##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935361.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 395354 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.457202911820797 31.0 31.0 34.0 30.0 34.0 2 31.499564946857753 31.0 31.0 34.0 30.0 34.0 3 31.591710214137205 31.0 31.0 34.0 30.0 34.0 4 35.3954481300303 37.0 35.0 37.0 33.0 37.0 5 35.408942365576166 37.0 35.0 37.0 33.0 37.0 6 35.363193492414396 37.0 35.0 37.0 33.0 37.0 7 35.62967113017701 37.0 35.0 37.0 33.0 37.0 8 35.462790309444195 37.0 35.0 37.0 33.0 37.0 9 37.20538555320042 39.0 37.0 39.0 34.0 39.0 10 36.431863595663636 39.0 35.0 39.0 32.0 39.0 11 36.54435771485808 38.0 35.0 39.0 32.0 39.0 12 36.63207909873177 39.0 35.0 39.0 32.0 39.0 13 36.55812259392848 39.0 35.0 39.0 32.0 39.0 14 37.517796708772394 39.0 36.0 41.0 32.0 41.0 15 37.61926526606535 39.0 36.0 41.0 32.0 41.0 16 37.6109132574857 39.0 36.0 41.0 33.0 41.0 17 37.557406779746756 39.0 36.0 41.0 32.0 41.0 18 37.529429321570035 39.0 36.0 40.0 32.0 41.0 19 37.43012844185211 39.0 36.0 40.0 32.0 41.0 20 37.39185641222803 39.0 36.0 40.0 32.0 41.0 21 37.42025880603206 39.0 36.0 40.0 32.0 41.0 22 37.54131234286235 39.0 36.0 40.0 33.0 41.0 23 37.587832676537985 39.0 36.0 41.0 33.0 41.0 24 37.608796167485345 39.0 36.0 41.0 33.0 41.0 25 37.30800750719608 39.0 35.0 40.0 32.0 41.0 26 37.4327615251142 39.0 36.0 41.0 33.0 41.0 27 37.40565164384324 39.0 36.0 41.0 33.0 41.0 28 37.0618812507272 39.0 35.0 41.0 31.0 41.0 29 36.81754073564451 39.0 35.0 41.0 31.0 41.0 30 36.762390161728476 39.0 35.0 40.0 31.0 41.0 31 36.79332952240271 39.0 35.0 40.0 31.0 41.0 32 36.85773762248517 39.0 35.0 40.0 31.0 41.0 33 36.7632703855279 39.0 35.0 41.0 31.0 41.0 34 36.70827663309338 39.0 35.0 41.0 31.0 41.0 35 36.70685259286614 39.0 35.0 41.0 31.0 41.0 36 36.57607106542491 39.0 35.0 41.0 30.0 41.0 37 36.57060254860201 39.0 35.0 41.0 30.0 41.0 38 36.44063548111313 39.0 35.0 40.0 30.0 41.0 39 36.45256403122265 39.0 35.0 40.0 30.0 41.0 40 36.40061818016259 39.0 35.0 40.0 30.0 41.0 41 36.21725339822033 39.0 35.0 40.0 30.0 41.0 42 36.24798282045964 39.0 35.0 40.0 30.0 41.0 43 36.13424171754934 39.0 35.0 40.0 29.0 41.0 44 36.026624240554035 39.0 35.0 40.0 29.0 41.0 45 36.074515497503505 39.0 35.0 40.0 29.0 41.0 46 35.921257910631994 39.0 35.0 40.0 29.0 41.0 47 35.93869038886669 39.0 35.0 40.0 29.0 41.0 48 35.88230041937099 38.0 35.0 40.0 29.0 41.0 49 35.679188777652435 39.0 35.0 40.0 27.0 41.0 50 35.485693833880525 38.0 35.0 40.0 27.0 41.0 51 34.26696580785828 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 2.0 12 5.0 13 4.0 14 14.0 15 15.0 16 27.0 17 44.0 18 110.0 19 256.0 20 484.0 21 868.0 22 1327.0 23 1842.0 24 2433.0 25 3198.0 26 4158.0 27 4866.0 28 5312.0 29 5969.0 30 7246.0 31 9453.0 32 12243.0 33 16461.0 34 25514.0 35 32133.0 36 33710.0 37 48727.0 38 84538.0 39 94362.0 40 29.