##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935354.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 445345 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.86024991860243 33.0 31.0 34.0 30.0 34.0 2 31.884390753236254 33.0 31.0 34.0 30.0 34.0 3 31.9510222411838 33.0 31.0 34.0 30.0 34.0 4 35.68238781169655 37.0 35.0 37.0 33.0 37.0 5 35.69731107343745 37.0 35.0 37.0 35.0 37.0 6 35.660160100596165 37.0 35.0 37.0 33.0 37.0 7 35.88953507954507 37.0 35.0 37.0 35.0 37.0 8 35.78286047895452 37.0 35.0 37.0 35.0 37.0 9 37.556846938890075 39.0 37.0 39.0 35.0 39.0 10 36.89323558140318 39.0 37.0 39.0 32.0 39.0 11 36.916377190717306 39.0 37.0 39.0 33.0 39.0 12 36.887970000785906 39.0 35.0 39.0 33.0 39.0 13 36.85115584546812 39.0 37.0 39.0 33.0 39.0 14 37.79751653212678 40.0 37.0 41.0 33.0 41.0 15 37.95530431463248 40.0 37.0 41.0 33.0 41.0 16 37.91121265535708 40.0 37.0 41.0 33.0 41.0 17 37.91096565583985 40.0 36.0 41.0 33.0 41.0 18 37.8258967766563 39.0 36.0 41.0 33.0 41.0 19 37.73241419573589 39.0 36.0 41.0 33.0 41.0 20 37.74650664091884 39.0 36.0 41.0 33.0 41.0 21 37.68316473745074 39.0 36.0 41.0 33.0 41.0 22 37.78057011979477 39.0 36.0 41.0 33.0 41.0 23 37.810854506057105 39.0 36.0 41.0 33.0 41.0 24 37.837234054497074 40.0 36.0 41.0 33.0 41.0 25 37.54077176121883 39.0 35.0 41.0 33.0 41.0 26 37.64779665203382 39.0 35.0 41.0 33.0 41.0 27 37.63810978005816 39.0 36.0 41.0 33.0 41.0 28 37.38694270733925 39.0 35.0 41.0 33.0 41.0 29 37.21486488003683 39.0 35.0 41.0 32.0 41.0 30 37.100566976164544 39.0 35.0 41.0 32.0 41.0 31 37.13288798571894 39.0 35.0 41.0 32.0 41.0 32 37.154406134569825 39.0 35.0 41.0 32.0 41.0 33 37.01326387407516 39.0 35.0 41.0 31.0 41.0 34 36.919017840101496 40.0 35.0 41.0 31.0 41.0 35 36.86516745444543 40.0 35.0 41.0 31.0 41.0 36 36.74214148581437 39.0 35.0 41.0 31.0 41.0 37 36.68700670266872 39.0 35.0 41.0 31.0 41.0 38 36.52747869629164 39.0 35.0 41.0 30.0 41.0 39 36.44864318674286 39.0 35.0 41.0 30.0 41.0 40 36.34486970775466 39.0 35.0 41.0 30.0 41.0 41 36.15971886964039 39.0 35.0 41.0 29.0 41.0 42 36.19253387822924 39.0 35.0 41.0 30.0 41.0 43 36.068733229294146 39.0 35.0 41.0 29.0 41.0 44 35.94767202955013 39.0 35.0 41.0 29.0 41.0 45 35.93450695528186 39.0 35.0 41.0 29.0 41.0 46 35.79944761926147 38.0 35.0 40.0 29.0 41.0 47 35.78494650215002 38.0 35.0 40.0 29.0 41.0 48 35.68335560071405 38.0 35.0 40.0 28.0 41.0 49 35.473215147806755 38.0 35.0 40.0 27.0 41.0 50 35.30164703768988 38.0 35.0 40.0 27.0 41.0 51 34.05248515196084 36.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 2.0 11 4.0 12 4.0 13 12.0 14 12.0 15 14.0 16 42.0 17 61.0 18 122.0 19 274.0 20 525.0 21 797.0 22 1264.0 23 1752.0 24 2460.0 25 3499.0 26 4841.0 27 5631.0 28 6133.0 29 6721.0 30 7788.0 31 9531.0 32 12000.0 33 17000.0 34 28903.0 35 33209.0 36 34560.0 37 51177.0 38 90904.0 39 126058.0 40 43.