SRR2935361.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935361.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	395354
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGC	5543	1.402034632253626	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTC	5408	1.3678880193446885	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCG	5296	1.3395589775239405	No Hit
GCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC	2655	0.671550053875767	No Hit
CCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC	1567	0.39635364761707226	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1490	0.37687743136530805	No Hit
CTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGCT	1425	0.3604364695943382	No Hit
GAATGCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTT	1380	0.34905426529135913	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCT	1157	0.29264911952326267	No Hit
GAACTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCT	1080	0.27317290327149846	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTGCCATT	1011	0.25572019000693047	No Hit
TCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC	947	0.23953216610936023	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTGCCATTCGTA	874	0.2210677013511941	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTC	789	0.19956798211223362	No Hit
ACTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC	624	0.15783323300131022	No Hit
CGCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTG	596	0.15075097254612324	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCC	459	0.11609848389038684	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	428	0.10825740981500125	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTAAGG	65	0.0	45.000004	2
GTTTGCG	20	7.0276676E-4	45.0	1
CTTCGCT	20	7.0276676E-4	45.0	2
ACGCCTA	20	7.0276676E-4	45.0	30
CGTATGG	35	1.2092278E-7	45.0	2
CAACGAG	20	7.0276676E-4	45.0	14
GCGAACG	40	6.7957444E-9	45.0	1
TCTTCGC	20	7.0276676E-4	45.0	1
TAGCGGA	20	7.0276676E-4	45.0	3
CCTACCG	35	1.2092278E-7	45.0	23
TAAGTAG	20	7.0276676E-4	45.0	1
ATATGCG	25	3.886147E-5	45.0	1
CGACAGG	40	6.7957444E-9	45.0	2
CGCTCCA	20	7.0276676E-4	45.0	12
CGCTAGG	20	7.0276676E-4	45.0	2
CTGTTCG	20	7.0276676E-4	45.0	13
AGCGACT	20	7.0276676E-4	45.0	19
CGATGTA	20	7.0276676E-4	45.0	10
CGGTAGT	20	7.0276676E-4	45.0	29
GGTTCCG	20	7.0276676E-4	45.0	9