##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935338.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2950406 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27358980425067 33.0 31.0 34.0 30.0 34.0 2 32.415785149569246 34.0 31.0 34.0 30.0 34.0 3 32.49580091689076 34.0 31.0 34.0 30.0 34.0 4 35.99623475548789 37.0 35.0 37.0 35.0 37.0 5 31.97953569779888 37.0 35.0 37.0 0.0 37.0 6 33.32526574308756 37.0 35.0 37.0 17.0 37.0 7 35.18140689789812 37.0 35.0 37.0 32.0 37.0 8 35.57026388910543 37.0 35.0 37.0 33.0 37.0 9 37.62702319612962 39.0 37.0 39.0 35.0 39.0 10 37.444111081661305 39.0 37.0 39.0 35.0 39.0 11 37.35722134513013 39.0 37.0 39.0 34.0 39.0 12 37.2567250066601 39.0 37.0 39.0 34.0 39.0 13 37.18155264055184 39.0 37.0 39.0 33.0 39.0 14 38.45053053715319 40.0 38.0 41.0 34.0 41.0 15 38.46049763998582 40.0 38.0 41.0 34.0 41.0 16 38.59191412978417 40.0 38.0 41.0 34.0 41.0 17 38.454205285645436 40.0 38.0 41.0 34.0 41.0 18 38.476606948331856 40.0 38.0 41.0 34.0 41.0 19 38.473091161013095 40.0 38.0 41.0 34.0 41.0 20 38.178486960777605 40.0 37.0 41.0 33.0 41.0 21 38.30799151032095 40.0 37.0 41.0 34.0 41.0 22 38.312963368431326 40.0 38.0 41.0 34.0 41.0 23 37.992417992642366 40.0 37.0 41.0 33.0 41.0 24 38.092493711035026 40.0 37.0 41.0 33.0 41.0 25 38.15255730906187 40.0 37.0 41.0 34.0 41.0 26 38.108987373263204 40.0 37.0 41.0 33.0 41.0 27 37.872954773004125 40.0 37.0 41.0 33.0 41.0 28 37.820689762697064 40.0 37.0 41.0 33.0 41.0 29 37.80099891336989 40.0 37.0 41.0 33.0 41.0 30 37.7728221132956 40.0 37.0 41.0 33.0 41.0 31 37.5536309240152 40.0 36.0 41.0 32.0 41.0 32 37.36659293670092 40.0 36.0 41.0 31.0 41.0 33 37.28915105243143 40.0 36.0 41.0 31.0 41.0 34 37.1287812592572 40.0 36.0 41.0 31.0 41.0 35 37.08218665498918 40.0 36.0 41.0 31.0 41.0 36 36.97856633968342 40.0 36.0 41.0 31.0 41.0 37 36.92948767051043 40.0 36.0 41.0 31.0 41.0 38 36.912147006208635 40.0 35.0 41.0 31.0 41.0 39 36.92171009684769 40.0 36.0 41.0 31.0 41.0 40 36.961602233726474 40.0 35.0 41.0 31.0 41.0 41 36.794858741474904 40.0 35.0 41.0 30.0 41.0 42 36.667304093063805 40.0 35.0 41.0 30.0 41.0 43 36.63083860322952 40.0 35.0 41.0 31.0 41.0 44 36.72933996202556 39.0 35.0 41.0 31.0 41.0 45 36.590484157095666 39.0 35.0 41.0 30.0 41.0 46 36.5119105641732 39.0 35.0 41.0 30.0 41.0 47 36.386305139021545 39.0 35.0 41.0 30.0 41.0 48 36.433988407019235 39.0 35.0 41.0 30.0 41.0 49 36.42190193485236 39.0 35.0 41.0 31.0 41.0 50 36.29759870336489 39.0 35.0 41.0 30.0 41.0 51 35.825774486629975 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 14.0 10 18.0 11 15.0 12 22.0 13 27.0 14 33.0 15 39.0 16 82.0 17 173.0 18 421.0 19 1208.0 20 3497.0 21 7740.0 22 13542.0 23 19336.0 24 24338.0 25 26223.0 26 25418.0 27 23787.0 28 24673.0 29 29214.0 30 37225.0 31 49714.0 32 65670.0 33 91902.0 34 143253.0 35 195701.0 36 225212.0 37 354695.0 38 593907.0 39 992088.0 40 1217.