##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935341.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 540166 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38364502763965 33.0 31.0 34.0 31.0 34.0 2 32.54666343309279 34.0 31.0 34.0 31.0 34.0 3 32.58833580788128 34.0 31.0 34.0 31.0 34.0 4 36.01515274934002 37.0 35.0 37.0 35.0 37.0 5 31.920492959571686 37.0 35.0 37.0 0.0 37.0 6 33.58200627214597 37.0 35.0 37.0 17.0 37.0 7 35.29211760829079 37.0 35.0 37.0 32.0 37.0 8 35.79983375480871 37.0 35.0 37.0 35.0 37.0 9 37.81142648741313 39.0 38.0 39.0 35.0 39.0 10 37.595931621020206 39.0 37.0 39.0 35.0 39.0 11 37.520014217851546 39.0 37.0 39.0 35.0 39.0 12 37.17413165582432 39.0 37.0 39.0 34.0 39.0 13 37.00814564411681 39.0 35.0 39.0 33.0 39.0 14 38.16754479178623 40.0 37.0 41.0 33.0 41.0 15 38.31880570046985 40.0 37.0 41.0 34.0 41.0 16 38.403529655698435 40.0 37.0 41.0 34.0 41.0 17 38.395126683278846 40.0 37.0 41.0 34.0 41.0 18 38.40272805026603 40.0 37.0 41.0 34.0 41.0 19 38.41721063524916 40.0 37.0 41.0 34.0 41.0 20 38.32513338492241 40.0 37.0 41.0 34.0 41.0 21 38.266973485928396 40.0 37.0 41.0 34.0 41.0 22 38.2236979002751 40.0 36.0 41.0 34.0 41.0 23 38.191868795888674 40.0 36.0 41.0 34.0 41.0 24 38.16024333260516 40.0 36.0 41.0 34.0 41.0 25 38.04369397555566 40.0 36.0 41.0 34.0 41.0 26 37.96363895543222 40.0 36.0 41.0 34.0 41.0 27 37.87879281554189 40.0 36.0 41.0 34.0 41.0 28 37.84724695741679 40.0 36.0 41.0 34.0 41.0 29 37.801733170914126 40.0 36.0 41.0 34.0 41.0 30 37.78137276318761 40.0 36.0 41.0 34.0 41.0 31 37.58350210861106 40.0 35.0 41.0 33.0 41.0 32 37.606017409463014 40.0 35.0 41.0 33.0 41.0 33 37.5924882350981 40.0 35.0 41.0 33.0 41.0 34 37.56575015828467 40.0 35.0 41.0 33.0 41.0 35 37.49963159473199 39.0 35.0 41.0 33.0 41.0 36 37.47690709892885 39.0 35.0 41.0 33.0 41.0 37 37.42172961645124 39.0 35.0 41.0 33.0 41.0 38 37.46789505448325 39.0 35.0 41.0 33.0 41.0 39 37.45581173194907 39.0 35.0 41.0 33.0 41.0 40 37.371037792086135 39.0 35.0 41.0 33.0 41.0 41 37.30804789638741 39.0 35.0 41.0 33.0 41.0 42 37.300509473013854 39.0 35.0 41.0 33.0 41.0 43 37.234429786399 39.0 35.0 41.0 33.0 41.0 44 37.17918565774225 39.0 35.0 41.0 33.0 41.0 45 37.1516830011515 39.0 35.0 41.0 33.0 41.0 46 37.06326388554629 39.0 35.0 41.0 33.0 41.0 47 37.01697441156978 39.0 35.0 41.0 33.0 41.0 48 37.00325270379846 39.0 35.0 41.0 33.0 41.0 49 37.01049862449691 39.0 35.0 41.0 33.0 41.0 50 36.93035289151853 39.0 35.0 41.0 33.0 41.0 51 36.323502404816296 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 6.0 11 5.0 12 5.0 13 4.0 14 11.0 15 13.0 16 21.0 17 33.0 18 49.0 19 102.0 20 170.0 21 332.0 22 557.0 23 828.0 24 1273.0 25 1742.0 26 2288.0 27 2903.0 28 3771.0 29 4674.0 30 6180.0 31 8658.0 32 12076.0 33 19710.0 34 34835.0 35 57161.0 36 42730.0 37 65459.0 38 109461.0 39 164908.0 40 195.