##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935357.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 436355 Sequences flagged as poor quality 0 Sequence length 51 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.990750650273288 33.0 31.0 34.0 30.0 34.0 2 32.052198324758514 33.0 31.0 34.0 30.0 34.0 3 32.095131257806145 33.0 31.0 34.0 30.0 34.0 4 35.801792118802354 37.0 35.0 37.0 35.0 37.0 5 35.82525924992265 37.0 35.0 37.0 35.0 37.0 6 35.787576629120785 37.0 35.0 37.0 35.0 37.0 7 36.06913866003598 37.0 35.0 37.0 35.0 37.0 8 35.93493371222972 37.0 35.0 37.0 35.0 37.0 9 37.7785449920363 39.0 38.0 39.0 35.0 39.0 10 37.15256156111423 39.0 37.0 39.0 33.0 39.0 11 37.06781175877439 39.0 37.0 39.0 33.0 39.0 12 37.24332939922769 39.0 37.0 39.0 34.0 39.0 13 37.29724192457976 39.0 37.0 39.0 34.0 39.0 14 38.47677464449817 40.0 38.0 41.0 34.0 41.0 15 38.56690538666911 40.0 38.0 41.0 34.0 41.0 16 38.454645873199574 40.0 38.0 41.0 34.0 41.0 17 38.440095793562584 40.0 38.0 41.0 34.0 41.0 18 38.20203504027684 39.0 38.0 41.0 34.0 41.0 19 37.94233823377754 39.0 37.0 41.0 34.0 41.0 20 37.84182145271625 39.0 35.0 41.0 34.0 41.0 21 37.78699682597885 39.0 35.0 41.0 34.0 41.0 22 37.88009075179613 39.0 35.0 41.0 34.0 41.0 23 37.8816697413803 39.0 35.0 41.0 34.0 41.0 24 37.84169082513091 40.0 35.0 41.0 34.0 41.0 25 37.59997249945572 39.0 35.0 41.0 33.0 41.0 26 37.6786423897973 39.0 35.0 41.0 34.0 41.0 27 37.7000584386566 39.0 35.0 41.0 34.0 41.0 28 37.559624617570556 39.0 35.0 41.0 33.0 41.0 29 37.50321641782494 39.0 35.0 41.0 33.0 41.0 30 37.309605710946364 39.0 35.0 41.0 33.0 41.0 31 37.16827353874712 39.0 35.0 41.0 33.0 41.0 32 36.897757559785035 40.0 35.0 41.0 32.0 41.0 33 36.49808298289237 40.0 35.0 41.0 30.0 41.0 34 36.163696989836254 40.0 35.0 41.0 28.0 41.0 35 35.96044046705091 40.0 35.0 41.0 25.0 41.0 36 35.79423176083694 40.0 35.0 41.0 24.0 41.0 37 35.69934113279325 40.0 35.0 41.0 23.0 41.0 38 35.593230282682676 39.0 35.0 41.0 23.0 41.0 39 35.4999805204478 39.0 35.0 41.0 23.0 41.0 40 35.41594114883524 39.0 35.0 41.0 23.0 41.0 41 35.27042889390519 39.0 35.0 41.0 22.0 41.0 42 35.281660574532204 39.0 35.0 41.0 22.0 41.0 43 35.20860996207217 39.0 35.0 41.0 21.0 41.0 44 35.020155607246394 39.0 35.0 41.0 20.0 41.0 45 35.003105269791796 39.0 35.0 41.0 20.0 41.0 46 34.91719586116808 39.0 35.0 41.0 20.0 41.0 47 34.87730861339964 39.0 35.0 41.0 20.0 41.0 48 34.80404028829737 39.0 35.0 41.0 20.0 41.0 49 34.730144034100675 39.0 35.0 41.0 20.0 41.0 50 34.63087623609217 39.0 34.0 40.0 20.0 41.0 51 33.55532307410251 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 3.0 11 6.0 12 4.0 13 11.0 14 6.0 15 18.0 16 34.0 17 56.0 18 142.0 19 291.0 20 467.0 21 805.0 22 1127.0 23 1757.0 24 3022.0 25 5539.0 26 8673.0 27 10060.0 28 9614.0 29 8231.0 30 7978.0 31 8373.0 32 10122.0 33 13155.0 34 21020.0 35 26431.0 36 31557.0 37 44975.0 38 86916.0 39 135927.0 40 32.