##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935365.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 617825 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.93126856310444 33.0 31.0 34.0 30.0 34.0 2 31.98526929146603 33.0 31.0 34.0 30.0 34.0 3 32.049891150406665 33.0 31.0 34.0 30.0 34.0 4 35.77227208351879 37.0 35.0 37.0 35.0 37.0 5 35.79247359689232 37.0 35.0 37.0 35.0 37.0 6 35.741413830777326 37.0 35.0 37.0 35.0 37.0 7 36.022274916036096 37.0 35.0 37.0 35.0 37.0 8 35.863560069599 37.0 35.0 37.0 35.0 37.0 9 37.68237931453081 39.0 38.0 39.0 35.0 39.0 10 37.0711981548173 39.0 37.0 39.0 33.0 39.0 11 37.03677416744224 39.0 37.0 39.0 33.0 39.0 12 37.0339594545381 39.0 37.0 39.0 33.0 39.0 13 36.97015174199814 39.0 37.0 39.0 33.0 39.0 14 37.961663901590256 40.0 37.0 41.0 33.0 41.0 15 38.105421438109495 40.0 37.0 41.0 33.0 41.0 16 38.07366810990167 40.0 37.0 41.0 33.0 41.0 17 38.082287055395945 40.0 37.0 41.0 33.0 41.0 18 37.93074414275887 39.0 37.0 41.0 33.0 41.0 19 37.72837292113463 39.0 37.0 41.0 33.0 41.0 20 37.66434993727997 39.0 35.0 41.0 33.0 41.0 21 37.60966940476672 39.0 35.0 41.0 33.0 41.0 22 37.730289321409785 39.0 35.0 41.0 33.0 41.0 23 37.74384493991017 39.0 35.0 41.0 34.0 41.0 24 37.70343058309392 39.0 35.0 41.0 33.0 41.0 25 37.46918140250071 39.0 35.0 41.0 33.0 41.0 26 37.53213288552584 39.0 35.0 41.0 33.0 41.0 27 37.550193015821634 39.0 35.0 41.0 33.0 41.0 28 37.45468862541982 39.0 35.0 41.0 33.0 41.0 29 37.41417715372476 39.0 35.0 41.0 33.0 41.0 30 37.23652814308259 39.0 35.0 41.0 33.0 41.0 31 37.14489216201999 39.0 35.0 41.0 32.0 41.0 32 36.984617003196696 39.0 35.0 41.0 32.0 41.0 33 36.72621211508113 39.0 35.0 41.0 31.0 41.0 34 36.47093270748189 39.0 35.0 41.0 30.0 41.0 35 36.32090316837292 39.0 35.0 41.0 30.0 41.0 36 36.17504795047141 39.0 35.0 41.0 29.0 41.0 37 36.073687532877436 39.0 35.0 41.0 29.0 41.0 38 35.966259053939226 39.0 35.0 41.0 29.0 41.0 39 35.88409015497916 39.0 35.0 41.0 28.0 41.0 40 35.774678913931936 39.0 35.0 41.0 27.0 41.0 41 35.621404119289444 39.0 35.0 41.0 26.0 41.0 42 35.631400477481485 39.0 35.0 41.0 26.0 41.0 43 35.59116578319103 39.0 35.0 41.0 26.0 41.0 44 35.38480799579169 39.0 35.0 41.0 25.0 41.0 45 35.389958321531175 39.0 35.0 41.0 25.0 41.0 46 35.340483146522075 38.0 35.0 41.0 25.0 41.0 47 35.299576740986524 38.0 35.0 40.0 25.0 41.0 48 35.21383077732368 38.0 35.0 40.0 24.0 41.0 49 35.15560878889653 38.0 35.0 40.0 24.0 41.0 50 35.0535815158014 38.0 34.0 40.0 24.0 41.0 51 33.93130093473071 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 5.0 11 9.0 12 14.0 13 13.0 14 23.0 15 34.0 16 54.0 17 120.0 18 214.0 19 389.0 20 681.0 21 1083.0 22 1638.0 23 2264.0 24 3621.0 25 6041.0 26 9395.0 27 11066.0 28 10961.0 29 10481.0 30 10978.0 31 12990.0 32 16251.0 33 22957.0 34 38470.0 35 42478.0 36 47082.0 37 67628.0 38 123409.0 39 177394.0 40 76.