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.43384441079224 5.21932146784507 56.24937519207058 16.09745892929211 2 19.90665832355239 5.33243484410348 51.820551460106714 22.940355372237423 3 20.764542751672636 5.150083492852197 51.18315480796644 22.90221894750873 4 18.299189508410375 4.812779775106171 51.28034715254199 25.607683563941453 5 17.39965121832918 16.499557543421837 43.5706801242581 22.530111113990884 6 21.869018042601716 6.395996786173138 53.13237041946365 18.602614751761497 7 82.0560716520477 2.961682149561431 9.639073914315228 5.343172284075636 8 83.32531110806678 3.6461013836487304 7.276651992165371 5.751935516119119 9 77.11296157107259 6.300285467800639 10.108744348959393 6.478008612167371 10 39.77258842652074 28.269087650833264 16.796503297134585 15.161820625511416 11 34.127286797021654 24.17553122558621 23.350599630483963 18.34658234690817 12 30.132033486002452 21.1827475257606 28.121540415353795 20.563678572883152 13 24.52597905088436 26.84915377865323 28.72728013240374 19.89758703805867 14 18.394160313681347 31.270942636152586 28.55659186250153 21.778305187664532 15 15.834576778249648 24.38546668986941 39.176845636341426 20.60311089553952 16 19.168366761328926 22.06247709037592 35.18344360807604 23.585712540219117 17 17.945039117604587 22.992746674170533 29.693279473347083 29.3689347348778 18 21.0078013055246 22.26482229536846 32.25193736740187 24.47543903170507 19 24.440449787657865 23.695863864071416 29.098277196269294 22.76540915200142 20 27.585594058122876 25.454027095374386 26.68105730460636 20.27932154189638 21 24.809595568769602 25.717094374692223 27.728142830167023 21.745167226371155 22 22.988303595561366 25.008608464805267 27.139620042727607 24.863467896905767 23 21.945661148609872 25.802993894469477 26.48111876719379 25.770226189726863 24 23.26118267347445 22.769852230610592 29.258968539300884 24.70999655661408 25 20.79823609779216 26.303025366276295 27.504693001780932 25.39404553415061 26 19.70542388821214 29.970601629869336 25.973126779545545 24.350847702372974 27 20.82119200393953 29.841567221928074 27.127401576552394 22.209839197580003 28 19.052106204389023 28.634901122988122 29.178622867785087 23.134369804837775 29 19.671730542092618 27.10407541385426 28.344434858913743 24.879759185139385 30 21.317706038514086 27.62095355872084 25.872046741186967 25.189293661578105 31 23.234709330094823 29.323578307409203 22.558435740124335 24.883276622371643 32 23.668464879314875 28.047859361751758 23.856740335378383 24.426935423554983 33 22.535109577426198 28.078405527189794 23.7278910557125 25.658593839671507 34 19.643035659408405 28.49031593991477 26.39299770811195 25.47365069256488 35 19.681912597238625 27.490252996301134 25.717094374692223 27.11074003176801 36 23.64199153593525 28.64415753675722 23.674759240677865 24.039091686629664 37 21.143500331379613 29.951903674055753 26.492781848542858 22.411814146021776 38 21.449887627136842 27.631135613866846 23.57478997197158 27.344186787024725 39 20.646616040254294 26.717897831407385 26.280995101505834 26.354491026832495 40 22.12949352606421 25.49623634216148 25.888338029420588 26.485932102353722 41 17.987803749217832 27.990839852934098 25.657483070019214 28.363873327828852 42 