##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935344.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 890500 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.41109152161707 33.0 31.0 34.0 31.0 34.0 2 32.55970129140932 34.0 31.0 34.0 31.0 34.0 3 32.61235934868051 34.0 31.0 34.0 31.0 34.0 4 36.03348792813026 37.0 35.0 37.0 35.0 37.0 5 31.780715328467153 37.0 35.0 37.0 0.0 37.0 6 33.495427288040425 37.0 35.0 37.0 17.0 37.0 7 35.324752386299835 37.0 35.0 37.0 32.0 37.0 8 35.863385738349244 37.0 35.0 37.0 35.0 37.0 9 37.89932622122403 39.0 38.0 39.0 35.0 39.0 10 37.62031667602471 39.0 37.0 39.0 35.0 39.0 11 37.48960808534531 39.0 37.0 39.0 35.0 39.0 12 37.296946659180236 39.0 37.0 39.0 35.0 39.0 13 37.21542953396968 39.0 37.0 39.0 34.0 39.0 14 38.41661089275688 40.0 38.0 41.0 34.0 41.0 15 38.511630544637846 40.0 38.0 41.0 34.0 41.0 16 38.59890960134756 40.0 38.0 41.0 35.0 41.0 17 38.590516563728244 40.0 38.0 41.0 35.0 41.0 18 38.570907355418306 40.0 38.0 41.0 35.0 41.0 19 38.60349691184728 40.0 38.0 41.0 35.0 41.0 20 38.52483997754071 40.0 38.0 41.0 34.0 41.0 21 38.46546771476699 40.0 37.0 41.0 34.0 41.0 22 38.41874340258282 40.0 37.0 41.0 34.0 41.0 23 38.367825940482874 40.0 37.0 41.0 34.0 41.0 24 38.362687254351485 40.0 37.0 41.0 34.0 41.0 25 38.260997192588434 40.0 37.0 41.0 34.0 41.0 26 38.2012363840539 40.0 37.0 41.0 34.0 41.0 27 38.12799213924762 40.0 37.0 41.0 34.0 41.0 28 38.117371139809094 40.0 37.0 41.0 34.0 41.0 29 38.06164177428411 40.0 37.0 41.0 34.0 41.0 30 38.00745648512072 40.0 36.0 41.0 34.0 41.0 31 37.81730825379 40.0 36.0 41.0 34.0 41.0 32 37.871007299270076 40.0 36.0 41.0 34.0 41.0 33 37.844133632790566 40.0 36.0 41.0 33.0 41.0 34 37.865080291970806 40.0 36.0 41.0 34.0 41.0 35 37.80573161145424 40.0 36.0 41.0 33.0 41.0 36 37.780428972487364 40.0 36.0 41.0 33.0 41.0 37 37.748353733857385 40.0 36.0 41.0 33.0 41.0 38 37.733120718697364 40.0 36.0 41.0 33.0 41.0 39 37.730625491297026 40.0 36.0 41.0 33.0 41.0 40 37.69852554744526 40.0 36.0 41.0 33.0 41.0 41 37.66284222346996 40.0 36.0 41.0 33.0 41.0 42 37.661274564851205 40.0 36.0 41.0 33.0 41.0 43 37.60267040988209 40.0 35.0 41.0 33.0 41.0 44 37.52933520494104 40.0 35.0 41.0 33.0 41.0 45 37.480471645143176 39.0 35.0 41.0 33.0 41.0 46 37.40221673217294 39.0 35.0 41.0 33.0 41.0 47 37.35419988770354 39.0 35.0 41.0 33.0 41.0 48 37.35723862998316 39.0 35.0 41.0 33.0 41.0 49 37.33498820887142 39.0 35.0 41.0 33.0 41.0 50 37.25983380123526 39.0 35.0 41.0 33.0 41.0 51 36.64919708029197 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 6.0 11 4.0 12 3.0 13 15.0 14 17.0 15 23.0 16 21.0 17 41.0 18 76.0 19 133.0 20 249.0 21 476.0 22 767.0 23 1198.0 24 1700.0 25 2509.0 26 3544.0 27 4419.0 28 5649.0 29 7445.0 30 9990.0 31 13653.0 32 18758.0 33 29115.0 34 49248.0 35 77433.0 36 68151.0 37 107978.0 38 185662.0 39 301880.0 40 332.