##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935356.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 554467 Sequences flagged as poor quality 0 Sequence length 51 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.79741265034709 33.0 31.0 34.0 30.0 34.0 2 31.86494777867754 33.0 31.0 34.0 30.0 34.0 3 31.93456598859806 33.0 31.0 34.0 30.0 34.0 4 35.676983481433524 37.0 35.0 37.0 33.0 37.0 5 35.68871727262398 37.0 35.0 37.0 33.0 37.0 6 35.635909801665385 37.0 35.0 37.0 33.0 37.0 7 35.91847305610614 37.0 35.0 37.0 35.0 37.0 8 35.730732397058794 37.0 35.0 37.0 35.0 37.0 9 37.576634858341436 39.0 37.0 39.0 35.0 39.0 10 36.9374191791396 39.0 37.0 39.0 32.0 39.0 11 36.90687633348784 39.0 37.0 39.0 33.0 39.0 12 37.02559935938478 39.0 37.0 39.0 33.0 39.0 13 36.985454499546414 39.0 37.0 39.0 33.0 39.0 14 38.11966627409747 40.0 37.0 41.0 33.0 41.0 15 38.180490452993595 40.0 37.0 41.0 33.0 41.0 16 38.14448831039539 40.0 37.0 41.0 33.0 41.0 17 38.08578328376621 40.0 37.0 41.0 33.0 41.0 18 37.9275556525456 39.0 37.0 41.0 33.0 41.0 19 37.686044435466854 39.0 37.0 41.0 33.0 41.0 20 37.57653025337847 39.0 35.0 41.0 33.0 41.0 21 37.58967981863664 39.0 35.0 41.0 33.0 41.0 22 37.70459919165613 39.0 35.0 41.0 33.0 41.0 23 37.69096086872618 39.0 35.0 41.0 33.0 41.0 24 37.674692993451366 39.0 35.0 41.0 33.0 41.0 25 37.446064418621845 39.0 35.0 41.0 33.0 41.0 26 37.48547524018562 39.0 35.0 41.0 33.0 41.0 27 37.4897207588549 39.0 35.0 41.0 33.0 41.0 28 37.35783554296288 39.0 35.0 41.0 33.0 41.0 29 37.28536053543313 39.0 35.0 41.0 33.0 41.0 30 37.13370678507467 39.0 35.0 41.0 32.0 41.0 31 37.03247984100046 39.0 35.0 41.0 32.0 41.0 32 36.76687160822917 39.0 35.0 41.0 31.0 41.0 33 36.39560334519457 39.0 35.0 41.0 30.0 41.0 34 36.08965186386205 39.0 35.0 41.0 29.0 41.0 35 35.92188353860554 39.0 35.0 41.0 27.0 41.0 36 35.75563198531202 39.0 35.0 41.0 25.0 41.0 37 35.63626509783269 39.0 35.0 41.0 25.0 41.0 38 35.52264787624872 39.0 35.0 41.0 24.0 41.0 39 35.4207518211183 39.0 35.0 41.0 23.0 41.0 40 35.31236124061486 39.0 35.0 41.0 23.0 41.0 41 35.187410612353844 39.0 35.0 41.0 23.0 41.0 42 35.24050484519367 39.0 35.0 41.0 23.0 41.0 43 35.16152990168937 39.0 35.0 41.0 23.0 41.0 44 34.98025851854123 39.0 35.0 41.0 22.0 41.0 45 34.9972423967522 39.0 35.0 40.0 22.0 41.0 46 34.875803248885866 39.0 34.0 40.0 22.0 41.0 47 34.777330300991764 38.0 34.0 40.0 21.0 41.0 48 34.737434328823895 38.0 34.0 40.0 21.0 41.0 49 34.633552582930996 38.0 34.0 40.0 20.0 41.0 50 34.479905927674686 38.0 34.0 40.0 20.0 41.0 51 33.300856498222615 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 4.0 12 6.0 13 3.0 14 11.0 15 18.0 16 34.0 17 69.0 18 165.0 19 399.0 20 761.0 21 1276.0 22 1850.0 23 2697.0 24 4030.0 25 6668.0 26 10313.0 27 11907.0 28 11151.0 29 10195.0 30 10705.0 31 12163.0 32 15021.0 33 19583.0 34 29924.0 35 39124.0 36 42364.0 37 61307.0 38 110955.0 39 151695.0 40 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.19084995139476 19.41558289312078 23.379750282703927 17.013816872780527 2 35.02480760802717 27.122083009448716 22.80279980593976 15.05030957658436 3 26.554510908674455 26.384798373933886 