21.246801909042777 27.665569473087903 25.292039854415123 25.795588763454198 43 22.633042435103285 26.96615484869466 25.315736273664026 25.085066442538036 44 21.12739417142138 26.96226715491164 25.24538752901886 26.664951144648125 45 21.086665950837336 26.778990162283446 23.86932905810436 28.26501482877486 46 22.474757759651663 26.618483947527245 25.785776964858954 25.120981327962145 47 18.839949200801236 27.94307675788554 28.006390628066185 25.21058341324704 48 19.549175623789726 26.81897786976596 26.887105075106543 26.744741431337776 49 21.356397848068926 24.282165112206247 28.996086388258423 25.3653506514664 50 20.555903185317106 24.770718630939378 26.524994168459326 28.14838401528419 51 18.856795873861 25.029157703372668 25.13856851412344 30.9754779086429 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 173.0 1 286.0 2 399.0 3 592.5 4 786.0 5 622.0 6 458.0 7 553.0 8 648.0 9 696.5 10 745.0 11 759.0 12 773.0 13 891.5 14 1010.0 15 1036.5 16 1063.0 17 1179.0 18 1295.0 19 1234.0 20 1173.0 21 1415.5 22 1658.0 23 1741.5 24 1825.0 25 2153.5 26 2702.0 27 2922.0 28 3724.0 29 4526.0 30 5221.0 31 5916.0 32 7855.0 33 9794.0 34 11892.5 35 13991.0 36 14387.0 37 14783.0 38 15878.0 39 16973.0 40 21591.0 41 26209.0 42 30955.0 43 35701.0 44 39284.5 45 42868.0 46 48664.0 47 54460.0 48 59333.0 49 64206.0 50 60959.5 51 57713.0 52 48849.0 53 39985.0 54 34250.5 55 28516.0 56 26775.5 57 25035.0 58 23552.0 59 22069.0 60 20371.5 61 18674.0 62 16296.5 63 13919.0 64 12343.0 65 10767.0 66 8402.5 67 6038.0 68 5230.0 69 4422.0 70 3396.0 71 2370.0 72 2195.5 73 2021.0 74 1577.5 75 714.5 76 295.0 77 250.5 78 206.0 79 166.5 80 127.0 81 68.0 82 9.0 83 15.0 84 21.0 85 14.5 86 8.0 87 4.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 540166.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.733003605150305 #Duplication Level Percentage of deduplicated Percentage of total 1 67.80433096168494 16.770047621201577 2 12.412014172347217 6.139727825436808 3 5.413945618463318 4.017094094986228 4 2.9856675190787905 2.9537810205262356 5 2.0004101178880624 2.4738075328752296 6 1.3269393746135965 1.9691517801680385 7 0.9622408167926924 1.66593739135295 8 0.7495524321632135 1.4830946405553551 9 0.5904140374199159 1.3142441264434315 >10 3.9405999359208534 20.588323459056674 >50 1.464310813317088 26.27425274862564 >100 0.3390719711164568 11.514049494917167 >500 0.00750159228133754 1.1792725932143078 >1k 0.003000636912535016 1.6572156706403707 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC 2544 0.470966332571839 No Hit CTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGCT 2513 0.46522735603499665 No Hit TCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC 2081 0.3852519410699674 No Hit GCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTGC 1794 0.3321201260353299 No Hit TGTTTGGGGTGGTATCAAACCAAGCAGAGACTTTGGTGCTGGTTGGAAACA 893 0.16531954991613687 No Hit TCCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTG 829 0.1534713402916881 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGC 766 