##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935362.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 591750 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.79099281791297 33.0 31.0 34.0 30.0 34.0 2 31.87916518800169 33.0 31.0 34.0 30.0 34.0 3 31.910546683565695 33.0 31.0 34.0 30.0 34.0 4 35.64662779890156 37.0 35.0 37.0 33.0 37.0 5 35.63594592310942 37.0 35.0 37.0 33.0 37.0 6 35.540616814533166 37.0 35.0 37.0 33.0 37.0 7 35.82786142796789 37.0 35.0 37.0 35.0 37.0 8 35.55429995775243 37.0 35.0 37.0 33.0 37.0 9 37.39416645542881 39.0 37.0 39.0 34.0 39.0 10 36.97779129700042 39.0 37.0 39.0 32.0 39.0 11 36.92934854245881 39.0 37.0 39.0 33.0 39.0 12 36.94610054921842 39.0 37.0 39.0 33.0 39.0 13 36.842867765103506 39.0 37.0 39.0 33.0 39.0 14 37.898654837346854 40.0 37.0 41.0 33.0 41.0 15 37.92143134769751 40.0 37.0 41.0 32.0 41.0 16 37.97576679340938 40.0 37.0 41.0 33.0 41.0 17 37.892821292775665 40.0 37.0 41.0 33.0 41.0 18 37.62517279256443 39.0 37.0 40.0 33.0 41.0 19 37.279442332065905 38.0 36.0 40.0 33.0 41.0 20 36.927379805661175 38.0 35.0 40.0 32.0 41.0 21 37.027922264469794 38.0 35.0 40.0 32.0 41.0 22 37.158403041825096 39.0 35.0 40.0 33.0 41.0 23 37.164814533164346 39.0 35.0 40.0 33.0 41.0 24 37.10969328263625 39.0 35.0 41.0 33.0 41.0 25 36.89830502746092 38.0 35.0 40.0 32.0 41.0 26 36.88509505703422 38.0 35.0 40.0 33.0 41.0 27 36.90667173637516 38.0 35.0 40.0 33.0 41.0 28 36.72897338403042 38.0 35.0 40.0 32.0 41.0 29 36.589284326151244 38.0 35.0 40.0 32.0 41.0 30 36.39120405576679 38.0 35.0 40.0 31.0 41.0 31 36.18237600337981 38.0 35.0 40.0 30.0 41.0 32 35.792217997465144 38.0 35.0 40.0 29.0 41.0 33 35.2182594000845 38.0 35.0 40.0 24.0 41.0 34 34.779143219264895 38.0 35.0 40.0 21.0 41.0 35 34.52051880016899 38.0 34.0 40.0 18.0 41.0 36 34.33084579636671 38.0 34.0 40.0 18.0 41.0 37 34.248991972961555 38.0 34.0 40.0 16.0 41.0 38 34.03937980566118 38.0 34.0 40.0 15.0 41.0 39 33.91305111956063 38.0 34.0 40.0 15.0 41.0 40 33.72014533164343 38.0 33.0 40.0 15.0 41.0 41 33.548697929869036 38.0 33.0 40.0 13.0 41.0 42 33.616508660752004 38.0 33.0 40.0 13.0 41.0 43 33.57721166032953 38.0 33.0 40.0 12.0 41.0 44 33.43209801436417 38.0 33.0 40.0 12.0 41.0 45 33.45645627376426 38.0 33.0 40.0 12.0 41.0 46 33.33476468103084 37.0 33.0 40.0 12.0 41.0 47 33.2158783269962 37.0 33.0 40.0 12.0 41.0 48 33.1674085340093 37.0 33.0 40.0 12.0 41.0 49 33.11745162653148 37.0 33.0 40.0 12.0 41.0 50 33.00081115335868 37.0 32.0 40.0 10.0 41.0 51 31.904466413181243 35.0 30.0 39.0 10.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 4.0 9 5.0 10 4.0 11 3.0 12 3.0 13 8.0 14 27.0 15 28.0 16 62.0 17 122.0 18 335.0 19 596.0 20 1223.0 21 1965.0 22 3030.0 23 4254.0 24 6371.0 25 10052.0 26 15602.0 27 17721.0 28 16600.0 29 14615.0 30 14281.0 31 15788.0 32 18910.0 33 24346.0 34 37059.0 35 41427.0 36 49101.0 37 61313.0 38 104924.0 39 131916.0 40 53.