7177.0 66 5635.0 67 4093.0 68 3527.0 69 2961.0 70 2446.5 71 1932.0 72 1680.5 73 1429.0 74 1102.5 75 643.5 76 511.0 77 357.0 78 203.0 79 156.5 80 110.0 81 91.5 82 73.0 83 42.0 84 11.0 85 10.5 86 10.0 87 7.0 88 4.0 89 3.5 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 384625.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.60172809476788 #Duplication Level Percentage of deduplicated Percentage of total 1 76.23907476796565 27.14242810085792 2 8.428635927652657 6.001480090121631 3 2.9979840829099382 3.20200242456605 4 1.6577078514850674 2.360690567565329 5 1.1761295263366534 2.093612180043283 6 0.9258528567970726 1.9777176998072064 7 0.7456607145133043 1.8582767006337098 8 0.6356856823947018 1.8105207054682517 9 0.5844140601298408 1.8725535417151729 >10 6.500608815250025 43.17307831134119 >50 0.06363092680518039 1.489937080673059 >100 0.03510671823734089 2.042739671073077 >500 0.005851119706223483 1.3672945841688628 >1k 0.003656949816389677 3.607668341965262 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTC 3559 0.9253168670783231 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGC 3535 0.9190770230744232 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCG 3282 0.8532986675333117 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2047 0.5322066948326292 No Hit GCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGC 1432 0.3723106922326942 No Hit GAACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCT 795 0.20669483262918428 No Hit GAATGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTT 783 0.20357491062723432 No Hit CCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGC 664 0.1726356841078973 No Hit GAATGACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCT 658 0.17107572310692232 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 644 0.1674358141046474 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTACGGTAGT 595 0.15469613259668508 No Hit CTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGCT 579 0.15053623659408516 No Hit CGCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTG 533 0.13857653558661032 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTACGGTAGTCGTA 498 0.12947676308092299 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTC 488 0.126876828079298 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.199870003249918E-4 0.0 0.0 0.16249593760155995 0.0 2 5.199870003249918E-4 0.0 0.0 0.8756581085472863 0.0 3 5.199870003249918E-4 0.0 0.0 1.2373090672733182 0.0 4 5.199870003249918E-4 0.0 0.0 1.8209944751381215 0.0 5 5.199870003249918E-4 0.0 0.0 3.6438089047773805 0.0 6 5.199870003249918E-4 0.0 0.0 4.581085472863179 0.0 7 5.199870003249918E-4 0.0 0.0 5.394865128371791 0.0 8 5.199870003249918E-4 0.0 0.0 6.469418264543386 0.0 9 5.199870003249918E-4 0.0 0.0 6.847708807279818 0.0 10 5.199870003249918E-4 0.0 0.0 8.546506337341567 0.0 11 5.199870003249918E-4 0.0 0.0 9.61143971400715 0.0 12 5.199870003249918E-4 0.0 0.0 11.430094247643808 0.0 13 5.199870003249918E-4 0.0 0.0 11.972700682482937 0.0 14 5.199870003249918E-4 0.0 0.0 12.220994475138122 0.0 15 5.199870003249918E-4 0.0 0.0 12.636984075398114 0.0 16 5.199870003249918E-4 0.0 0.0 13.215209619759506 0.0 17 5.199870003249918E-4 0.0 0.0 13.915112122196945 0.0 18 5.199870003249918E-4 0.0 0.0 14.671433214169646 0.0 19 5.199870003249918E-4 0.0 0.0 15.287357816054598 0.0 20 5.199870003249918E-4 0.0 0.0 15.812804679883003 0.0 21 5.199870003249918E-4 0.0 0.0 16.382970425739355 0.0 22 5.199870003249918E-4 0.0 0.0 17.010074748131295 0.0 23 5.199870003249918E-4 0.0 0.0 17.631459213519662 0.0 24 5.199870003249918E-4 0.0 0.0 18.14702632434189 0.0 25 5.199870003249918E-4 0.0 0.0 18.61761455963601 0.0 26 5.199870003249918E-4 0.0 0.0 19.05726356841079 0.0 27 5.199870003249918E-4 0.0 0.0 19.526291842703934 0.0 28 5.199870003249918E-4 0.0 0.0 19.94072148196295 0.0 29 5.199870003249918E-4 0.0 0.0 20.404549886252845 0.0 30 5.199870003249918E-4 0.0 0.0 20.979655508612286 0.0 31 5.199870003249918E-4 0.0 0.0 21.462983425414365 0.0 32 5.199870003249918E-4 0.0 0.0 21.910952226194347 0.0 33 7.799805004874878E-4 0.0 0.0 22.36958076048099 0.0 34 7.799805004874878E-4 0.0 0.0 22.81026974325642 0.0 35 7.799805004874878E-4 0.0 0.0 23.276698082547938 0.0 36 7.799805004874878E-4 0.0 0.0 23.71426714332142 0.0 37 7.799805004874878E-4 0.0 0.0 24.177575560610986 0.0 38 7.799805004874878E-4 0.0 0.0 24.613844653883653 0.0 39 7.799805004874878E-4 0.0 0.0 25.07091322716932 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATGCGG 40 6.7939254E-9 45.0 2 ATCGTAG 20 7.0274266E-4 45.0 1 GGCATCC 35 1.2091186E-7 45.0 8 TCCCCGC 35 1.2091186E-7 45.0 33 TCGACGG 20 7.0274266E-4 45.0 2 GCGTAAG 20 7.0274266E-4 45.0 1 GTCGGTC 35 1.2091186E-7 45.0 21 CGTTTTT 1025 0.0 42.365856 1 CGTAAGG 65 0.0 41.538464 2 CCGATGA 195 0.0 41.53846 18 CATACGA 120 0.0 41.249996 18 TCGTTGA 50 1.0768417E-9 40.5 24 TTAATCG 50 1.0768417E-9 40.5 20 TCGTACG 50 1.0768417E-9 40.5 30 CTCACGA 45 1.9224899E-8 40.0 24 GTACAAG 45 1.9224899E-8 40.0 1 CTCGCCA 45 1.9224899E-8 40.0 42 TACGGCT 410 0.0 39.512196 7 GTTAGCG 40 3.4502227E-7 39.375 1 CGGTCTA 40 3.4502227E-7 39.375 31 >>END_MODULE