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.07916334527164 20.950049961265986 25.11064455646746 12.860142136994915 2 32.995542781439106 25.69940158753326 24.57375742401958 16.73129820700805 3 30.62973649642412 25.20450437301418 28.20599759736833 15.959761533193367 4 27.48588173214025 25.310714165422315 28.869977208680908 18.333426893756528 5 25.480021107231472 29.271912786715916 26.694360551931652 18.55370555412096 6 25.297241464482596 34.37941371296411 26.000740998551684 14.322603824001618 7 79.083182701052 5.596110880328734 10.839012451021118 4.481693967598154 8 80.81083205155554 5.892510301002594 9.147739393054822 4.148918254387048 9 74.86196095162178 7.313655705127485 11.069395637090345 6.754987706160392 10 38.345776869617936 30.308637124027438 17.56166567492618 13.783920331428442 11 28.523953339545745 26.33127126160617 26.74376045537729 18.40101494347079 12 25.156002649631187 21.790746499904568 32.91493112081644 20.1383197296478 13 25.736676060133156 22.546789567638573 33.024059998428186 18.69247437380009 14 20.369152005748354 28.011317068789367 32.11824540524762 19.501285520214665 15 18.89995396827179 24.654369084642244 36.41513882495593 20.030538122130036 16 23.063692193692532 26.19542152713065 29.884022499410566 20.85686377976625 17 23.624605642816242 23.670637371026956 28.504193378167486 24.200563607989313 18 26.49945547833702 22.88966980655447 29.582009453345158 21.02886526176335 19 26.085169924440603 25.11064455646746 27.71940854842875 21.084776970663192 20 24.63842638853024 25.95111655009038 28.192749441444278 21.217707619935105 21 25.351356813257137 26.207996048007725 29.781629972268693 18.659017166466445 22 23.09602667594786 24.809080600433372 29.401699805768562 22.693192917850205 23 21.34749463898775 25.987268297611966 29.302226363830293 23.363010699569998 24 22.39971258237995 24.710056248526424 29.11809945098744 23.772131718106188 25 22.19919388339377 26.506640918838205 28.067004232673543 23.227160965094477 26 20.365110195466436 25.390652190997994 28.855830872694206 25.38840674084137 27 21.678249447057897 25.074043718914552 29.212857447596807 24.034849386430746 28 21.53880699233179 25.331147761847557 30.321660734935836 22.808384510884817 29 21.87562451582481 25.57882091412276 30.818578854595874 21.726975715456557 30 23.571388474104346 26.07686175886111 29.902210645679194 20.449539121355354 31 23.985449482985103 27.64441051319763 27.55481705194849 20.815322951868776 32 24.754965251658824 26.911495582076817 27.732656704352802 20.600882461911553 33 24.3153061109926 26.31375675038453 27.711549472880577 21.659387665742287 34 22.93031245438929 25.724101539256083 29.97159505551876 21.373990950835868 35 21.663204931008543 27.764093006545487 28.468939810708555 22.103762251737415 36 23.831860692272283 27.675846815390315 27.734453064478103 20.757839427859302 37 23.134199328610404 28.101359620069832 27.297713009015485 21.466728042304283 38 23.86397062951195 27.78699659814301 25.631588992803334 22.717443779541703 39 25.683234346405598 24.5582638179389 26.602521640525882 23.15598019512962 40 24.720385319246876 24.211341768741086 28.24911024037544 22.819162671636597 41 22.222771110038284 24.867911394536822 28.01558342408694 24.89373407133795 42 23.70005276807868 24.763947052285307 28.56257508223961 22.9734250973964 43 23.506719509593683 25.354051353445083 