##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935346.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 855824 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32863298996055 33.0 31.0 34.0 30.0 34.0 2 32.472702331320455 34.0 31.0 34.0 31.0 34.0 3 32.536571771766155 34.0 31.0 34.0 31.0 34.0 4 35.973139337059955 37.0 35.0 37.0 35.0 37.0 5 31.710257015461124 37.0 35.0 37.0 0.0 37.0 6 33.45168399110097 37.0 35.0 37.0 17.0 37.0 7 35.24404199928957 37.0 35.0 37.0 32.0 37.0 8 35.7901250724448 37.0 35.0 37.0 35.0 37.0 9 37.81200924489147 39.0 38.0 39.0 35.0 39.0 10 37.55146151545178 39.0 37.0 39.0 35.0 39.0 11 37.42800505711455 39.0 37.0 39.0 35.0 39.0 12 37.16289564209464 39.0 37.0 39.0 34.0 39.0 13 37.05505804931855 39.0 37.0 39.0 33.0 39.0 14 38.205250144889604 40.0 37.0 41.0 33.0 41.0 15 38.311380610966744 40.0 37.0 41.0 34.0 41.0 16 38.38300515059171 40.0 37.0 41.0 34.0 41.0 17 38.39313807511825 40.0 37.0 41.0 34.0 41.0 18 38.39744854082148 40.0 37.0 41.0 34.0 41.0 19 38.41029931387762 40.0 37.0 41.0 34.0 41.0 20 38.3321757744583 40.0 37.0 41.0 34.0 41.0 21 38.27350716969844 40.0 37.0 41.0 34.0 41.0 22 38.23208860700331 40.0 37.0 41.0 34.0 41.0 23 38.193140178354426 40.0 37.0 41.0 34.0 41.0 24 38.15419525509918 40.0 37.0 41.0 34.0 41.0 25 38.05968867430687 40.0 36.0 41.0 34.0 41.0 26 38.020479678064646 40.0 36.0 41.0 34.0 41.0 27 37.951997139598795 40.0 36.0 41.0 34.0 41.0 28 37.899494522238214 40.0 36.0 41.0 34.0 41.0 29 37.855263465385406 40.0 36.0 41.0 34.0 41.0 30 37.767542158200754 40.0 36.0 41.0 33.0 41.0 31 37.57075637046869 40.0 36.0 41.0 33.0 41.0 32 37.56553450242106 39.0 35.0 41.0 33.0 41.0 33 37.53976051150704 39.0 35.0 41.0 33.0 41.0 34 37.50421114621698 39.0 35.0 41.0 33.0 41.0 35 37.41706472358803 39.0 35.0 41.0 33.0 41.0 36 37.42423559049524 39.0 35.0 41.0 33.0 41.0 37 37.41844000635645 39.0 35.0 41.0 33.0 41.0 38 37.36403162332442 39.0 35.0 41.0 33.0 41.0 39 37.36022242891062 39.0 35.0 41.0 33.0 41.0 40 37.258082269251624 39.0 35.0 41.0 33.0 41.0 41 37.196563779468676 39.0 35.0 41.0 33.0 41.0 42 37.18783534932416 39.0 35.0 41.0 33.0 41.0 43 37.17693240666305 39.0 35.0 41.0 33.0 41.0 44 37.15139210865785 39.0 35.0 41.0 33.0 41.0 45 37.1450835685842 39.0 35.0 41.0 33.0 41.0 46 37.023892762998 39.0 35.0 41.0 32.0 41.0 47 36.96585863448559 39.0 35.0 41.0 32.0 41.0 48 36.91841196320739 39.0 35.0 40.0 32.0 41.0 49 36.91950915141431 39.0 35.0 40.0 32.0 41.0 50 36.84930546467498 39.0 35.0 40.0 32.0 41.0 51 36.19110821851222 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 8.0 11 11.0 12 10.0 13 7.0 14 8.0 15 20.0 16 25.0 17 40.0 18 83.0 19 153.0 20 252.0 21 442.0 22 711.0 23 1201.0 24 1831.0 25 2647.0 26 3575.0 27 4878.0 28 6107.0 29 8117.0 30 10615.0 31 14572.0 32 20444.0 33 31581.0 34 53960.0 35 82267.0 36 73474.0 37 113761.0 38 181570.0 39 243218.0 40 233.