##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935363.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 330923 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.678124518392497 31.0 31.0 34.0 30.0 34.0 2 31.725229131852426 33.0 31.0 34.0 30.0 34.0 3 31.83077332189059 33.0 31.0 34.0 30.0 34.0 4 35.59085648323024 37.0 35.0 37.0 33.0 37.0 5 35.62471934558795 37.0 35.0 37.0 33.0 37.0 6 35.575653550826026 37.0 35.0 37.0 33.0 37.0 7 35.87713758185439 37.0 35.0 37.0 35.0 37.0 8 35.68293832704285 37.0 35.0 37.0 35.0 37.0 9 37.4677130329412 39.0 37.0 39.0 35.0 39.0 10 36.87034143894501 39.0 37.0 39.0 32.0 39.0 11 36.86194673685419 39.0 37.0 39.0 33.0 39.0 12 36.88111735962747 39.0 35.0 39.0 33.0 39.0 13 36.7707261205779 39.0 35.0 39.0 33.0 39.0 14 37.728429272066315 39.0 37.0 41.0 33.0 41.0 15 37.89404786007621 40.0 37.0 41.0 33.0 41.0 16 37.852742178694136 39.0 36.0 41.0 33.0 41.0 17 37.870791694744696 39.0 36.0 41.0 33.0 41.0 18 37.83626100331497 39.0 36.0 41.0 33.0 41.0 19 37.75208734358144 39.0 36.0 41.0 33.0 41.0 20 37.815515996168294 39.0 36.0 41.0 33.0 41.0 21 37.758535973625285 39.0 36.0 41.0 33.0 41.0 22 37.85760735881156 39.0 36.0 41.0 33.0 41.0 23 37.86645836040408 39.0 36.0 41.0 34.0 41.0 24 37.85343418257419 39.0 36.0 41.0 33.0 41.0 25 37.606494562179115 39.0 36.0 41.0 33.0 41.0 26 37.68962266146505 39.0 36.0 41.0 33.0 41.0 27 37.68994902137355 39.0 36.0 41.0 33.0 41.0 28 37.59501152836158 39.0 36.0 41.0 33.0 41.0 29 37.533652843712886 39.0 36.0 41.0 33.0 41.0 30 37.42067490020337 39.0 36.0 41.0 33.0 41.0 31 37.440987782656386 39.0 36.0 41.0 33.0 41.0 32 37.43690526194916 39.0 36.0 41.0 33.0 41.0 33 37.39349637226787 39.0 36.0 41.0 33.0 41.0 34 37.38446103776407 40.0 36.0 41.0 33.0 41.0 35 37.37639571743276 40.0 36.0 41.0 33.0 41.0 36 37.3051072303829 39.0 35.0 41.0 33.0 41.0 37 37.21487173753411 39.0 35.0 41.0 32.0 41.0 38 37.16059022793822 39.0 35.0 41.0 32.0 41.0 39 37.11244911958371 39.0 35.0 41.0 32.0 41.0 40 37.039592291862455 39.0 35.0 41.0 32.0 41.0 41 36.924287523079386 39.0 35.0 41.0 32.0 41.0 42 36.990106459810896 39.0 35.0 41.0 32.0 41.0 43 36.917161998410506 39.0 35.0 41.0 32.0 41.0 44 36.76233141848708 39.0 35.0 41.0 31.0 41.0 45 36.746641968071124 39.0 35.0 41.0 31.0 41.0 46 36.63314124433781 39.0 35.0 40.0 31.0 41.0 47 36.57423328085385 39.0 35.0 40.0 31.0 41.0 48 36.52046548592875 39.0 35.0 40.0 31.0 41.0 49 36.45659564309522 39.0 35.0 40.0 31.0 41.0 50 36.34658817912324 39.0 35.0 40.0 31.0 41.0 51 35.079245020745006 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 7.0 12 4.0 13 6.0 14 7.0 15 10.0 16 15.0 17 38.0 18 62.0 19 133.0 20 255.0 21 399.0 22 629.0 23 947.0 24 1270.0 25 1698.0 26 2141.0 27 2678.0 28 3213.0 29 3895.0 30 4930.0 31 6490.0 32 8671.0 33 12339.0 34 21688.0 35 27521.0 36 26506.0 37 40123.0 38 72068.0 39 93143.0 40 33.