28.15569951386004 22.98352962310119 44 23.119828447608036 24.501229383960748 28.03646611054351 24.342476057887705 45 22.321795461945236 23.86688971471556 27.855482827919925 25.95583199541928 46 22.418574363695562 25.551875512243317 27.575699738405056 24.453850385656065 47 20.742570366794283 25.28825966385611 29.662845658983482 24.30632431036612 48 21.9259225993331 25.08302551954103 28.933523448113263 24.05752843301261 49 24.197419977770043 23.72026181948826 29.538447720306728 22.543870482434965 50 21.956011631431814 24.239634440714504 30.288428072617858 23.515925855235828 51 22.412062558241363 23.757311747072492 28.228003008903208 25.602622685782933 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 202.0 1 386.5 2 571.0 3 2479.0 4 4387.0 5 2833.0 6 1279.0 7 1323.5 8 1368.0 9 1337.5 10 1307.0 11 1347.5 12 1388.0 13 1379.5 14 1371.0 15 1341.5 16 1312.0 17 1276.5 18 1241.0 19 1293.0 20 1345.0 21 1459.5 22 1574.0 23 1778.5 24 1983.0 25 2515.0 26 3589.5 27 4132.0 28 4189.5 29 4247.0 30 5364.5 31 6482.0 32 7383.0 33 8284.0 34 9983.5 35 11683.0 36 13142.5 37 14602.0 38 15357.5 39 16113.0 40 17372.0 41 18631.0 42 21030.0 43 23429.0 44 26057.0 45 28685.0 46 35199.0 47 41713.0 48 41490.5 49 41268.0 50 40212.0 51 39156.0 52 34503.0 53 29850.0 54 27984.0 55 26118.0 56 24862.5 57 23607.0 58 22826.5 59 22046.0 60 20884.0 61 19722.0 62 16582.0 63 13442.0 64 11928.0 65 10414.0 66 8591.5 67 6769.0 68 5571.0 69 4373.0 70 3756.5 71 3140.0 72 2660.0 73 2180.0 74 1824.0 75 1076.5 76 685.0 77 516.5 78 348.0 79 294.0 80 240.0 81 151.0 82 62.0 83 58.0 84 54.0 85 34.5 86 15.0 87 10.5 88 6.0 89 5.0 90 4.0 91 2.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 445345.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.21926670031299 #Duplication Level Percentage of deduplicated Percentage of total 1 75.12543242832373 27.96113505526123 2 8.354642125174799 6.219073068851011 3 3.205034837988236 3.578671392566358 4 1.810870731308657 2.6959712283347095 5 1.282855976442853 2.3873479362658494 6 1.0620277661282684 2.3716736802399394 7 0.8838628099180219 2.3027707954178833 8 0.8188423370866684 2.4381369063629044 9 0.7150800746786211 2.395328041038899 >10 6.662771090426729 42.49007550094417 >50 0.05017019438029993 1.267962729480058 >100 0.022969486583751777 1.5131861814199559 >500 0.0030223008662831285 0.8283603211400947 >1k 0.002417840693026503 1.5503071626769127 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2557 0.574161605047772 No Hit GAATCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTC 1789 0.4017110330193445 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGC 1296 0.29101034029797124 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCG 1249 0.28045672456185655 No Hit GCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC 910 0.20433596425243353 No Hit GAATGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTT 875 0.196476888704263 No Hit CCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC 737 0.16548967654290495 No Hit CTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGCT 582 0.13068519911529264 No Hit CGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTG 578 0.1297870190526446 No Hit GAACTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCT 495 0.11114978275269735 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.981800626480593E-4 0.0 0.0 0.14550517014898562 0.0 2 8.981800626480593E-4 0.0 0.0 0.6626323412186058 0.0 3 8.981800626480593E-4 0.0 0.0 1.0052880351188405 0.0 4 8.981800626480593E-4 0.0 0.0 1.4568480616151522 0.0 5 8.981800626480593E-4 0.0 0.0 2.6810674870044573 0.0 6 0.0011227250783100741 0.0 0.0 3.568244843885078 0.0 7 0.0011227250783100741 0.0 0.0 4.180579101595392 0.0 8 0.0011227250783100741 0.0 0.0 5.057427387755561 0.0 9 0.0011227250783100741 0.0 0.0 5.4497075301171005 0.0 10 0.0011227250783100741 0.0 0.0 6.490249132694877 0.0 11 0.0011227250783100741 0.0 0.0 7.510806228878734 0.0 12 0.0011227250783100741 0.0 0.0 8.68495211577541 0.0 13 0.0011227250783100741 0.0 0.0 9.197139296500467 0.0 14 0.0011227250783100741 0.0 0.0 9.47175785065511 0.0 15 0.0011227250783100741 0.0 0.0 9.772872716657872 0.0 16 0.0011227250783100741 0.0 0.0 10.292918972931098 0.0 17 0.0011227250783100741 0.0 0.0 10.900313240296848 0.0 18 0.001347270093972089 0.0 0.0 11.690936240442802 0.0 19 0.001347270093972089 0.0 0.0 12.155968967878836 0.0 20 0.001347270093972089 0.0 0.0 12.611570804657063 0.0 21 0.001347270093972089 0.0 0.0 13.117470724943583 0.0 22 0.001347270093972089 0.0 0.0 13.635496076075851 0.0 23 0.001571815109634104 0.0 0.0 14.178445923946603 0.0 24 0.001571815109634104 0.0 0.0 14.57589060166837 0.0 25 0.0017963601252961186 0.0 0.0 14.963230753685345 0.0 26 0.0017963601252961186 0.0 0.0 15.345406370342094 0.0 27 0.0020209051409581335 0.0 0.0 15.769122814896317 0.0 28 0.0020209051409581335 0.0 0.0 16.140969360832614 0.0 29 0.0020209051409581335 0.0 0.0 16.548294019243507 0.0 30 0.0020209051409581335 0.0 0.0 17.075525716017918 0.0 31 0.0020209051409581335 0.0 0.0 17.49452671524324 0.0 32 0.0020209051409581335 0.0 0.0 17.909934994217966 0.0 33 0.0020209051409581335 0.0 0.0 18.385521337390113 0.0 34 0.0020209051409581335 0.0 0.0 18.88895126250435 0.0 35 0.0020209051409581335 0.0 0.0 19.364313060660837 0.0 36 0.0022454501566201482 0.0 0.0 19.771188629040406 0.0 37 0.0024699951722821634 0.0 0.0 20.189066903187417 0.0 38 0.0024699951722821634 0.0 0.0 20.657018715827057 0.0 39 0.0024699951722821634 0.0 0.0 21.333348303001046 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGGT 20 7.0286257E-4 45.000004 12 CTATACT 20 7.0286257E-4 45.000004 38 TAATTCG 20 7.0286257E-4 45.000004 43 CGGTATC 20 7.0286257E-4 45.000004 18 TCATGCG 25 3.886943E-5 45.0 1 TCGACGG 30 2.1624946E-6 44.999996 2 CGTTTTT 1415 0.0 43.409897 1 ACAACGA 135 0.0 41.666668 13 CGTAAGG 65 0.0 41.53846 2 GTGACGG 40 3.4518598E-7 39.375004 2 GCGATGA 120 0.0 39.374996 9 CACAACG 145 0.0 38.793102 12 TACGGGA 105 0.0 38.57143 4 CTAGTCG 35 6.2396703E-6 38.57143 1 CGATGCA 35 6.2396703E-6 38.57143 10 CTTACGG 35 6.2396703E-6 38.57143 2 GTAGGGC 175 0.0 38.571426 4 TTATGAG 60 1.546141E-10 37.499996 1 AAGACGC 30 1.1387991E-4 37.499996 38 TGCGACG 30 1.1387991E-4 37.499996 1 >>END_MODULE