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.739722185869994 4.349375572547626 55.80247807960516 17.10842416197723 2 18.43895473835742 4.638336854306493 55.2222185869992 21.70048982033689 3 20.842719998504368 4.573370225653873 52.3948849296117 22.189024846230065 4 18.789143562227746 4.8493615509730965 51.451466656695764 24.910028230103386 5 15.817153994279199 17.113682252425733 44.88457907233263 22.18458468096244 6 21.478481556955636 6.349553179158332 52.37326833554563 19.798696928340405 7 83.08250294453066 2.3104049430724074 9.28496980687618 5.322122305520762 8 84.15316700630035 2.630564228159061 7.192366654826227 6.023902110714353 9 78.33655050571146 5.739030454859878 9.623357138850979 6.301061900577689 10 40.02832358054928 27.489063171867112 17.313255996560038 15.169357251023573 11 30.321187533885475 23.39873618874909 26.059329955691823 20.220746321673616 12 26.663776664360896 20.941572098936227 30.99504103647479 21.399610200228082 13 23.173105685281087 24.611952924900447 32.163505580586666 20.051435809231805 14 19.683486324290975 26.915697620071416 30.789741816074333 22.611074239563276 15 17.756454598141673 23.448395931873844 37.43550075716502 21.35964871281946 16 19.451546112284767 23.82662790480286 33.415047953784885 23.306778029127486 17 19.54327057899755 23.22930882985287 29.32588943521098 27.901531155938603 18 21.464927368243938 22.99748546430107 31.461258389575423 24.076328777879564 19 22.855400175737067 24.215376058628877 29.45535530669857 23.47386845893548 20 25.403821346445067 25.1524846230066 28.35746602105106 21.08622800949728 21 23.82896483389108 27.0586008338163 27.70908504552338 21.40334928676924 22 22.55942810671353 24.580988614481484 28.53577371048253 24.323809568322456 23 21.75050010282488 24.970671539942792 27.75430462338051 25.524523733851822 24 22.43218231785975 23.55846529192918 30.218362654003627 23.790989736207443 25 20.774715362037057 24.86702873488007 27.806067602684664 26.55218830039821 26 19.525860457290285 26.96185196956384 27.299187683448935 26.213099889696945 27 20.462501635850362 26.896184262184747 27.443259361737926 25.19805474022696 28 18.04144310045056 26.56083493802464 30.29489708164295 25.102824879881847 29 20.373347791134623 24.040807455738562 29.00584699657874 26.579997756548075 30 21.84292564826413 25.89539438015293 27.388925760436727 24.872754211146216 31 23.775098618407522 27.431808409205633 24.55598347323749 24.23710949914936 32 24.19481108265251 26.538984651049745 25.570911776253062 23.695292490044682 33 23.249406420011592 25.61823459028959 26.70642562022098 24.425933369477836 34 21.3527547720092 25.10118902952009 28.46087513320496 25.085181065265754 35 20.519289012694202 23.993952027519676 28.25651068443979 27.23024827534633 36 22.465366710912523 25.45383162893305 27.488362093140644 24.59243956701378 37 22.566906279795845 26.511408887808706 28.036839350146757 22.884845482248686 38 22.077670175176202 28.970676213800967 26.62942380676401 22.322229804258818 39 23.399203574566734 26.085737254388754 28.118047635962533 22.39701153508198 40 23.41252407036961 24.10939632447793 28.552599599917738 23.92548000523472 41 20.690936454224232 23.230360447942566 28.342509674886422 