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.98324987988142 21.13301281567011 24.913046237342222 12.970691067106246 2 30.140244105124154 26.26713767250992 25.610791634307677 17.98182658805825 3 30.913233592104504 25.473297413597724 27.513046841712423 16.100422152585345 4 28.095961900502537 25.25693288166734 28.489406901303326 18.157698316526805 5 25.325226714371624 29.03998815434406 25.854050640179132 19.780734491105182 6 24.820879781701482 34.631016883081564 25.90814177316173 14.63996156205522 7 77.18260743435785 6.015598794885819 11.412020318926155 5.389773451830184 8 76.29448542410168 7.1285465198852895 9.8436796475313 6.733288408481732 9 70.37347056566028 7.947165957035322 12.466948504637031 9.212414972667357 10 36.90072917264741 29.47996966061591 19.182407992191536 14.436893174545135 11 27.9497043118792 24.924529271159756 27.313906860508336 19.81185955645271 12 26.364139089758044 20.39900520664928 32.88499137261538 20.351864330977296 13 23.953004173176236 24.650447385041232 32.87864548550569 18.51790295627684 14 18.100283147439132 29.949565306732985 29.956213378943136 21.993938166884742 15 16.53103592074289 26.453585879494625 37.677042695732844 19.33833550402964 16 18.93068780350716 24.76497553811612 32.63024933292639 23.674087325450333 17 18.691961574142628 25.175342904542745 30.003958624816047 26.128736896498584 18 19.839660585695164 25.59658893458599 31.786850717538524 22.776899762180324 19 22.055583927378876 26.238732273066546 29.070811034591127 22.63487276496345 20 22.32120463068448 26.714069436092387 30.247822000888426 20.716903932334713 21 22.852143852195223 27.662628466440836 29.718695889980452 19.766531791383493 22 18.92222662069424 25.593567083581377 28.138267814567136 27.34593848115725 23 18.40518791380472 28.259746224952632 28.571903433729297 24.76316242751335 24 21.04507695143583 24.852911402350394 29.348216956814728 24.753794689399044 25 19.442589363688832 27.825506235589547 27.562605198188102 25.16929920253352 26 17.34663350688831 27.341405704650327 30.688105692260738 24.62385509620063 27 20.37996754532021 29.03364226723437 28.413558441087506 22.172831746357915 28 18.981757085485143 26.03808136636015 31.81767359778559 23.16248795036912 29 18.870250783414875 25.039359609335104 32.40723672878585 23.683152878464174 30 20.23673180770149 27.8321543077997 29.0898486959202 22.841265188578614 31 23.052190388700694 28.803679405783218 24.804259601176103 23.339870604339982 32 20.580316266926143 28.2271102341028 27.69949504869713 23.49307845027393 33 20.879177331282502 26.51734693569199 25.405003580893442 27.19847215213207 34 19.841473696297932 26.25202841748685 28.779806782846766 25.126691103368458 35 18.536940617605907 25.321902678266543 28.740220534686316 27.40093616944123 36 21.022110883800764 25.81537094732007 27.500052882392577 25.662465286486587 37 19.581292324800632 28.334385944766606 29.662791646395082 22.421530084037677 38 20.173877306805508 26.060745248894758 26.96216340357122 26.803214040728506 39 20.230083735491338 24.62445946640155 28.747472977097395 26.397983821009724 40 20.630781178703202 23.876249157659032 29.52771490648882 25.96525475714894 41 17.427921298912434 26.369276236465883 27.042242455193506 29.160560009428178 42 19.655629859514146 24.76134931691058 28.250680671938788 27.332340151636487 43 22.30669974586233 23.000214551421326 28.399355741365817 26.293729961350525 44 20.84019545332298 23.969019983500694 