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.94862695395015 16.297422898183356 19.142205323193917 24.61174482467258 2 39.99594423320659 28.138572032108154 19.151837769328264 12.713645965356992 3 23.363413603717788 28.236586396282213 36.23236163920575 12.167638360794255 4 21.000591465990706 19.452978453738908 44.74575411913815 14.800675961132233 5 25.208280523869874 22.23675538656527 35.774228981833545 16.780735107731306 6 20.04630333755809 30.956653992395438 36.22610899873257 12.7709336713139 7 63.09742289818335 4.054921841994085 28.67984790874525 4.167807351077313 8 62.74490916772285 8.282382762991128 23.921419518377693 5.051288550908323 9 57.556231516687795 5.227038445289396 24.62391212505281 12.592817912970004 10 32.989607097591886 23.37220109843684 30.06269539501479 13.575496408956486 11 24.62661596958175 19.96062526404732 37.66489226869455 17.747866497676384 12 20.846810308407264 17.222306717363754 41.90637938318547 20.024503591043516 13 21.261681453316434 18.334431770173214 45.13003802281369 15.273848753696662 14 16.756907477820025 25.035910435149976 40.5433037600338 17.663878326996198 15 15.03844528939586 22.36147021546261 45.05399239543726 17.546092099704268 16 18.663455851288553 23.790283058724125 37.45703422053232 20.089226869455008 17 18.47266582171525 24.38783269961977 37.99002957329953 19.14947190536544 18 18.699450781580058 23.346176594845797 37.682805238698776 20.271567384875368 19 17.97853823405154 25.164174059991552 35.363075623151666 21.494212082805237 20 19.173637515842838 25.668103084072662 38.238952260245036 16.91930713983946 21 18.670891423743136 26.27275031685678 39.18073510773131 15.87562315166878 22 17.611153358681875 20.319898605830165 40.94076890578792 21.128179129700044 23 18.233882551753275 23.815631601182933 39.8653147444022 18.085171102661597 24 20.049514152936208 23.569074778200253 37.04554288128433 19.335868187579212 25 18.845458386142795 28.07182087029996 34.5723700887199 18.510350654837346 26 17.721504013519223 22.905111956062527 36.61596958174905 22.757414448669202 27 20.71128010139417 22.520321081537812 35.405154203633295 21.36324461343473 28 16.91254752851711 24.958174904942965 36.70519645120406 21.42408111533587 29 18.81301225179552 25.67790452049007 34.99112801013942 20.51795521757499 30 18.032108153781156 25.778115758343894 35.86142796789184 20.3283481199831 31 19.998310097169416 25.147613012251796 33.776256865230245 21.077820025348544 32 23.542374313476973 24.992479932403885 33.428474862695396 18.036670891423743 33 20.915927334178285 22.10190114068441 35.979552175749895 21.002619349387412 34 18.67528517110266 24.69302915082383 37.78555133079848 18.846134347275033 35 19.269455006337136 23.797042670046473 33.25982256020279 23.673679763413606 36 22.098352344740178 27.560963244613433 31.537980566117447 18.80270384452894 37 21.021715251373045 24.49243768483312 33.813941698352345 20.671905365441486 38 20.32682720743557 25.775411913814956 31.990198563582595 21.907562315166878 39 23.61977186311787 23.300211237853823 32.53096746937051 20.549049429657796 40 21.084410646387834 23.064469792986902 35.13206590621039 20.71905365441487 41 19.93747359526827 25.821208280523873 33.16670891423743 21.074609209970426 42 19.545754119138152 24.852217997465146 34.572032108153785 21.029995775242924 43 22.979467680608366 23.65711871567385 31.836417405999157 21.52699619771863 44 21.38149556400507 23.294972539079005 32.03143219264892 23.292099704267006 45 20.007942543303763 22.58538234051542 31.23599493029151 26.17068018588931 46 23.775580904098014 24.066582171525138 30.8871989860583 21.270637938318547 47 18.747613012251797 23.365779467680607 36.63168567807351 21.254921841994083 