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.051656372824258 4.544750140370579 58.80078607523863 15.602807411566536 2 18.25098259404829 4.537450870297586 55.40033688938798 21.811229646266142 3 20.09533969679955 4.9271195957327345 53.76103312745648 21.21650758001123 4 19.29298147108366 4.443571027512633 51.66108927568781 24.60235822571589 5 16.00393037619315 16.635710275126332 45.09500280741157 22.26535654126895 6 20.749241998877036 6.788321167883211 52.87827063447501 19.584166198764738 7 84.33329590117911 2.032453677709152 8.916788321167884 4.717462099943852 8 86.29904548006738 2.476698483997754 6.119595732734419 5.10466030320045 9 80.24536777091522 5.4561482313307135 8.34553621560921 5.952947782144862 10 37.42201010668164 35.61953958450309 14.24413250982594 12.714317798989333 11 27.71476698483998 25.117798989331835 29.212352610892754 17.955081414935428 12 26.843795620437955 22.062436833239754 31.597304884896126 19.496462661426165 13 22.871083660864684 24.348905109489053 33.11836047164514 19.661650758001123 14 18.191128579449746 30.337338573834927 30.20224592925323 21.2692869174621 15 16.014486243683322 26.41448624368332 38.03874227961819 19.53228523301516 16 18.7149915777653 25.424031443009543 34.941381246490735 20.919595732734418 17 19.294104435710274 23.964177428411006 30.57900056148231 26.162717574396403 18 19.60247052217855 24.950701852891637 32.09466591802359 23.352161706906234 19 23.6550252667041 25.561033127456483 29.524761370016844 21.259180235822573 20 26.708478382930938 26.123413812464907 28.254463784390794 18.913644020213365 21 24.507580011229646 26.815160022459295 28.658394160583946 20.01886580572712 22 22.114317798989333 25.209994385176866 28.521729365524983 24.153958450308817 23 21.023919146546884 27.439528354856822 28.46535654126895 23.071195957327344 24 21.461763054463784 25.233576642335763 30.1100505334082 23.19460976979225 25 20.921504772599665 27.29612577203818 28.321392476137003 23.460976979225155 26 20.103312745648513 29.66311061201572 27.624031443009546 22.609545199326224 27 20.706120157215047 28.140819764177426 30.145760808534533 21.007299270072995 28 19.501403705783268 27.471308253790006 32.10836608646828 20.91892195395845 29 21.28107804604155 25.86524424480629 31.07164514317799 21.78203256597417 30 22.57102751263335 26.77361033127457 29.50084222346996 21.154519932622122 31 23.893318360471646 29.184503088152724 25.644357102751265 21.27782144862437 32 23.693542953396967 29.088826501965187 25.962492981471087 21.25513756316676 33 22.563391353172374 28.619988770353732 27.694441325098257 21.12217855137563 34 22.41729365524986 26.139247613700167 28.2078607523863 23.235597978663673 35 21.559573273441888 25.880067377877598 28.555306007860754 24.005053340819764 36 23.732622122403143 26.120718697361035 29.01650758001123 21.130151600224593 37 23.044469399213924 27.092083099382368 30.001347557551938 19.862099943851767 38 20.56226838854576 