28.90612015483964 26.284664408336685 45 19.66499759762845 23.957234764582697 28.43350265771796 27.944264980070894 46 22.381037280575843 24.92936423276714 28.01165225747379 24.677946229183224 47 18.508535218162532 24.349471024981643 32.11290844093641 25.029085315919414 48 19.14282174403109 23.65142344291572 29.284153715516904 27.921601097536286 49 19.962347736482506 21.62920075062779 32.210816413485915 26.197635099403787 50 19.827875366777164 21.57178558154012 30.764256337577017 27.836082714105697 51 18.78714988078798 22.112092541165165 27.34049914934894 31.760258428697913 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 238.0 1 353.0 2 468.0 3 1060.5 4 1653.0 5 1140.0 6 627.0 7 608.0 8 589.0 9 630.5 10 672.0 11 634.0 12 596.0 13 635.0 14 674.0 15 748.5 16 823.0 17 711.0 18 599.0 19 682.5 20 766.0 21 986.0 22 1206.0 23 1270.5 24 1335.0 25 1624.0 26 2320.5 27 2728.0 28 3257.5 29 3787.0 30 4449.5 31 5112.0 32 5442.0 33 5772.0 34 7005.0 35 8238.0 36 8824.5 37 9411.0 38 10278.0 39 11145.0 40 12623.0 41 14101.0 42 16797.0 43 19493.0 44 22185.0 45 24877.0 46 32607.0 47 40337.0 48 41946.5 49 43556.0 50 40688.0 51 37820.0 52 30435.0 53 23050.0 54 19245.5 55 15441.0 56 13789.0 57 12137.0 58 11532.0 59 10927.0 60 10119.0 61 9311.0 62 8386.5 63 7462.0 64 6178.5 65 4895.0 66 4056.0 67 3217.0 68 2481.5 69 1746.0 70 1803.5 71 1861.0 72 1531.5 73 1202.0 74 901.5 75 452.0 76 303.0 77 192.5 78 82.0 79 73.0 80 64.0 81 58.5 82 53.0 83 31.0 84 9.0 85 7.5 86 6.0 87 4.5 88 3.0 89 9.0 90 15.0 91 7.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 330923.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.962420312584445 #Duplication Level Percentage of deduplicated Percentage of total 1 67.66393648321082 21.627031778804007 2 13.418820410293788 8.577959561057938 3 4.951881333322139 4.748223375410498 4 2.486998932037097 3.179620207308733 5 1.4863566783285984 2.3753778443577764 6 1.0404249682272053 1.9952700082911148 7 0.7966977716198577 1.782507232702931 8 0.6773368901179245 1.731946110013434 9 0.5201859737179023 1.4963762459414338 >10 6.766393694435919 42.29780747419339 >50 0.12532200495200002 2.747329246397534 >100 0.0566932879544762 3.314470576595775 >500 0.0029838572607619055 0.6990716284226078 >1k 0.005967714521523811 3.4270087105028253 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 2353 0.7110415413857605 RNA PCR Primer, Index 7 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 1933 0.5841237991919571 Illumina PCR Primer Index 3 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGC 1914 0.5783822822831898 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCG 1733 0.5236867790996697 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTC 1542 0.4659694249115353 No Hit CTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGCT 1305 0.3943515561021748 TruSeq Adapter, Index 7 (95% over 24bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 926 0.2798234030272903 No Hit TCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 767 0.2317759720539219 Illumina PCR Primer Index 3 (95% over 22bp) ACTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTGC 506 