27.736193422946776 42 21.154700031782237 23.691436557049116 28.33888743479968 26.81497597636897 43 21.93079418198134 23.564541307558564 28.973831068070073 25.530833442390023 44 21.914318831909366 24.11909458019406 27.7730000560863 26.193586531810283 45 22.528230103385745 24.116991344014657 25.651769522705603 27.703009029893998 46 23.491862812914803 24.727747761221934 27.36263530819421 24.417754117669052 47 20.357456673334703 24.514035596103874 30.348763297126514 24.77974443343491 48 20.99882686159771 23.0071837200172 30.681658845743986 25.312330572641105 49 22.116229505131894 21.35684439791359 32.19914374918208 24.327782347772438 50 22.074865860270336 22.66575838022771 28.838522873861915 26.420852885640038 51 20.13159247695788 22.74451289050085 28.22578006692965 28.89811456561162 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 260.0 1 451.0 2 642.0 3 1044.5 4 1447.0 5 1062.5 6 678.0 7 793.0 8 908.0 9 1040.5 10 1173.0 11 1186.0 12 1199.0 13 1210.5 14 1222.0 15 1249.5 16 1277.0 17 1246.0 18 1215.0 19 1276.0 20 1337.0 21 1732.5 22 2128.0 23 2990.0 24 3852.0 25 3985.5 26 6494.0 27 8869.0 28 8861.0 29 8853.0 30 10297.5 31 11742.0 32 13119.5 33 14497.0 34 17214.0 35 19931.0 36 21233.5 37 22536.0 38 25491.5 39 28447.0 40 33282.5 41 38118.0 42 45265.0 43 52412.0 44 58303.5 45 64195.0 46 75498.0 47 86801.0 48 94518.0 49 102235.0 50 97845.5 51 93456.0 52 78850.0 53 64244.0 54 57133.0 55 50022.0 56 45828.5 57 41635.0 58 37217.5 59 32800.0 60 30701.0 61 28602.0 62 24293.0 63 19984.0 64 18261.5 65 16539.0 66 13517.5 67 10496.0 68 8277.5 69 6059.0 70 5510.5 71 4962.0 72 3884.5 73 2807.0 74 2494.5 75 1549.5 76 917.0 77 781.0 78 645.0 79 442.0 80 239.0 81 184.0 82 129.0 83 70.0 84 11.0 85 6.5 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 855824.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.301362195405865 #Duplication Level Percentage of deduplicated Percentage of total 1 67.36848464683779 17.04514430605282 2 12.555552748154025 6.353451752891368 3 5.649137235221235 4.287926018396584 4 3.0221509517194383 3.0585814335457617 5 1.9514488450032685 2.4687157016617065 6 1.3515833935221204 2.051814058607936 7 0.993449316725741 1.7594934689679516 8 0.7271750606744118 1.4718815671671621 9 0.6266996870566555 1.4270720192971154 >10 4.081343910316167 22.095231109684267 >50 1.3938375821068845 25.079243255030175 >100 0.2689862000200342 9.784590228599646 >500 0.007843508405386933 1.293903434749081 >1k 0.0023069142368785096 1.8229516453483985 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 3909 0.4567527902933313 TruSeq Adapter, Index 14 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGCT 3482 0.4068593542597544 TruSeq Adapter, Index 15 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 3402 0.39751163790685934 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTGC 3353 0.3917861616407112 TruSeq Adapter, Index 14 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTG 1470 0.1717642879844454 TruSeq Adapter, Index 15 (95% over 