28.80179674340258 27.301179112857945 23.33475575519371 39 21.205165637282423 27.755642897248737 28.615384615384613 22.423806850084222 40 23.51521617069062 25.72992700729927 28.34868051656373 22.40617630544638 41 20.693542953396967 25.417405951712517 28.27175743964065 25.617293655249863 42 22.425491297024145 24.056035934868053 28.344188658057273 25.174284110050532 43 22.623357664233577 24.704772599663112 29.475575519371137 23.19629421673217 44 21.754070746771475 26.299045480067377 28.47389107243122 23.47299270072993 45 21.5621560920831 26.650308815272318 26.904884896125775 24.88265019651881 46 23.135654126895002 26.568669286917462 27.631330713082537 22.664345873104995 47 20.469511510387424 25.94104435710275 30.499719258843346 23.08972487366648 48 20.339584503088155 24.59449747332959 30.54418865805727 24.521729365524987 49 21.559573273441888 24.122515440763618 31.365075800112297 22.9528354856822 50 20.61167883211679 24.90555867490174 29.322066254912972 25.160696238068503 51 19.48871420550253 25.26524424480629 26.768781583380125 28.477259966311063 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 148.0 1 331.5 2 515.0 3 879.5 4 1244.0 5 978.5 6 713.0 7 859.0 8 1005.0 9 1105.5 10 1206.0 11 1255.5 12 1305.0 13 1304.0 14 1303.0 15 1445.5 16 1588.0 17 1766.0 18 1944.0 19 2285.0 20 2626.0 21 2782.0 22 2938.0 23 4263.0 24 5588.0 25 5795.5 26 8224.0 27 10445.0 28 12540.0 29 14635.0 30 16057.0 31 17479.0 32 20796.0 33 24113.0 34 26745.0 35 29377.0 36 30273.5 37 31170.0 38 34750.5 39 38331.0 40 43687.5 41 49044.0 42 55318.0 43 61592.0 44 65423.5 45 69255.0 46 80183.5 47 91112.0 48 98385.5 49 105659.0 50 98873.5 51 92088.0 52 76438.0 53 60788.0 54 50845.0 55 40902.0 56 35840.5 57 30779.0 58 30788.5 59 30798.0 60 27849.0 61 24900.0 62 20927.0 63 16954.0 64 13290.0 65 9626.0 66 7694.0 67 5762.0 68 4187.0 69 2612.0 70 2424.5 71 2237.0 72 1898.5 73 1560.0 74 1036.5 75 492.0 76 471.0 77 270.0 78 69.0 79 70.5 80 72.0 81 49.5 82 27.0 83 14.5 84 2.0 85 1.5 86 1.0 87 1.0 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 890500.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.777400924499105 #Duplication Level Percentage of deduplicated Percentage of total 1 66.9206074010794 15.911981122864669 2 12.516546357871539 5.9522188188238125 3 5.594011695829019 3.9903317660419124 4 3.1405304236475278 2.9869460399461722 5 2.0251604946158177 2.407652650846861 6 1.3538827151662511 1.9315087273954428 7 1.02069200002268 1.6988582033477677 8 0.7772943400324549 1.478563132743649 9 0.5940271524209049 1.2711979586835354 >10 4.1957345166129185 20.4079959992021 >50 1.3902258626029143 24.16535500742864 >100 0.4604148215205558 14.696919326860952 >500 0.008508692800174543 1.3652863593586675 >1k 0.0023635257778262617 1.7351848864558415 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 3980 0.4469399213924761 No Hit CTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGCT 3771 0.42346996069623805 No Hit TCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 3539 0.3974171813587872 No Hit GCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTGC 2610 0.29309376754632227 No Hit TCCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTG 1538 0.17271195957327345 No Hit GCCTGTCTCTTATACACATCTGACGCGTGAAGCTTCGTATGCCGTCTTCTG 909 0.10207748455923638 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.44042672655811343 0.0 2 0.0 0.0 0.0 1.6622122403144302 0.0 3 0.0 0.0 0.0 2.365637282425604 0.0 4 0.0 0.0 0.0 3.1237507018528916 0.0 5 0.0 0.0 0.0 4.4139247613700165 0.0 6 0.0 0.0 0.0 5.21414935429534 0.0 7 0.0 0.0 0.0 5.971925884334643 0.0 8 0.0 0.0 0.0 7.278944413250983 0.0 9 0.0 0.0 0.0 7.9112857944974735 0.0 10 0.0 0.0 0.0 9.050758001122965 0.0 11 0.0 0.0 0.0 10.919371139809096 0.0 12 0.0 0.0 0.0 12.693430656934307 0.0 13 0.0 0.0 0.0 13.264907355418304 0.0 14 0.0 0.0 0.0 13.438517686692869 0.0 15 0.0 0.0 0.0 13.735878719820326 0.0 16 0.0 0.0 0.0 14.454463784390791 0.0 17 0.0 0.0 0.0 15.569567658618753 0.0 18 0.0 0.0 0.0 16.876024705221784 0.0 19 0.0 0.0 0.0 17.713307130825378 0.0 20 0.0 0.0 0.0 18.554070746771476 0.0 21 0.0 0.0 0.0 19.59910162829871 0.0 22 4.4918585064570465E-4 0.0 0.0 20.65266704098821 0.0 23 4.4918585064570465E-4 0.0 0.0 21.611454239191467 0.0 24 4.4918585064570465E-4 0.0 0.0 22.310050533408198 0.0 25 4.4918585064570465E-4 0.0 0.0 22.912296462661427 0.0 26 4.4918585064570465E-4 0.0 0.0 23.466254912970243 0.0 27 4.4918585064570465E-4 0.0 0.0 24.045929253228522 0.0 28 4.4918585064570465E-4 0.0 0.0 24.655699045480066 0.0 29 4.4918585064570465E-4 0.0 0.0 25.33239752947782 0.0 30 4.4918585064570465E-4 0.0 0.0 26.08276249298147 0.0 31 4.4918585064570465E-4 0.0 0.0 26.779786636720942 0.0 32 4.4918585064570465E-4 0.0 0.0 27.414261650758 0.0 33 4.4918585064570465E-4 0.0 0.0 28.010555867490176 0.0 34 4.4918585064570465E-4 0.0 0.0 28.620887142055025 0.0 35 4.4918585064570465E-4 0.0 0.0 29.285569904548005 0.0 36 4.4918585064570465E-4 0.0 0.0 29.92902863559798 0.0 37 4.4918585064570465E-4 0.0 0.0 30.570578326782705 0.0 38 5.614823133071309E-4 0.0 0.0 31.202695115103875 0.0 39 5.614823133071309E-4 0.0 0.0 31.8628860190904 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGAT 20 7.032431E-4 45.0 18 AGCGTCC 20 7.032431E-4 45.0 43 CTATGCG 20 7.032431E-4 45.0 1 CGGCGGA 25 3.8900962E-5 45.0 10 ATCTCGG 20 7.032431E-4 45.0 12 AAATCGA 20 7.032431E-4 45.0 23 GCGACAT 25 3.8900962E-5 45.0 37 GCGACAG 40 6.8121153E-9 45.0 36 CGAGTAC 25 3.8900962E-5 45.0 13 CGAAACT 25 3.8900962E-5 45.0 27 TCCGATC 20 7.032431E-4 45.0 16 CTATCGA 35 1.2115197E-7 45.0 32 GACACGT 20 7.032431E-4 45.0 21 TTTCGTC 25 3.8900962E-5 45.0 44 CCGGCAT 20 7.032431E-4 45.0 34 GACCGTA 20 7.032431E-4 45.0 9 TAGCGCG 20 7.032431E-4 45.0 2 GCCGGTC 25 3.8900962E-5 45.0 28 CGCGCAC 20 7.032431E-4 45.0 17 CCTACCG 25 3.8900962E-5 45.0 20 >>END_MODULE