48 19.30612589776088 24.597380650612592 32.705534431770175 23.390959019856357 49 19.116011829319817 22.128770595690746 36.450528094634564 22.30468948035488 50 19.043514997887623 22.346430080270384 36.13722010984368 22.47283481199831 51 18.5346852555978 22.00929446556823 33.69260667511618 25.763413603717787 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 388.0 1 619.0 2 850.0 3 15163.5 4 29477.0 5 19152.5 6 8828.0 7 8538.0 8 8248.0 9 8182.0 10 8116.0 11 8065.5 12 8015.0 13 7714.0 14 7413.0 15 7034.5 16 6656.0 17 6221.5 18 5787.0 19 5357.5 20 4928.0 21 4844.0 22 4760.0 23 4497.0 24 4234.0 25 4310.0 26 4902.5 27 5419.0 28 5921.0 29 6423.0 30 7034.5 31 7646.0 32 8713.0 33 9780.0 34 11132.0 35 12484.0 36 13323.0 37 14162.0 38 15380.0 39 16598.0 40 18417.0 41 20236.0 42 21687.5 43 23139.0 44 26260.5 45 29382.0 46 58090.5 47 86799.0 48 68407.5 49 50016.0 50 49134.0 51 48252.0 52 41282.5 53 34313.0 54 31010.5 55 27708.0 56 25678.0 57 23648.0 58 22188.0 59 20728.0 60 18162.5 61 15597.0 62 13857.5 63 12118.0 64 10501.5 65 8885.0 66 7261.0 67 5637.0 68 4781.0 69 3925.0 70 3310.5 71 2696.0 72 2208.5 73 1721.0 74 1436.5 75 915.0 76 678.0 77 483.5 78 289.0 79 203.5 80 118.0 81 97.0 82 76.0 83 49.5 84 23.0 85 15.5 86 8.0 87 5.0 88 2.0 89 2.5 90 3.0 91 3.0 92 3.0 93 1.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 591750.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.77526950844973 #Duplication Level Percentage of deduplicated Percentage of total 1 74.02511181603614 33.885194437721815 2 10.202227950841502 9.340194680728173 3 4.8953986499778495 6.722645776621111 4 3.109794378568793 5.694067031793939 5 2.1586982360027167 4.940749677021969 6 1.5034388791254443 4.129219192886929 7 1.0879688952468887 3.4861448577715657 8 0.8284102826987525 3.0336563163285146 9 0.5631724987705256 2.32014356198711 >10 1.5679811796052447 10.200093389693857 >50 0.03112158727179416 0.9565164987701947 >100 0.019265744228121322 1.8970910345266045 >500 0.0018524754065501268 0.5586463318192952 >1k 0.0037049508131002536 3.2823439909018335 >5k 0.001111485243930076 3.3718902153100263 >10k+ 7.409901626200506E-4 6.181403006117082 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19121 3.231263202365864 No Hit GAATCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTC 17327 2.928094634558513 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCG 7511 1.2692860160540769 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGC 7057 1.1925644275454161 No Hit GAACTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTCT 5314 0.8980143641740599 No Hit GAATGCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTT 3724 0.6293198141106886 No Hit GCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTCTGC 2879 0.48652302492606675 No Hit CGTTTCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTT 2414 0.40794254330376 No Hit GAATGACTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCT 1742 0.2943810730882974 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTC 1678 0.2835656949725391 No Hit CGCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTCTG 1603 0.2708914237431348 No Hit CGTTCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTC 1592 0.26903253062948884 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCT 1424 0.24064216307562317 