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.84522922849515 19.56205383231543 22.34212968798341 21.250587251206014 2 39.35786229102451 22.546779571679025 23.149270662648533 14.946087474647934 3 27.663485006474087 22.313024945285377 35.03913098280071 14.984359065439836 4 24.21881266400064 23.409838319716744 35.6558306883157 16.715518327966908 5 23.373629269745962 26.80569719609034 32.956881438278465 16.86379209588523 6 23.011767941240503 31.62929266308396 31.966174330533626 13.392765065141916 7 73.26351250701836 4.801595031568333 17.956938731079052 3.977953730334246 8 75.29603190063136 4.406962221127293 16.59955769957947 3.697448178661869 9 69.2280368048951 6.738550033802753 18.46111537624182 5.5722977850603295 10 32.313139530886545 31.37170423164625 24.43629613502767 11.878860102439527 11 22.04351961132564 24.017371177137882 37.13765168268955 16.801457528846925 12 20.567886239415156 21.95987212246909 38.95222926287083 18.520012375244928 13 20.418695786687444 22.063686677132154 40.07768903759554 17.439928498584866 14 17.712642229377458 26.169517938375865 37.88429145993514 18.233548372311535 15 16.92039738286487 25.772135073506664 39.99014563829909 17.31732190532938 16 19.651888943635342 26.08518293591227 37.60974435952378 16.653183760928602 17 20.059126170205452 25.14558100629075 36.264051059343885 18.531241764159915 18 20.558031877714246 24.782344650571208 36.38872019342049 18.27090327829405 19 20.120544052434372 26.584546985825764 34.97221299171546 18.32269597002441 20 20.70561813202553 26.180059813683815 35.44063892931214 17.673683124978513 21 20.828683067685716 25.50812984840325 36.65455878814268 17.008628295768354 22 19.9058106358355 23.780866496316072 36.708872363098855 19.604450504749575 23 18.660952664688153 25.58192297555889 36.62453736063526 19.13258699911769 24 18.47005305313334 25.090350746525193 37.040024750489856 19.39957144985161 25 19.431197075775458 26.928303789345833 34.62295607933907 19.01754305553964 26 18.859873268325103 26.699820100606157 34.71989549793173 19.720411133137013 27 19.4456348615233 25.896804207583273 35.10467394667186 19.552886984221562 28 18.56859667014243 26.765592235679662 35.90218973083842 18.76362136333948 29 19.436926355834125 26.023994224885698 34.99513011195013 19.543949307330042 30 20.2335254551913 25.862657698433615 34.834251927902734 19.069564918472345 31 20.73495204592591 26.871240159961502 33.15465618590368 19.239151608208914 32 20.998040586219936 27.768903759553577 32.32299389258746 18.91006176163903 33 21.024166103287463 27.17122526383335 31.681543697219006 20.123064935660185 34 20.116189799589783 28.819653722313255 31.813546309770715 19.250610168326247 35 20.854350242348545 28.183703635801127 30.926653756688932 20.035292365161396 36 21.384194062174146 29.798214756333717 29.786756196216384 19.03083498527575 37 20.999644784636363 29.74642206460336 30.275578370821922 18.978354779938353 38 21.270754317012525 28.873738126067078 30.458456990294604 19.397050566625797 39 20.980165232436892 28.054909420082275 30.261598927478772 20.703326420002064 40 22.349921508863197 27.162287586941826 31.609813110884488 18.877977793310492 41 20.245671528915675 28.576503076623393 31.3366410376872 19.841184356773727 42 21.026916157715622 28.631733336388947 30.967675401908995 19.373675103986432 43 21.0003322982434 27.820008937676892 30.970654627539503 20.2090041365402 44 21.179315007276188 