32.53106136163198 14.529629355759678 4 23.857867104805155 22.951952054856285 36.976231227467096 16.213949612871463 5 25.546696196527474 26.18514717737936 31.212317414742447 17.055839211350722 6 22.251098802994587 34.01428759511387 30.518497944873186 13.216115657018362 7 72.73471640332066 4.6383283405504745 18.571529054028463 4.055426202100396 8 74.16293485455401 6.951180142370962 14.79294529701497 4.092939706060053 9 68.52887547861279 6.659368366377079 15.9829169274276 8.828839227582526 10 33.275019072370405 30.68225881792785 22.881614234931927 13.161107874769822 11 24.393155949767976 24.2907152274166 33.726804300346096 17.589324522469326 12 22.136213697118134 21.584873400941806 36.78217098582963 19.496741916110427 13 21.49704130272857 23.138257100963628 38.9736449599345 16.39105663637331 14 18.506782189021166 28.86862518418589 33.725000766501886 18.899591860291054 15 16.51694329869947 25.611984121688035 40.150991853437624 17.720080726174867 16 18.89147595799209 26.044110830761795 34.7625737870784 20.301839424167714 17 19.43415929171619 25.361292917342244 34.05721170060617 21.147336090335404 18 20.22464817563534 25.253982653611484 34.42188624390631 20.099482926846864 19 20.141144558648215 27.371872446872402 32.51194390288331 19.975039091596074 20 21.651243446408895 25.948703890402857 34.331709551695596 18.06834311149266 21 20.351977665036873 28.117272984686192 34.07668986612368 17.45405948415325 22 19.243706117767154 23.72548772063982 34.40601514607722 22.624791015515804 23 18.311098766923912 27.844578667440985 33.8732512484963 19.971071317138804 24 19.443357314321684 25.606393166770967 33.904091677232365 21.04615784167498 25 18.251401796680415 29.713580790200318 31.91262960645088 20.122387806668385 26 18.01081038186222 27.714183170504285 33.11901339484586 21.155993052787633 27 19.857268331568875 28.206728263359228 32.05384630645287 19.882157098619036 28 17.529627552225833 27.83574135160433 34.8727697049599 19.761861391209937 29 18.693989002050618 27.053007663215308 32.90295004030898 21.3500532944251 30 18.992293499883672 29.79149345227038 32.448820218335804 18.767392829510143 31 19.742202872308003 30.07284473196782 29.399044487769338 20.785907907954847 32 20.557219816508468 29.663081842562317 29.058356944597243 20.721341396331976 33 21.423817828653462 27.938723134108972 28.940766537954467 21.696692499283095 34 19.398088614831902 30.381790079481735 29.01344895187631 21.206672353810056 35 18.68028214483459 29.322033592621384 28.281935624662964 23.715748637881067 36 21.304784594935317 30.581801982805107 28.00473247280722 20.108680949452356 37 19.450391096314117 30.210274010896953 29.701677466828503 20.637657425960427 38 20.838571096205904 28.815961995934835 27.981647239601276 22.363819668257985 39 21.865683620485978 27.802917035639634 28.092384217636035 22.23901512623835 40 21.938005327638976 26.295884155414118 30.28530101881627 21.480809498130636 41 20.56353218496322 28.80946927409566 28.49403120474257 22.132967336198547 42 20.20048082212287 27.87397626910168 30.02396896478961 21.90157394398585 43 21.86315867310408 27.479002357218736 28.35660192581344 22.301237043863747 