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.314741089870346 3.7524666096801593 49.89296388361466 15.039828416834835 2 16.52084492778282 15.813620227182293 47.92672601669059 19.738808828344304 3 17.476340544318308 15.652794903481078 47.55667525079599 19.314189301404618 4 16.276742929617143 4.003245655004769 57.66362324371629 22.056388171661798 5 23.528829591588412 15.407777777024586 40.00157944364267 21.06181318774433 6 19.00118153230437 15.188452029991806 48.63950927431682 17.170857163387005 7 76.1669071985347 1.9331237802526162 17.488779510345356 4.411189510867318 8 77.25248660692799 11.342201717322972 6.88078183138185 4.524529844367182 9 72.51612151005659 5.044288819911564 7.697313522274561 14.742276147757291 10 38.766325719239994 33.35147772882783 14.36626010115218 13.515936450779995 11 29.809355051474274 22.602584186718712 29.151377810375926 18.43668295143109 12 23.264154153699526 20.353808933414587 30.49404048120835 25.88799643167754 13 25.443718593305466 20.46301424278557 35.26301126014522 18.830255903763753 14 19.145873483174856 29.512175612441133 28.834438378989198 22.50751252539481 15 16.29704522021715 23.47717568361778 35.831916014270575 24.393863081894494 16 18.020469047310776 24.63759225001576 29.409477882027087 27.932460820646376 17 18.62380974008323 27.792581766712786 30.834197056269545 22.74941143693444 18 18.462374330854807 23.92626641892675 30.531187911087493 27.080171339130953 19 19.658209751471492 25.850815108158 28.859926396570508 25.631048743800005 20 26.07681790234971 25.12396598976548 30.927641822854213 17.871574285030604 21 23.16088023139866 30.809827528821458 27.376672905356074 18.652619334423804 22 21.077370368688243 22.379462351961052 32.6742488999819 23.868918379368807 23 23.0575046281766 27.173006020188406 28.671003244977133 21.098486106657862 24 21.0052447019156 26.471204302051987 28.211032651099544 24.31251834493287 25 19.341473681927166 32.64584602932613 25.354985042736487 22.65769524601021 26 20.35885908583429 25.208361154363164 30.960959271368075 23.47182048843447 27 25.20178578812543 26.22259444971302 26.5269593405111 22.048660421650442 28 18.224508762522852 28.974147964720785 31.208281165371815 21.59306210738454 29 23.07519710846575 22.429591046113654 30.595958657893185 23.89925318752741 30 21.563574640235956 28.74733172315946 28.764244649719394 20.924848986885195 31 22.083299722139934 24.934026028960083 26.377895110028927 26.60477913887106 32 25.645148498206687 27.717981864190893 24.440636305647427 22.196233331954993 33 23.435622080486553 24.08895589285 25.64728379755193 26.82813822911152 34 22.905152714575554 25.682058672603027 26.823325332174626 24.589463280646797 35 24.378915986477793 24.912774716428856 26.544177309834648 24.164131987258703 36 22.362210488997107 27.37555441522285 28.683781147408187 21.578453948371852 37 21.87373534354255 25.515878153718507 28.60484285891501 24.005543643823934 38 19.147873207958497 24.768930106568384 28.221573573264152 27.861623112208967 39 20.92922126649688 27.360641213446556 26.606033203565882 25.104104316490677 40 19.68400281181641 25.39192911077323 28.09820072220569 26.825867355204675 41 18.5972032323687 28.11836743824409 28.35087781139274 24.933551517994474 42 21.3155070861434 26.364913845755467 29.405715687942607 22.913863380158528 43 22.22416169164515 24.428841318787992 28.893820036971185 24.453176952595676 44 22.684301753724743 23.374240697720925 29.619042260624468 24.322415287929864 45 21.193557767981762 22.239820553510263 28.62023057165692 27.94639110685106 46 24.491239510765634 26.176194056004498 