27.584879284069164 30.675711290119285 20.560094418535364 45 20.609824569444605 26.4527735444764 31.005488650296204 21.93191323578279 46 21.051208305164373 27.37037503867264 30.44333169093972 21.135084965223268 47 20.21748347102703 27.553253658145316 31.252076864021266 20.977186006806384 48 20.133377639765786 26.842135417263467 31.92102760367132 21.103459339299423 49 20.429696004400085 26.248352831983134 31.859609721442407 21.462341442174377 50 19.54807438897228 26.032702730574876 33.1115719998625 21.307650880590344 51 19.519198817476596 25.96693059550137 31.793837586368895 22.72003300065314 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 284.0 1 360.5 2 437.0 3 7568.0 4 14699.0 5 9823.0 6 4947.0 7 4780.5 8 4614.0 9 4632.5 10 4651.0 11 4594.5 12 4538.0 13 4304.0 14 4070.0 15 3923.0 16 3776.0 17 3514.5 18 3253.0 19 3151.0 20 3049.0 21 2988.0 22 2927.0 23 3049.0 24 3171.0 25 3580.0 26 4455.0 27 4921.0 28 6216.0 29 7511.0 30 8077.0 31 8643.0 32 9943.5 33 11244.0 34 12449.0 35 13654.0 36 15059.0 37 16464.0 38 18225.5 39 19987.0 40 20933.0 41 21879.0 42 23355.5 43 24832.0 44 26971.5 45 29111.0 46 34100.0 47 39089.0 48 39236.5 49 39384.0 50 37204.5 51 35025.0 52 30771.5 53 26518.0 54 23378.5 55 20239.0 56 17895.0 57 15551.0 58 14166.5 59 12782.0 60 11487.5 61 10193.0 62 8817.5 63 7442.0 64 6504.5 65 5567.0 66 4289.5 67 3012.0 68 2443.5 69 1875.0 70 1512.5 71 1150.0 72 943.5 73 737.0 74 646.5 75 432.5 76 309.0 77 222.0 78 135.0 79 101.5 80 68.0 81 50.5 82 33.0 83 28.0 84 23.0 85 16.0 86 9.0 87 6.5 88 4.0 89 2.0 90 0.0 91 1.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 436355.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.00033068933146 #Duplication Level Percentage of deduplicated Percentage of total 1 71.89289315818431 30.914181800147 2 9.167064805241042 7.8837363615179346 3 4.4498156017092 5.740306271401262 4 3.1331372793951333 5.389037564362521 5 2.2722374423838687 4.885348071359355 6 1.7322821789519809 4.46932239253025 7 1.4471771498611845 4.356036720705259 8 1.1485747615383826 3.9511275654056384 9 0.9194664165260257 3.558362397151832 >10 3.7838383118057095 22.781392080409766 >50 0.031037478753798413 0.9264116497948696 >100 0.01658899726496031 1.256615504105705 >500 0.0042810315522478215 1.275484295780612 >1k 0.0010702578880619554 0.6093239067701716 >5k 5.351289440309777E-4 2.0033134185578225 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8706 1.9951644876304842 No Hit GAATCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTC 1564 0.3584237604702593 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTT 1084 0.24842158334383702 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGC 861 0.19731640522051996 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCG 809 0.1853995026984909 No Hit CGCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTCTG 778 0.1782951954257428 Illumina Single End Adapter 2 (95% over 21bp) CGTTCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTC 750 0.17187840176003483 No Hit CGTCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTCT 692 0.15858647202392548 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCT 624 0.14300283026434898 