44 20.805927133625627 27.682080268077268 28.899104906153116 22.61288769214399 45 19.85023454957644 26.65063926257108 28.534791069621818 24.96433511823066 46 22.093469945010252 28.253980850077642 27.8245594417702 21.8279897631419 47 18.946483740240627 27.162482167559116 32.19470229968601 21.696331792514254 48 20.039785956603367 26.824499925153344 29.341331404754477 23.794382713488808 49 19.983696054048302 25.08877895348145 31.771232553064475 23.15629243940577 50 19.730119195551765 25.254523713764748 31.055951030449062 23.95940606023442 51 19.78963581241084 25.167232675704774 28.668793634246942 26.374337877637444 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 256.0 1 390.5 2 525.0 3 6898.5 4 13272.0 5 9079.5 6 4887.0 7 4698.0 8 4509.0 9 4528.5 10 4548.0 11 4497.0 12 4446.0 13 4368.5 14 4291.0 15 4063.5 16 3836.0 17 3578.0 18 3320.0 19 3335.0 20 3350.0 21 3262.0 22 3174.0 23 3183.0 24 3192.0 25 3513.5 26 4491.0 27 5147.0 28 6006.5 29 6866.0 30 8325.0 31 9784.0 32 10871.5 33 11959.0 34 13639.0 35 15319.0 36 17396.0 37 19473.0 38 21554.0 39 23635.0 40 25848.5 41 28062.0 42 30984.5 43 33907.0 44 36671.5 45 39436.0 46 55676.0 47 71916.0 48 64006.0 49 56096.0 50 52727.5 51 49359.0 52 42021.0 53 34683.0 54 29686.0 55 24689.0 56 22061.0 57 19433.0 58 17292.5 59 15152.0 60 13486.0 61 11820.0 62 10217.5 63 8615.0 64 6811.0 65 5007.0 66 3873.0 67 2739.0 68 2115.5 69 1492.0 70 1238.0 71 984.0 72 785.0 73 586.0 74 458.5 75 256.0 76 181.0 77 182.0 78 183.0 79 139.5 80 96.0 81 61.5 82 27.0 83 27.0 84 27.0 85 23.0 86 19.0 87 10.0 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 554467.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 40.408405937094365 #Duplication Level Percentage of deduplicated Percentage of total 1 76.9777414060439 31.10547822856099 2 8.681997589068585 7.016513658479159 3 3.380904947285843 4.098509386339709 4 1.9090614183923396 3.0856851501297125 5 1.3372207249976755 2.701747894160085 6 1.0507569727211823 2.5475648576969956 7 0.8081163133880137 2.2858284425039717 8 0.667695179970847 2.158439829960261 9 0.5842862932710979 2.1249069949780823 >10 4.513182554149378 32.531120642783634 >50 0.060849134155030696 1.6663905741206952 >100 0.02013390468293022 1.3838074703228154 >500 0.003579360832520928 1.0994164132522917 >1k 0.002684520624390696 1.6329434376738525 >5k 0.001789680416260464 4.5616470190377525 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8145 1.468978316112591 No Hit GAATCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTC 6339 1.1432601038474788 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCG 5641 1.0173734415213167 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGC 5106 0.9208843808558489 No Hit GCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCTGC 2389 0.43086423538280905 No Hit GAACTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCT 1655 0.29848485121747553 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTT 1464 0.26403735479298135 No Hit CGCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCTG 1419 0.25592145249401677 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCT 1104 0.19911013640126463 