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.748472463885406 20.281147574151255 22.999716748270142 16.9706632136932 2 36.61150002023227 24.332780318051228 23.46182171326832 15.593897948448184 3 29.730587140371462 23.678226034880428 31.260308339740217 15.33087848500789 4 26.002832517298586 24.14599603447578 31.998057702423825 17.853113745801803 5 24.227734390806457 27.80577024238255 29.990531299316146 17.97596406749484 6 24.58689758426739 32.320155383806096 29.303443531744428 13.789503500182091 7 75.17500910451989 5.526969611135839 15.034192530247239 4.263828754097034 8 77.01549791607655 5.443288957228988 13.619228746004127 3.921984380690325 9 70.76469874155303 7.101687371019301 15.553757131873914 6.579856755553758 10 37.01695463925869 28.24149233197103 21.733500586735726 13.008052442034558 11 28.249423380407073 23.624165419010236 31.175332820782586 16.951078379800105 12 25.206004936673004 21.941488285517742 34.41055315016388 18.44195362764537 13 23.785699834095414 21.92708291182778 36.437016954639255 17.850200299437542 14 19.834580989762472 25.497511431230524 35.27762715979444 19.390280419212562 15 19.020758305345364 24.364990086189454 37.68381014041193 18.930441468053253 16 23.236838910694775 24.685954760652287 33.37110023064784 18.706106098005097 17 23.918423501800675 24.219479626107717 32.268037065512075 19.594059806579534 18 23.78456682717598 23.966819083073688 33.25828511309837 18.990328976651966 19 22.698822482094442 25.851980738882368 31.781977097074414 19.667219681948772 20 23.13308784850079 26.616274835107028 31.913244041597537 18.337393274794643 21 22.64816088698256 26.35438837858617 33.465949095617695 17.53150163881358 22 22.224416299113827 22.606077772832112 34.538906648322744 20.630599279731314 23 20.897665196455307 25.116659248168983 33.78011572856391 20.2055598268118 24 21.055962448913526 25.32869340023469 33.34261319953061 20.272730951321165 25 21.804556306397444 26.451988831788935 31.478007526403108 20.265447335410514 26 20.828551774369767 25.527455185529885 31.73050621130579 21.91348682879456 27 20.58236555658965 25.38469631368106 33.399263545502365 20.633674584226924 28 19.472018775543237 26.028244243920206 33.18480152146643 21.314935459070124 29 20.676405130902765 26.545866547970704 32.18824100675758 20.589487314368956 30 21.45607574960547 25.49427426860357 33.450410715008296 19.599239266782664 31 22.104964998179096 26.333023105248248 31.56541091733096 19.996600979241695 32 23.77323675798163 26.682960385222355 30.02403593250516 19.51976692429086 33 23.203981710031158 25.827702019180187 29.686238012382148 21.282078258406507 34 21.313640594019343 27.687451948367258 30.719702181038322 20.279205276575084 35 22.470278800631245 27.393841298102213 29.835633067616236 20.300246833650306 36 23.34997774450694 28.630761137862663 28.058754501679278 19.960506615951118 37 22.824262533889048 28.3539837332578 29.18075506818274 19.640998664670416 38 23.05054020151337 27.53789503500182 28.4983611864201 20.913203577064703 39 23.377008052442033 26.458786873305545 28.309796463399827 21.854408610852587 40 24.30672115890422 25.41350706106098 29.294217618257594 20.985554161777202 41 22.072431513778174 26.502974143163517 29.366568202970093 22.058026140088213 42 22.138307773236757 26.26002508801036 30.342896451260472 21.25877068749241 43 22.560433779792014 25.50414761461579 30.09201634767127 