No Hit GCTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTCTGC 526 0.1205440524343711 Illumina Single End Adapter 2 (95% over 22bp) GAACTGTCTCTTATACACATCTGACGCAGACGAGATCGTATGCCGTCTTCT 503 0.11527311478039669 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.875136070401393E-4 0.0 0.0 0.09831444580673993 0.0 2 6.875136070401393E-4 0.0 0.0 0.4054038569513355 0.0 3 6.875136070401393E-4 0.0 0.0 0.7851405392398392 0.0 4 6.875136070401393E-4 0.0 0.0 1.3186510983029873 0.0 5 6.875136070401393E-4 0.0 0.0 2.4720697597139942 0.0 6 6.875136070401393E-4 0.0 0.0 3.6823228793069864 0.0 7 6.875136070401393E-4 0.0 0.0 4.55569433145031 0.0 8 6.875136070401393E-4 0.0 0.0 5.66007035555912 0.0 9 6.875136070401393E-4 0.0 0.0 6.308166515795625 0.0 10 6.875136070401393E-4 0.0 0.0 7.25464358148755 0.0 11 6.875136070401393E-4 0.0 0.0 7.951553207823905 0.0 12 6.875136070401393E-4 0.0 0.0 8.73417286383793 0.0 13 6.875136070401393E-4 0.0 0.0 9.132472413516517 0.0 14 6.875136070401393E-4 0.0 0.0 9.359122732637417 0.0 15 6.875136070401393E-4 0.0 0.0 9.580960456509034 0.0 16 9.166848093868524E-4 0.0 0.0 9.892174949295871 0.0 17 9.166848093868524E-4 0.0 0.0 10.245556943314503 0.0 18 9.166848093868524E-4 0.0 0.0 10.686940679034272 0.0 19 9.166848093868524E-4 0.0 0.0 10.989446666131935 0.0 20 9.166848093868524E-4 0.0 0.0 11.275910669065325 0.0 21 9.166848093868524E-4 0.0 0.0 11.601333776397658 0.0 22 0.0011458560117335655 0.0 0.0 11.952882400797515 0.0 23 0.0011458560117335655 0.0 0.0 12.278076336927501 0.0 24 0.0011458560117335655 0.0 0.0 12.558811059802226 0.0 25 0.0011458560117335655 0.0 0.0 12.809753526371876 0.0 26 0.0011458560117335655 0.0 0.0 13.068946156226009 0.0 27 0.0013750272140802787 0.0 0.0 13.349680879100733 0.0 28 0.0013750272140802787 0.0 0.0 13.63774908045055 0.0 29 0.0013750272140802787 0.0 0.0 13.943463464381066 0.0 30 0.0013750272140802787 0.0 0.0 14.336262905203332 0.0 31 0.0013750272140802787 0.0 0.0 14.634872981861099 0.0 32 0.0013750272140802787 0.0 0.0 14.954337637932417 0.0 33 0.0013750272140802787 0.0 0.0 15.256614453827732 0.0 34 0.0013750272140802787 0.0 0.0 15.576308281101397 0.0 35 0.0013750272140802787 0.0 0.0 15.895085423565675 0.0 36 0.0013750272140802787 0.0 0.0 16.212945881220566 0.0 37 0.0013750272140802787 0.0 0.0 16.529660482863722 0.0 38 0.0013750272140802787 0.0 0.0 16.864250438289925 0.0 39 0.0013750272140802787 0.0 0.0 17.215111549082742 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGAC 45 3.8380676E-10 45.000004 9 CTCGATC 25 3.8868136E-5 45.000004 16 GGCGCGA 45 3.8380676E-10 45.000004 8 TAGTGCG 25 3.8868136E-5 45.000004 1 GTCTACT 20 7.0284726E-4 45.0 29 AAGCGCG 20 7.0284726E-4 45.0 1 CGTAAGG 70 0.0 45.0 2 CGTTTTT 4900 0.0 44.21939 1 CGCAAGG 60 3.6379788E-12 41.249996 2 CGTGAAT 50 1.0786607E-9 40.500004 27 TGGGCCG 40 3.4516415E-7 39.375 6 GCGAAAG 35 6.2393847E-6 38.571426 1 GGACGTT 35 6.2393847E-6 38.571426 8 GCGTAAG 35 6.2393847E-6 38.571426 1 GTTTTTT 5660 0.0 38.440815 2 CCCCCGT 65 9.094947E-12 38.076927 23 ACGCCGG 90 0.0 37.500004 27 CACGCCG 90 0.0 37.500004 26 GCGCGAG 30 1.1387619E-4 37.499996 1 CCCGTGA 60 1.546141E-10 37.499996 25 >>END_MODULE