26.200190753408176 23.132375679821692 47 18.389841940397357 25.92955003480877 32.43682394897516 23.24378407581872 48 20.036632246545054 26.101051855236197 28.75597460146163 25.106341296757122 49 20.342556244801564 23.067774401218003 32.82697364362735 23.762695710353082 50 20.98368834662077 23.02520398887475 29.740889897864903 26.250217766639572 51 19.30974923451213 22.64468008809635 28.871382447025933 29.174188230365584 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 411.0 1 1233.5 2 2056.0 3 4650.0 4 7244.0 5 5382.5 6 3521.0 7 3378.5 8 3236.0 9 3346.0 10 3456.0 11 3392.5 12 3329.0 13 3635.5 14 3942.0 15 3873.0 16 3804.0 17 4353.0 18 4902.0 19 6010.5 20 7119.0 21 8576.0 22 10033.0 23 13671.5 24 17310.0 25 19561.5 26 27608.5 27 33404.0 28 39845.5 29 46287.0 30 54272.0 31 62257.0 32 71193.5 33 80130.0 34 86361.0 35 92592.0 36 97725.5 37 102859.0 38 112128.5 39 121398.0 40 132632.5 41 143867.0 42 153601.0 43 163335.0 44 182873.0 45 202411.0 46 300862.5 47 399314.0 48 342422.0 49 285530.0 50 269733.5 51 253937.0 52 222547.5 53 191158.0 54 172387.0 55 153616.0 56 145055.5 57 136495.0 58 125694.0 59 114893.0 60 104110.0 61 93327.0 62 78982.0 63 64637.0 64 55199.5 65 45762.0 66 36966.5 67 28171.0 68 22185.0 69 16199.0 70 13401.0 71 10603.0 72 8818.5 73 7034.0 74 5632.0 75 3415.5 76 2601.0 77 1950.5 78 1300.0 79 969.0 80 638.0 81 426.0 82 214.0 83 121.0 84 28.0 85 15.0 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2950406.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.57586755480649 #Duplication Level Percentage of deduplicated Percentage of total 1 70.69401163898186 15.959786436796028 2 12.26309810982498 5.537001574780131 3 4.804182646221328 3.2537577339057737 4 2.35354852920104 2.1253359951620916 5 1.3386858124711638 1.5110996799923755 6 0.8718362537440757 1.180947587640295 7 0.5897449402109466 0.9319802562923721 8 0.4328002809446358 0.7816673456231309 9 0.34829591135181537 0.7076774128103286 >10 4.414437686801612 25.752467316190447 >50 1.7312785010851526 26.27211759077853 >100 0.14707776896547398 5.678003662419417 >500 0.005177374209877914 0.8199392568237808 >1k 0.00372123771334975 1.6782675086102217 >5k 0.0014561364965281632 2.6164419478261345 >10k+ 6.471717762347392E-4 5.1935086943489885 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGC 46933 1.5907302249249764 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCG 42231 1.4313623277609928 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTC 37277 1.2634532332160389 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGTCCAATT 15745 0.5336553681086603 No Hit GCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 9724 0.3295817592561837 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTC 9458 0.3205660509096036 No Hit GAACTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCT 9148 0.31005902238539373 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCT 8923 0.3024329532952414 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGTCCAATTCGTA 8636 0.2927054785002471 No Hit CTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGCT 7737 0.2622350957800384 No Hit CCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 7329 0.2484064904965622 No Hit TCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTCTGC 5610 0.1901433226477983 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCG 5067 0.17173907591023066 No Hit GAATATGTCTCTTATACACATCTGACGCGGTCCAATTCGTATGCCGTCTTC 4350 0.1474373357429452 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCGGTCCAATTCGT 3149 0.10673107362173205 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2959 0.10029128194560341 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.0504276360609356E-4 0.0 0.0 0.27575865829990853 0.0 2 3.0504276360609356E-4 0.0 0.0 1.0991029709131557 0.0 3 3.0504276360609356E-4 0.0 0.0 1.482135001081207 0.0 4 3.0504276360609356E-4 0.0 0.0 2.212407377154195 0.0 5 3.0504276360609356E-4 0.0 0.0 4.227418192614847 0.0 6 3.0504276360609356E-4 0.0 0.0 4.831063928150905 0.0 7 3.0504276360609356E-4 0.0 0.0 5.6568485828730015 0.0 8 3.0504276360609356E-4 0.0 0.0 6.750901401366456 0.0 9 3.0504276360609356E-4 0.0 0.0 7.1090893931208115 0.0 10 3.0504276360609356E-4 0.0 0.0 9.445988111466693 0.0 11 3.0504276360609356E-4 0.0 0.0 10.653516838021615 0.0 12 3.0504276360609356E-4 0.0 0.0 13.66042503980808 0.0 13 3.0504276360609356E-4 0.0 0.0 14.122327571188508 0.0 14 3.0504276360609356E-4 0.0 0.0 14.35568528534717 0.0 15 3.0504276360609356E-4 0.0 0.0 14.91235443528789 0.0 16 3.389364040067706E-4 0.0 0.0 15.479937337437628 0.0 17 3.389364040067706E-4 0.0 0.0 16.146693031399746 0.0 18 3.389364040067706E-4 0.0 0.0 16.799213396393583 0.0 19 3.389364040067706E-4 0.0 0.0 17.992947411305426 0.0 20 3.7283004440744766E-4 0.0 0.0 18.581951094188394 0.0 21 4.067236848081247E-4 0.0 0.0 19.267992269538496 0.0 22 4.067236848081247E-4 0.0 0.0 20.066662011940053 0.0 23 4.067236848081247E-4 0.0 0.0 20.75378778378298 0.0 24 4.4061732520880176E-4 0.0 0.0 21.285917938073606 0.0 25 7.795537292155724E-4 0.0 0.0 21.755378751263386 0.0 26 7.795537292155724E-4 0.0 0.0 22.19250503151092 0.0 27 7.795537292155724E-4 0.0 0.0 22.660406737242266 0.0 28 7.795537292155724E-4 0.0 0.0 23.106989343161587 0.0 29 8.134473696162494E-4 0.0 0.0 23.578856604819812 0.0 30 8.134473696162494E-4 0.0 0.0 24.10993605625802 0.0 31 8.134473696162494E-4 0.0 0.0 24.605833908960324 0.0 32 8.134473696162494E-4 0.0 0.0 25.06112718046262 0.0 33 8.134473696162494E-4 0.0 0.0 25.502862995804644 0.0 34 8.134473696162494E-4 0.0 0.0 25.944869960269873 0.0 35 8.473410100169265E-4 0.0 0.0 26.41561873179488 0.0 36 8.473410100169265E-4 0.0 0.0 26.87935151975694 0.0 37 8.473410100169265E-4 0.0 0.0 27.344948457941044 0.0 38 8.473410100169265E-4 0.0 0.0 27.808003373095094 0.0 39 8.473410100169265E-4 0.0 0.0 28.28346336063579 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACCG 20 7.035087E-4 45.0 45 CGATCGA 380 0.0 43.81579 41 TAATACG 1800 0.0 43.5 4 AATACGG 1845 0.0 42.439026 5 CGTATGG 350 0.0 42.428574 2 TACGGGA 1470 0.0 42.39796 4 CCGATCG 395 0.0 42.151897 40 TACGGCT 6105 0.0 42.08845 7 CGCATGG 290 0.0 41.896553 2 ACGGGAT 995 0.0 41.83417 5 CGATGAA 9795 0.0 41.761105 19 TATGGGA 4790 0.0 41.7119 4 CGCGATC 65 0.0 41.53846 43 TGAATGA 10750 0.0 41.086044 22 CCGATGA 9730 0.0 41.06886 18 ATGAATG 10840 0.0 41.056274 21 ACGGCTG 6280 0.0 40.915604 8 GATGAAT 10995 0.0 40.804913 20 TTATGGG 5905 0.0 40.73243 3 CTACGGG 790 0.0 40.158226 3 >>END_MODULE