0.14180825894262133 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCG 624 0.11552004383837561 No Hit TGCTGTCTCTTATACACATCTGACGCAAGCCACATCGTATGCCGTCTTCTG 566 0.1047826038662189 No Hit TTACCTGGGTACCTTGATTATGTTAGTTGGCACTGGATTCCAAATTCTACC 564 0.10441234731545489 No Hit TTTCTTGGGGGACAATAGGAATTGAACCTACACTTAAGAATTCAAAATTCT 548 0.1014502949093427 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4783714635871195 0.0 2 0.0 0.0 0.0 1.7511283568384535 0.0 3 0.0 0.0 0.0 2.4361029757518984 0.0 4 0.0 0.0 0.0 3.1986463420504068 0.0 5 0.0 0.0 0.0 4.510835557958109 0.0 6 0.0 0.0 0.0 5.345208695104838 0.0 7 0.0 0.0 0.0 6.145518229581277 0.0 8 0.0 0.0 0.0 7.440860772429216 0.0 9 0.0 0.0 0.0 8.125835391342662 0.0 10 0.0 0.0 0.0 9.372859454315895 0.0 11 0.0 0.0 0.0 11.181562704798155 0.0 12 0.0 0.0 0.0 12.988229544251212 0.0 13 0.0 0.0 0.0 13.528804108366687 0.0 14 0.0 0.0 0.0 13.733555980939192 0.0 15 0.0 0.0 0.0 14.073081237989802 0.0 16 1.851282753820122E-4 0.0 0.0 14.850064609768108 0.0 17 1.851282753820122E-4 0.0 0.0 16.000821969542695 0.0 18 1.851282753820122E-4 0.0 0.0 17.334115808843947 0.0 19 1.851282753820122E-4 0.0 0.0 18.16682279151224 0.0 20 1.851282753820122E-4 0.0 0.0 18.986941051454554 0.0 21 1.851282753820122E-4 0.0 0.0 19.970527578559185 0.0 22 1.851282753820122E-4 0.0 0.0 20.944487435343948 0.0 23 1.851282753820122E-4 0.0 0.0 21.87734881499391 0.0 24 1.851282753820122E-4 0.0 0.0 22.58787113591007 0.0 25 1.851282753820122E-4 0.0 0.0 23.21397496325204 0.0 26 1.851282753820122E-4 0.0 0.0 23.74603362669994 0.0 27 1.851282753820122E-4 0.0 0.0 24.31011948178893 0.0 28 1.851282753820122E-4 0.0 0.0 24.899012525779114 0.0 29 1.851282753820122E-4 0.0 0.0 25.515489682801213 0.0 30 1.851282753820122E-4 0.0 0.0 26.191948401047085 0.0 31 1.851282753820122E-4 0.0 0.0 26.805648633938457 0.0 32 1.851282753820122E-4 0.0 0.0 27.42879040887431 0.0 33 1.851282753820122E-4 0.0 0.0 28.03601115212731 0.0 34 1.851282753820122E-4 0.0 0.0 28.618424706479118 0.0 35 1.851282753820122E-4 0.0 0.0 29.179363380886617 0.0 36 1.851282753820122E-4 0.0 0.0 29.74122769667102 0.0 37 3.702565507640244E-4 0.0 0.0 30.331786895139643 0.0 38 3.702565507640244E-4 0.0 0.0 30.89179992817023 0.0 39 3.702565507640244E-4 0.0 0.0 31.538267865804215 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTTCG 20 7.029961E-4 45.000004 1 GTCATAG 20 7.029961E-4 45.000004 45 CGGGTGC 55 1.8189894E-12 45.000004 6 AGCGTAA 20 7.029961E-4 45.000004 11 TACCCTC 20 7.029961E-4 45.000004 23 ACGCCCG 20 7.029961E-4 45.000004 37 AATTTCG 20 7.029961E-4 45.000004 26 AATCACG 20 7.029961E-4 45.000004 21 TACTTAG 20 7.029961E-4 45.000004 29 GATCGAG 20 7.029961E-4 45.000004 12 GTTTCGT 20 7.029961E-4 45.000004 36 CAACGGT 20 7.029961E-4 45.000004 42 TTAGCGA 20 7.029961E-4 45.000004 27 CCCTACC 20 7.029961E-4 45.000004 21 CGTTGTG 20 7.029961E-4 45.000004 13 GACGTCA 30 2.1633568E-6 45.000004 10 GAGTAGA 20 7.029961E-4 45.000004 32 CGCATCG 20 7.029961E-4 45.000004 27 TCTTACG 55 1.8189894E-12 45.000004 1 TTCACGT 30 2.1633568E-6 45.000004 17 >>END_MODULE