21.843402257920932 44 22.058835430744953 25.908307368591434 29.74240278395986 22.29045441670376 45 21.875450167927813 25.295188767045683 29.27252862865698 23.556832436369522 46 22.259863229879013 26.2605106624044 28.857362521749685 22.622263585966902 47 20.451907902723264 26.39469105329179 31.42249018735079 21.73091085663416 48 21.319467486747865 26.729899243313238 30.36895561040748 21.58167765953142 49 22.12131266944523 24.94460405454619 31.086148990409907 21.847934285598672 50 20.610852587706873 25.212964836320968 31.340751831020107 22.83543074495205 51 20.66167604095011 25.295026908914338 29.879658479342858 24.1636385707927 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 386.0 1 590.0 2 794.0 3 7858.0 4 14922.0 5 9799.0 6 4676.0 7 4573.0 8 4470.0 9 4456.5 10 4443.0 11 4296.0 12 4149.0 13 4046.5 14 3944.0 15 3722.5 16 3501.0 17 3388.5 18 3276.0 19 3133.5 20 2991.0 21 3035.0 22 3079.0 23 3362.0 24 3645.0 25 4197.5 26 5596.5 27 6443.0 28 7264.5 29 8086.0 30 9439.0 31 10792.0 32 12368.5 33 13945.0 34 15753.0 35 17561.0 36 19484.5 37 21408.0 38 22964.0 39 24520.0 40 26540.0 41 28560.0 42 30633.0 43 32706.0 44 35306.5 45 37907.0 46 45572.0 47 53237.0 48 53398.5 49 53560.0 50 52324.0 51 51088.0 52 45086.0 53 39084.0 54 35553.5 55 32023.0 56 30021.0 57 28019.0 58 26662.0 59 25305.0 60 23176.0 61 21047.0 62 18550.5 63 16054.0 64 14171.0 65 12288.0 66 10522.5 67 8757.0 68 7319.0 69 5881.0 70 4967.5 71 4054.0 72 3384.5 73 2715.0 74 2237.0 75 1325.5 76 892.0 77 716.0 78 540.0 79 455.5 80 371.0 81 229.5 82 88.0 83 67.0 84 46.0 85 29.5 86 13.0 87 20.0 88 27.0 89 17.5 90 8.0 91 6.5 92 5.0 93 5.0 94 5.0 95 3.5 96 2.0 97 2.5 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 617825.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.306010438511954 #Duplication Level Percentage of deduplicated Percentage of total 1 73.50362781514154 25.951198509098845 2 8.256875969583731 5.8303469834324355 3 3.396861402265773 3.5978887237972117 4 2.166263238175587 3.0592844999836792 5 1.568064609320718 2.7681052732469222 6 1.285201686062617 2.722520648623195 7 1.1032146070976747 2.726507450387655 8 0.967820940295527 2.733591697654746 9 0.8345910442327886 2.651947210761428 >10 6.844951844030627 41.76252418522898 >50 0.04360791240950731 1.0018883748342962 >100 0.022492502187467206 1.4248790991083236 >500 0.0036722452550966866 0.9018940157572588 >1k 0.002295153284435429 1.3477359631693377 >5k 4.590306568870858E-4 1.5196873649156903 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9377 1.5177436976490106 No Hit GAATCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTC 2419 0.3915348197305062 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCG 1884 0.3049407194593938 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGC 1847 0.2989519685995225 No Hit CGTTTCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTT 1156 0.18710799983814186 No Hit CGCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTG 1010 0.16347671266135233 No Hit GCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 936 0.15149921094160967 Illumina Single End Adapter 2 