0.15290566083348694 TruSeq Adapter, Index 7 (95% over 23bp) CGCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTG 487 0.14716414392471963 TruSeq Adapter, Index 7 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCC 398 0.12026966998365178 No Hit ACCTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCTTCTG 371 0.112110672271193 TruSeq Adapter, Index 7 (95% over 22bp) GAATGACTGTCTCTTATACACATCTGACGCTAGTCACCTCGTATGCCGTCT 364 0.10999537656796293 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTAGTCACCT 340 0.10274293415688845 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.41913073434001263 0.0 2 0.0 0.0 0.0 2.207159973770333 0.0 3 0.0 0.0 0.0 2.9535571719100817 0.0 4 0.0 0.0 0.0 3.8156912635265607 0.0 5 0.0 0.0 0.0 6.271247389876195 0.0 6 0.0 0.0 0.0 7.496003602046398 0.0 7 0.0 0.0 0.0 8.797817014834267 0.0 8 0.0 0.0 0.0 10.77350320165114 0.0 9 0.0 0.0 0.0 11.51597199348489 0.0 10 0.0 0.0 0.0 13.624317439404333 0.0 11 0.0 0.0 0.0 15.805489494534983 0.0 12 0.0 0.0 0.0 18.209674153806173 0.0 13 0.0 0.0 0.0 19.007442819024366 0.0 14 0.0 0.0 0.0 19.373388975683167 0.0 15 0.0 0.0 0.0 19.953886553669584 0.0 16 3.0218510046143665E-4 0.0 0.0 21.022715254001685 0.0 17 3.0218510046143665E-4 0.0 0.0 22.30428226505864 0.0 18 3.0218510046143665E-4 0.0 0.0 23.830619207489356 0.0 19 3.0218510046143665E-4 0.0 0.0 24.724180549553825 0.0 20 3.0218510046143665E-4 0.0 0.0 25.549145873813547 0.0 21 3.0218510046143665E-4 0.0 0.0 26.443311586078938 0.0 22 3.0218510046143665E-4 0.0 0.0 27.419067275468915 0.0 23 3.0218510046143665E-4 0.0 0.0 28.358862937903982 0.0 24 3.0218510046143665E-4 0.0 0.0 29.05902581567313 0.0 25 3.0218510046143665E-4 0.0 0.0 29.736222625807212 0.0 26 3.0218510046143665E-4 0.0 0.0 30.317626759095017 0.0 27 3.0218510046143665E-4 0.0 0.0 30.9407324362465 0.0 28 3.0218510046143665E-4 0.0 0.0 31.529389011945376 0.0 29 3.0218510046143665E-4 0.0 0.0 32.13557232347102 0.0 30 6.043702009228733E-4 0.0 0.0 32.872299598396005 0.0 31 9.0655530138431E-4 0.0 0.0 33.46276928469765 0.0 32 9.0655530138431E-4 0.0 0.0 34.0876880724519 0.0 33 9.0655530138431E-4 0.0 0.0 34.6965910498817 0.0 34 9.0655530138431E-4 0.0 0.0 35.30579621241195 0.0 35 9.0655530138431E-4 0.0 0.0 35.95549417840404 0.0 36 9.0655530138431E-4 0.0 0.0 36.54173327329923 0.0 37 0.0012087404018457466 0.0 0.0 37.14912532522671 0.0 38 0.0012087404018457466 0.0 0.0 37.692151950755914 0.0 39 0.0012087404018457466 0.0 0.0 38.28503911786125 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTACT 25 3.8847662E-5 45.0 6 CGACGGT 20 7.0259976E-4 45.0 28 CTAAGCG 20 7.0259976E-4 45.0 1 CACGACG 20 7.0259976E-4 45.0 26 GCGCATG 25 3.8847662E-5 45.0 1 TGCGGAA 20 7.0259976E-4 45.0 4 GCGTTAG 55 1.8189894E-12 45.0 1 CGGTCTA 20 7.0259976E-4 45.0 31 CGCACGG 25 3.8847662E-5 45.0 2 GGTCTAA 20 7.0259976E-4 45.0 32 TAGTGCG 40 6.7902874E-9 45.0 1 TGAGCGG 45 3.8380676E-10 45.0 2 ATCATCG 25 3.8847662E-5 45.0 10 TAATGCG 20 7.0259976E-4 45.0 1 TAGTATG 20 7.0259976E-4 45.0 1 ACGGTCT 25 3.8847662E-5 45.0 30 CTAGCGC 20 7.0259976E-4 45.0 38 ACGAAAG 35 1.2084274E-7 45.0 1 CGAAAGG 60 0.0 44.999996 2 CGTTAGG 100 0.0 42.75 2 >>END_MODULE