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.67466624847605 21.35630346474299 25.389397856098583 10.579632430682375 2 29.263647262959267 29.816063578463858 24.751488539384955 16.168800619191913 3 27.146810200478562 28.952533678677845 28.838458697774655 15.062197423068946 4 25.1658007760134 24.103461707735345 33.45735720392357 17.273380312327685 5 26.23876323497423 27.823419011822313 26.838984808551324 19.098832944652134 6 22.29799116740946 35.923754407442445 27.09723437729225 14.681020047855844 7 74.85266368874477 5.008928706931004 14.942557808950966 5.1958497953732605 8 74.91918634944885 8.261962696722431 10.563950282531605 6.254900671297116 9 68.953140729574 7.098448479084567 12.39699105105804 11.551419740283391 10 34.638577072699405 28.913075370427517 20.786687373847236 15.661660183025845 11 25.01074985961948 27.197144837285066 28.55567415531397 19.23643114778148 12 22.669051027686578 20.699170869650995 35.4548075901597 21.17697051250272 13 23.79462456431451 25.80168658973983 34.675506002215734 15.728182843729924 14 18.182691967199016 33.21200746672602 29.660759724196545 18.944540841878418 15 15.135549406354812 27.074469968686294 39.52179565655084 18.26818496840806 16 17.03207758110453 28.378617643934295 30.04016653429585 24.54913824066533 17 17.91204844266151 26.30123888970391 28.703389873379297 27.083322794255277 18 22.092099738462238 25.345133728253664 30.626729462709367 21.936037070574727 19 21.418273243725878 28.584762010754915 27.901070938955975 22.095893806563232 20 19.6644020295735 27.550499046424214 31.064817859437365 21.720281064564922 21 20.07441432235414 30.87258507565372 30.303221922631362 18.749778679360777 22 16.94456107690829 27.37217784567754 29.349393202041714 26.33386787537245 23 15.478280224811181 28.99831543376316 29.284135230704635 26.239269110721025 24 18.68654421101089 25.678252907520854 28.98693322946018 26.64826965200807 25 15.3583876728198 32.72586087405212 26.894884078572623 25.02086737455546 26 15.93761540290474 28.990727297561175 28.82935293433227 26.242304365201818 27 20.359222367802023 28.153755874482112 27.074217030812893 24.41280472690298 28 18.106810605179156 26.269368717655567 33.3344293974514 22.289391279713875 29 20.106031556529086 26.309585839526093 30.10694213287332 23.477440471071496 30 22.618463453006672 28.26125447067691 28.133014968863346 20.987267107453068 31 20.470262094224417 29.26010613273168 26.55620026609064 23.71343150695326 32 22.046317983376923 31.884842444998657 25.169341906240987 20.89949766538343 33 20.143719299665616 25.07120201136197 27.673426852896394 27.11165183607602 34 19.55867399849249 27.290478912569494 27.511293676047288 25.639553412890727 35 19.74028339159336 29.18751296306601 25.6534649959277 25.41873864941293 36 19.102879950626527 27.559098934119802 31.697668418683 21.64035269657067 37 20.606595607986765 27.36990140481695 30.98564830506331 21.037854682132977 38 18.398953848955617 27.083828670002074 27.975940549482235 26.54127693156007 39 23.473140527223705 22.83649589987707 28.08950965463863 25.600853918260597 40 21.115253671393234 25.234346939704672 27.9964285172276 25.6539708716745 41 17.176505106815664 26.64675202476768 28.004522529176384 28.17222033924028 42 20.213783090597286 27.04209392089115 30.861455809224136 21.882667179287424 43 21.29003374191231 25.1088897544985 30.518472052894367 23.08260445069482 44 20.159148509942987 23.533845616839592 28.894357967795948 27.412647905421473 45 19.3365945456477 23.010770094649352 26.860990403537084 30.791644956165864 46 23.282931246427253 26.304021206311308 26.2526748180112 24.16037272925024 47 16.725011002797494 24.261042002863256 