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTC 804 0.13013393760369038 No Hit CGTCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCT 787 0.1273823493707765 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCT 684 0.11071096184194554 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 658 0.10650265042690082 No Hit GAACTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCT 637 0.10310362966859549 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.09064055355480921 0.0 2 0.0 0.0 0.0 0.4172702626148181 0.0 3 0.0 0.0 0.0 0.7332173350058674 0.0 4 0.0 0.0 0.0 1.1610083761582972 0.0 5 0.0 0.0 0.0 2.2708695828106666 0.0 6 0.0 0.0 0.0 3.198154817302634 0.0 7 0.0 0.0 0.0 3.910654311495974 0.0 8 0.0 0.0 0.0 4.81366082628576 0.0 9 0.0 0.0 0.0 5.310241573261036 0.0 10 0.0 0.0 0.0 6.350180067171125 0.0 11 1.618581313478736E-4 0.0 0.0 7.109780277586696 0.0 12 1.618581313478736E-4 0.0 0.0 7.986242058835431 0.0 13 1.618581313478736E-4 0.0 0.0 8.302998421883219 0.0 14 1.618581313478736E-4 0.0 0.0 8.491401286772144 0.0 15 3.237162626957472E-4 0.0 0.0 8.702464290049772 0.0 16 3.237162626957472E-4 0.0 0.0 9.02148666693643 0.0 17 3.237162626957472E-4 0.0 0.0 9.419010237526807 0.0 18 3.237162626957472E-4 0.0 0.0 9.868975842673896 0.0 19 3.237162626957472E-4 0.0 0.0 10.18314247562012 0.0 20 3.237162626957472E-4 0.0 0.0 10.472221098207422 0.0 21 3.237162626957472E-4 0.0 0.0 10.789624893780601 0.0 22 3.237162626957472E-4 0.0 0.0 11.155909845020838 0.0 23 3.237162626957472E-4 0.0 0.0 11.494355197669243 0.0 24 3.237162626957472E-4 0.0 0.0 11.797839193946507 0.0 25 3.237162626957472E-4 0.0 0.0 12.062800954962976 0.0 26 3.237162626957472E-4 0.0 0.0 12.33941650143649 0.0 27 3.237162626957472E-4 0.0 0.0 12.637235463116578 0.0 28 4.8557439404362077E-4 0.0 0.0 12.914660300246833 0.0 29 4.8557439404362077E-4 0.0 0.0 13.24307044875167 0.0 30 4.8557439404362077E-4 0.0 0.0 13.675069801319143 0.0 31 6.474325253914944E-4 0.0 0.0 13.984704406587626 0.0 32 8.092906567393679E-4 0.0 0.0 14.316189859588071 0.0 33 9.711487880872415E-4 0.0 0.0 14.632460648241816 0.0 34 9.711487880872415E-4 0.0 0.0 14.968154412657306 0.0 35 9.711487880872415E-4 0.0 0.0 15.315178246267147 0.0 36 0.001133006919435115 0.0 0.0 15.637437785780763 0.0 37 0.001133006919435115 0.0 0.0 15.975559422166471 0.0 38 0.001133006919435115 0.0 0.0 16.355764172702624 0.0 39 0.0012948650507829888 0.0 0.0 16.914660300246833 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATAACG 35 1.2107012E-7 45.000004 1 TCACGAC 20 7.03075E-4 45.0 25 CTTCGTC 20 7.03075E-4 45.0 41 GTATGCG 20 7.03075E-4 45.0 1 CGCCCCG 20 7.03075E-4 45.0 25 TACGTGG 30 2.1638662E-6 44.999996 2 CGTTTTT 4530 0.0 43.013245 1 TACGGCT 225 0.0 41.0 7 CTACGAA 45 1.925764E-8 40.0 11 TGTAACG 45 1.925764E-8 40.0 1 ACAACGA 145 0.0 38.793106 13 TTGTACG 35 6.2435975E-6 38.57143 1 TTAACGG 35 6.2435975E-6 38.57143 2 ACGACCA 35 6.2435975E-6 38.57143 28 CACAACG 150 0.0 37.500004 12 CGAAACT 30 1.13931106E-4 37.499996 33 TTAAGCG 30 1.13931106E-4 37.499996 1 TACGAAG 30 1.13931106E-4 37.499996 1 ACGGAAT 30 1.13931106E-4 37.499996 5 TAGTACG 30 1.13931106E-4 37.499996 1 >>END_MODULE