No Hit CTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCTGCT 1001 0.1805337378058568 No Hit CCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCTGC 899 0.16213769259487038 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTC 849 0.15312002337379862 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTT 843 0.15203790306727002 No Hit CGTCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTCT 760 0.13706857216029086 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAACGACGT 749 0.1350846849316551 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAACGACGTCGTA 697 0.12570630894174042 No Hit CGTTCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCTTC 646 0.11650828633624724 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAAACGACGTCGTATGCCGTCT 638 0.11506545926087575 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.19766730932589316 0.0 2 0.0 0.0 0.0 0.9850901857098799 0.0 3 0.0 0.0 0.0 1.5081150005320425 0.0 4 0.0 0.0 0.0 2.2756990046296712 0.0 5 0.0 0.0 0.0 4.483224429948041 0.0 6 0.0 0.0 0.0 5.657685669300427 0.0 7 0.0 0.0 0.0 6.604721290897384 0.0 8 0.0 0.0 0.0 7.880360778910196 0.0 9 0.0 0.0 0.0 8.375070112378193 0.0 10 0.0 0.0 0.0 10.32469019797391 0.0 11 0.0 0.0 0.0 11.442520474617966 0.0 12 0.0 0.0 0.0 13.280862522025657 0.0 13 0.0 0.0 0.0 13.79649284808654 0.0 14 0.0 0.0 0.0 14.053676774271507 0.0 15 0.0 0.0 0.0 14.438190189858007 0.0 16 0.0 0.0 0.0 14.998728508639829 0.0 17 0.0 0.0 0.0 15.736554204307922 0.0 18 0.0 0.0 0.0 16.579886629862553 0.0 19 0.0 0.0 0.0 17.194891670739647 0.0 20 0.0 0.0 0.0 17.68779747036343 0.0 21 0.0 0.0 0.0 18.2495982628362 0.0 22 0.0 0.0 0.0 18.8999525670599 0.0 23 0.0 0.0 0.0 19.515137961321415 0.0 24 0.0 0.0 0.0 19.990369129271894 0.0 25 0.0 0.0 0.0 20.43331704141094 0.0 26 0.0 0.0 0.0 20.881134494929366 0.0 27 0.0 0.0 0.0 21.34662658012109 0.0 28 0.0 0.0 0.0 21.788672725338028 0.0 29 0.0 0.0 0.0 22.285005239265818 0.0 30 0.0 0.0 0.0 22.861595009261148 0.0 31 0.0 0.0 0.0 23.375241448093394 0.0 32 0.0 0.0 0.0 23.841454946822804 0.0 33 1.8035338442143537E-4 0.0 0.0 24.29684724248693 0.0 34 1.8035338442143537E-4 0.0 0.0 24.762700034447498 0.0 35 1.8035338442143537E-4 0.0 0.0 25.238291909166822 0.0 36 1.8035338442143537E-4 0.0 0.0 25.70071798682338 0.0 37 1.8035338442143537E-4 0.0 0.0 26.175227741236178 0.0 38 1.8035338442143537E-4 0.0 0.0 26.643605480578646 0.0 39 1.8035338442143537E-4 0.0 0.0 27.11504922745628 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCGTCG 30 2.1634605E-6 45.000004 40 GCTACGA 30 2.1634605E-6 45.000004 10 CCACGAA 35 1.2104101E-7 45.000004 25 TGCGTAG 30 2.1634605E-6 45.000004 1 CGGGTCC 40 6.8048394E-9 45.0 6 CGAACGG 20 7.0301234E-4 45.0 2 GACCGAC 25 3.8881844E-5 45.0 9 CCGTCGA 20 7.0301234E-4 45.0 41 CGTAGAT 20 7.0301234E-4 45.0 37 CGGGCTA 25 3.8881844E-5 45.0 6 CAAGCGT 20 7.0301234E-4 45.0 38 GATCTCG 20 7.0301234E-4 45.0 9 CGTCATA 50 2.1827873E-11 45.0 38 TCGCGTC 25 3.8881844E-5 45.0 40 CCGCAGG 40 6.8048394E-9 45.0 2 CGTTTTT 5175 0.0 44.173912 1 CGGCGAA 70 0.0 41.785717 31 GCATGCG 65 0.0 41.538464 1 AACGAGC 115 0.0 41.08696 15 TCTTGCG 55 6.002665E-11 40.909092 1 >>END_MODULE