21bp) TTCCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCT 894 0.1044607302436015 No Hit GCCTGTCTCTTATACACATCTGACGCCCAGAGTTTCGTATGCCGTCTTCTG 879 0.10270803342743368 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1684645441118735E-4 0.0 0.0 0.4245031688758436 0.0 2 1.1684645441118735E-4 0.0 0.0 1.7717427882368337 0.0 3 1.1684645441118735E-4 0.0 0.0 2.507408065209669 0.0 4 1.1684645441118735E-4 0.0 0.0 3.3508057731496197 0.0 5 1.1684645441118735E-4 0.0 0.0 4.761960403073529 0.0 6 1.1684645441118735E-4 0.0 0.0 5.726527884237881 0.0 7 1.1684645441118735E-4 0.0 0.0 6.695535530669857 0.0 8 1.1684645441118735E-4 0.0 0.0 8.208580268840322 0.0 9 1.1684645441118735E-4 0.0 0.0 8.974275084596833 0.0 10 1.1684645441118735E-4 0.0 0.0 10.248836209314064 0.0 11 1.1684645441118735E-4 0.0 0.0 12.319589074389127 0.0 12 1.1684645441118735E-4 0.0 0.0 14.197428443231319 0.0 13 1.1684645441118735E-4 0.0 0.0 14.800356147993046 0.0 14 2.336929088223747E-4 0.0 0.0 15.019793789377255 0.0 15 2.336929088223747E-4 0.0 0.0 15.3597001252594 0.0 16 2.336929088223747E-4 0.0 0.0 16.178092691955356 0.0 17 2.336929088223747E-4 0.0 0.0 17.418184112621287 0.0 18 2.336929088223747E-4 0.0 0.0 18.862873674961207 0.0 19 2.336929088223747E-4 0.0 0.0 19.70837461908056 0.0 20 2.336929088223747E-4 0.0 0.0 20.61486941240255 0.0 21 2.336929088223747E-4 0.0 0.0 21.73963338256464 0.0 22 2.336929088223747E-4 0.0 0.0 22.817541924507843 0.0 23 2.336929088223747E-4 0.0 0.0 23.822538278898467 0.0 24 2.336929088223747E-4 0.0 0.0 24.642449849501766 0.0 25 2.336929088223747E-4 0.0 0.0 25.35310998523061 0.0 26 2.336929088223747E-4 0.0 0.0 25.99681710258184 0.0 27 2.336929088223747E-4 0.0 0.0 26.600562732524445 0.0 28 2.336929088223747E-4 0.0 0.0 27.258875656677073 0.0 29 2.336929088223747E-4 0.0 0.0 27.940324178803117 0.0 30 2.336929088223747E-4 0.0 0.0 28.71478247864047 0.0 31 2.336929088223747E-4 0.0 0.0 29.419249752285516 0.0 32 2.336929088223747E-4 0.0 0.0 30.067280188449963 0.0 33 2.336929088223747E-4 0.0 0.0 30.671610050664622 0.0 34 2.336929088223747E-4 0.0 0.0 31.28271700723513 0.0 35 2.336929088223747E-4 0.0 0.0 31.947105947017143 0.0 36 2.336929088223747E-4 0.0 0.0 32.53519415206865 0.0 37 2.336929088223747E-4 0.0 0.0 33.16709977752435 0.0 38 2.336929088223747E-4 0.0 0.0 33.798421170708 0.0 39 2.336929088223747E-4 0.0 0.0 34.431845800071045 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTAG 35 1.211447E-7 45.000004 36 AAACGTA 35 1.211447E-7 45.000004 35 TTTTACG 175 0.0 45.000004 1 TGATCGA 20 7.032277E-4 45.0 32 TCACGCG 20 7.032277E-4 45.0 23 TATCACT 20 7.032277E-4 45.0 29 GGTACGC 25 3.8899674E-5 45.0 8 ACACGAT 20 7.032277E-4 45.0 39 GCGACGT 20 7.032277E-4 45.0 15 CTCCGTA 20 7.032277E-4 45.0 21 TAGACTC 20 7.032277E-4 45.0 19 TCCGATT 20 7.032277E-4 45.0 25 CTTCACG 25 3.8899674E-5 45.0 1 CGTTGAC 20 7.032277E-4 45.0 21 TAGCGAC 20 7.032277E-4 45.0 12 ATAGCGA 20 7.032277E-4 45.0 11 CACGCGA 20 7.032277E-4 45.0 13 CACGATT 25 3.8899674E-5 45.0 13 ACGGGTA 25 3.8899674E-5 45.0 5 TGCATCG 20 7.032277E-4 45.0 18 >>END_MODULE