33.02255699954977 25.991389994789483 48 19.637843552866546 23.863170728005787 29.38404569069745 27.11494002843022 49 20.55651390905366 20.30939360674231 34.492378981874474 24.64171350232956 50 20.094649352226106 20.334181518335466 32.6780556159796 26.89311351345882 51 19.809841306778228 21.071242481421713 27.461211977114182 31.657704234685873 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 268.0 1 327.5 2 387.0 3 1400.0 4 2413.0 5 1685.5 6 958.0 7 955.5 8 953.0 9 985.0 10 1017.0 11 1075.5 12 1134.0 13 1144.5 14 1155.0 15 1156.5 16 1158.0 17 1140.5 18 1123.0 19 1173.0 20 1223.0 21 1231.5 22 1240.0 23 1346.5 24 1453.0 25 1830.0 26 2297.0 27 2387.0 28 3090.5 29 3794.0 30 4414.0 31 5034.0 32 6110.5 33 7187.0 34 8614.0 35 10041.0 36 11097.0 37 12153.0 38 13127.5 39 14102.0 40 16033.0 41 17964.0 42 21625.5 43 25287.0 44 28490.5 45 31694.0 46 48304.5 47 64915.0 48 59992.0 49 55069.0 50 50636.0 51 46203.0 52 36868.0 53 27533.0 54 22407.0 55 17281.0 56 14576.5 57 11872.0 58 10575.0 59 9278.0 60 8243.0 61 7208.0 62 5777.0 63 4346.0 64 3311.0 65 2276.0 66 1706.5 67 1137.0 68 884.5 69 632.0 70 598.0 71 564.0 72 426.0 73 288.0 74 224.0 75 129.5 76 99.0 77 92.5 78 86.0 79 63.0 80 40.0 81 27.5 82 15.0 83 11.5 84 8.0 85 5.5 86 3.0 87 3.5 88 4.0 89 3.5 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 395354.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.39493108495501 #Duplication Level Percentage of deduplicated Percentage of total 1 77.89880065312894 35.36210687249437 2 10.54294353006299 9.571923899595635 3 3.636269689438899 4.952046358751687 4 1.8008159145490932 3.269916573505853 5 1.061348208757132 2.408991439683523 6 0.7443686346739466 2.027433772369552 7 0.521980249807777 1.6586680227412147 8 0.43000814459962955 1.5616152072055642 9 0.33414765411023095 1.3651748757479987 >10 2.926445775350816 25.266326406844737 >50 0.0598220400581443 1.86565452364694 >100 0.03410415367800748 2.608769262490395 >500 0.0027954224326235642 0.9720387465062954 >1k 0.004472675892197703 2.9859101442941425 >5k 0.0016772534595741384 4.123423894122136 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGC 5543 1.402034632253626 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTC 5408 1.3678880193446885 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCG 5296 1.3395589775239405 No Hit GCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC 2655 0.671550053875767 No Hit CCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC 1567 0.39635364761707226 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1490 0.37687743136530805 No Hit CTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGCT 1425 0.3604364695943382 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTT 1380 0.34905426529135913 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCT 1157 0.29264911952326267 No Hit GAACTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCT 1080 0.27317290327149846 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTGCCATT 1011 0.25572019000693047 No Hit TCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC 947 0.23953216610936023 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTGCCATTCGTA 874 0.2210677013511941 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTC 789 