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACAGTTCGT 1270 0.21461765948457964 No Hit CGTCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCCGTCTTCT 1028 0.1737220109843684 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACAGTTCGTCGTA 867 0.14651457541191382 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACAGTTCGTCGTATGCC 755 0.12758766370933672 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.6899028305872413E-4 0.0 0.0 0.08043937473595268 0.0 2 1.6899028305872413E-4 0.0 0.0 0.7386565272496831 0.0 3 3.3798056611744826E-4 0.0 0.0 1.1685678073510772 0.0 4 3.3798056611744826E-4 0.0 0.0 2.4929446556822983 0.0 5 3.3798056611744826E-4 0.0 0.0 6.335952682720744 0.0 6 3.3798056611744826E-4 0.0 0.0 8.385466835656949 0.0 7 3.3798056611744826E-4 0.0 0.0 9.674862695395015 0.0 8 3.3798056611744826E-4 0.0 0.0 11.08998732572877 0.0 9 3.3798056611744826E-4 0.0 0.0 11.876637093367131 0.0 10 3.3798056611744826E-4 0.0 0.0 14.0397127165188 0.0 11 3.3798056611744826E-4 0.0 0.0 14.853400929446558 0.0 12 3.3798056611744826E-4 0.0 0.0 16.71634980988593 0.0 13 3.3798056611744826E-4 0.0 0.0 17.217574989438106 0.0 14 3.3798056611744826E-4 0.0 0.0 17.604055766793408 0.0 15 3.3798056611744826E-4 0.0 0.0 17.98394592310942 0.0 16 3.3798056611744826E-4 0.0 0.0 18.31263202365864 0.0 17 3.3798056611744826E-4 0.0 0.0 18.67782002534854 0.0 18 3.3798056611744826E-4 0.0 0.0 19.053654414871144 0.0 19 3.3798056611744826E-4 0.0 0.0 19.5389945078158 0.0 20 3.3798056611744826E-4 0.0 0.0 19.832699619771862 0.0 21 3.3798056611744826E-4 0.0 0.0 20.084495141529363 0.0 22 3.3798056611744826E-4 0.0 0.0 20.39036755386565 0.0 23 3.3798056611744826E-4 0.0 0.0 20.66125897760879 0.0 24 3.3798056611744826E-4 0.0 0.0 20.914406421630755 0.0 25 3.3798056611744826E-4 0.0 0.0 21.148964934516265 0.0 26 3.3798056611744826E-4 0.0 0.0 21.418166455428814 0.0 27 3.3798056611744826E-4 0.0 0.0 21.731981411068862 0.0 28 3.3798056611744826E-4 0.0 0.0 21.978369243768483 0.0 29 3.3798056611744826E-4 0.0 0.0 22.23422053231939 0.0 30 3.3798056611744826E-4 0.0 0.0 22.580650612589775 0.0 31 3.3798056611744826E-4 0.0 0.0 22.869792986903253 0.0 32 3.3798056611744826E-4 0.0 0.0 23.175665399239545 0.0 33 3.3798056611744826E-4 0.0 0.0 23.46227291930714 0.0 34 3.3798056611744826E-4 0.0 0.0 23.79095901985636 0.0 35 5.069708491761723E-4 0.0 0.0 24.106463878326995 0.0 36 5.069708491761723E-4 0.0 0.0 24.39476130122518 0.0 37 6.759611322348965E-4 0.0 0.0 24.70063371356147 0.0 38 6.759611322348965E-4 0.0 0.0 25.061427967891845 0.0 39 6.759611322348965E-4 0.0 0.0 25.589015631601182 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTATC 20 7.030509E-4 45.000004 45 CGGTCTA 40 6.8048394E-9 45.000004 31 CGCTTAT 20 7.030509E-4 45.000004 31 TTAAGCG 30 2.1637097E-6 44.999996 1 CGTTTTT 9225 0.0 44.26829 1 CCGATGA 585 0.0 40.769234 18 TAGCCGT 50 1.0804797E-9 40.5 44 GTAGCCG 50 1.0804797E-9 40.5 43 CGATGAA 600 0.0 40.125004 19 TCACGAC 45 1.9255822E-8 40.0 25 CGACGGT 45 1.9255822E-8 40.0 28 CGTTAGG 45 1.9255822E-8 40.0 2 GTTTTTT 10285 0.0 39.90277 2 GCGAACC 40 3.4544246E-7 39.375004 33 GTTACGG 40 3.4544246E-7 39.375004 2 AAGCACG 40 3.4544246E-7 39.375004 1 CGTTTTC 180 0.0 38.75 1 CGTTTCT 320 0.0 38.67188 1 TACGGCT 955 0.0 38.63874 7 GCCGATG 35 6.2431536E-6 38.571426 9 >>END_MODULE