0.19956798211223362 No Hit ACTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTGC 624 0.15783323300131022 No Hit CGCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCCGTCTTCTG 596 0.15075097254612324 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTGCCATTCGTATGCC 459 0.11609848389038684 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 428 0.10825740981500125 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.529378733995356E-4 0.0 0.0 0.3821891267066983 0.0 2 2.529378733995356E-4 0.0 0.0 1.9567273886188075 0.0 3 2.529378733995356E-4 0.0 0.0 2.6892354699838625 0.0 4 2.529378733995356E-4 0.0 0.0 3.8003915478280224 0.0 5 2.529378733995356E-4 0.0 0.0 7.205188261659171 0.0 6 2.529378733995356E-4 0.0 0.0 8.859907829438933 0.0 7 2.529378733995356E-4 0.0 0.0 10.350976593129195 0.0 8 2.529378733995356E-4 0.0 0.0 12.411914385588611 0.0 9 2.529378733995356E-4 0.0 0.0 13.121910996221109 0.0 10 2.529378733995356E-4 0.0 0.0 16.191059152051075 0.0 11 2.529378733995356E-4 0.0 0.0 18.613698103471826 0.0 12 2.529378733995356E-4 0.0 0.0 21.92844893437274 0.0 13 2.529378733995356E-4 0.0 0.0 22.933371105389096 0.0 14 2.529378733995356E-4 0.0 0.0 23.365388993155502 0.0 15 2.529378733995356E-4 0.0 0.0 24.11231453330433 0.0 16 2.529378733995356E-4 0.0 0.0 25.366633447492628 0.0 17 2.529378733995356E-4 0.0 0.0 26.95002453497372 0.0 18 2.529378733995356E-4 0.0 0.0 28.836688132660857 0.0 19 2.529378733995356E-4 0.0 0.0 30.09783636943094 0.0 20 2.529378733995356E-4 0.0 0.0 31.060770853462973 0.0 21 2.529378733995356E-4 0.0 0.0 32.26526100659156 0.0 22 2.529378733995356E-4 0.0 0.0 33.445216186000394 0.0 23 2.529378733995356E-4 0.0 0.0 34.70560560915028 0.0 24 2.529378733995356E-4 0.0 0.0 35.59974099161764 0.0 25 2.529378733995356E-4 0.0 0.0 36.434183035962704 0.0 26 2.529378733995356E-4 0.0 0.0 37.21297874815988 0.0 27 2.529378733995356E-4 0.0 0.0 38.0727145798449 0.0 28 2.529378733995356E-4 0.0 0.0 38.87832170662242 0.0 29 2.529378733995356E-4 0.0 0.0 39.67330544271716 0.0 30 5.058757467990712E-4 0.0 0.0 40.632951734395 0.0 31 5.058757467990712E-4 0.0 0.0 41.510899092964785 0.0 32 5.058757467990712E-4 0.0 0.0 42.30411226394573 0.0 33 5.058757467990712E-4 0.0 0.0 43.095048994066076 0.0 34 5.058757467990712E-4 0.0 0.0 43.92873222479095 0.0 35 5.058757467990712E-4 0.0 0.0 44.713851383823105 0.0 36 5.058757467990712E-4 0.0 0.0 45.4235950565822 0.0 37 5.058757467990712E-4 0.0 0.0 46.123980028025514 0.0 38 5.058757467990712E-4 0.0 0.0 46.84738234594819 0.0 39 5.058757467990712E-4 0.0 0.0 47.659818795307494 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAAGG 65 0.0 45.000004 2 GTTTGCG 20 7.0276676E-4 45.0 1 CTTCGCT 20 7.0276676E-4 45.0 2 ACGCCTA 20 7.0276676E-4 45.0 30 CGTATGG 35 1.2092278E-7 45.0 2 CAACGAG 20 7.0276676E-4 45.0 14 GCGAACG 40 6.7957444E-9 45.0 1 TCTTCGC 20 7.0276676E-4 45.0 1 TAGCGGA 20 7.0276676E-4 45.0 3 CCTACCG 35 1.2092278E-7 45.0 23 TAAGTAG 20 7.0276676E-4 45.0 1 ATATGCG 25 3.886147E-5 45.0 1 CGACAGG 40 6.7957444E-9 45.0 2 CGCTCCA 20 7.0276676E-4 45.0 12 CGCTAGG 20 7.0276676E-4 45.0 2 CTGTTCG 20 7.0276676E-4 45.0 13 AGCGACT 20 7.0276676E-4 45.0 19 CGATGTA 20 7.0276676E-4 45.0 10 CGGTAGT 20 7.0276676E-4 45.0 29 GGTTCCG 20 7.0276676E-4 45.0 9 >>END_MODULE