##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935334.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 757943 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.245007869984946 33.0 31.0 34.0 30.0 34.0 2 32.374476708670706 34.0 31.0 34.0 30.0 34.0 3 32.44421282339173 34.0 31.0 34.0 30.0 34.0 4 35.92497193060692 37.0 35.0 37.0 35.0 37.0 5 31.59353143969929 37.0 35.0 37.0 0.0 37.0 6 33.29433479826319 37.0 35.0 37.0 17.0 37.0 7 35.06125262717645 37.0 35.0 37.0 32.0 37.0 8 35.6294022109842 37.0 35.0 37.0 35.0 37.0 9 37.64875722844594 39.0 37.0 39.0 35.0 39.0 10 37.412214374959596 39.0 37.0 39.0 35.0 39.0 11 37.38540101300494 39.0 37.0 39.0 35.0 39.0 12 37.12232582133485 39.0 37.0 39.0 34.0 39.0 13 36.984994913865556 39.0 37.0 39.0 33.0 39.0 14 38.13653137505063 40.0 37.0 41.0 33.0 41.0 15 38.26013037919738 40.0 37.0 41.0 34.0 41.0 16 38.35482087703165 40.0 37.0 41.0 34.0 41.0 17 38.339293324168175 40.0 37.0 41.0 34.0 41.0 18 38.33173998572452 40.0 37.0 41.0 34.0 41.0 19 38.35913782434827 40.0 37.0 41.0 34.0 41.0 20 38.2441450082658 40.0 37.0 41.0 34.0 41.0 21 38.182532195692815 40.0 37.0 41.0 34.0 41.0 22 38.133157770439205 40.0 37.0 41.0 34.0 41.0 23 38.107626826819434 40.0 37.0 41.0 34.0 41.0 24 38.112292085288736 40.0 37.0 41.0 34.0 41.0 25 37.9747329284656 40.0 36.0 41.0 34.0 41.0 26 37.93915505519544 40.0 36.0 41.0 34.0 41.0 27 37.82765194744196 40.0 36.0 41.0 33.0 41.0 28 37.721176922275156 40.0 36.0 41.0 33.0 41.0 29 37.61911647709656 40.0 36.0 41.0 33.0 41.0 30 37.579662322892354 40.0 36.0 41.0 33.0 41.0 31 37.44379194741557 40.0 35.0 41.0 33.0 41.0 32 37.52727447842384 40.0 35.0 41.0 33.0 41.0 33 37.49784482474276 40.0 35.0 41.0 33.0 41.0 34 37.47835127443621 40.0 35.0 41.0 33.0 41.0 35 37.3969612490649 40.0 35.0 41.0 33.0 41.0 36 37.36265655860665 39.0 35.0 41.0 33.0 41.0 37 37.30678428325085 39.0 35.0 41.0 33.0 41.0 38 37.29827704721859 39.0 35.0 41.0 33.0 41.0 39 37.30601773484286 39.0 35.0 41.0 33.0 41.0 40 37.216133667043565 39.0 35.0 41.0 32.0 41.0 41 37.10872717341542 39.0 35.0 41.0 32.0 41.0 42 37.09296609375639 39.0 35.0 41.0 32.0 41.0 43 36.98427586243292 39.0 35.0 41.0 32.0 41.0 44 36.92794708836944 39.0 35.0 41.0 32.0 41.0 45 36.90730569449154 39.0 35.0 41.0 32.0 41.0 46 36.80925742437096 39.0 35.0 41.0 31.0 41.0 47 36.77538680349314 39.0 35.0 41.0 31.0 41.0 48 36.73838270160157 39.0 35.0 41.0 31.0 41.0 49 36.66710293518114 39.0 35.0 40.0 31.0 41.0 50 36.49390785322907 38.0 35.0 40.0 31.0 41.0 51 35.83632806160885 37.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 13.0 10 34.0 11 41.0 12 29.0 13 25.0 14 27.0 15 24.0 16 52.0 17 70.0 18 122.0 19 246.0 20 433.0 21 734.0 22 1042.0 23 1568.0 24 2143.0 25 2945.0 26 4048.0 27 5077.0 28 6390.0 29 8047.0 30 10486.0 31 13950.0 32 18997.0 33 28640.0 34 47062.0 35 72553.0 36 61932.0 37 96357.0 38 155063.0 39 219561.0 40 228.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.754820613159563 4.36721494888138 56.152111702331176 15.725852735627877 2 17.542084299215112 6.819378238205248 54.89225443074215 20.746283031837486 3 19.096290882032026 6.585719506611974 53.06454443144142 21.253445179914586 4 17.746585165375233 3.814270993992952 53.958938864795904 24.480204975835914 5 17.559235984764026 16.714977247629438 44.172187090585965 21.553599677020568 6 19.185083838758324 7.9703882745800145 52.77600030609162 20.06852758057004 7 80.86307281682132 2.4158808775857814 11.545723095272335 5.175323210320565 8 83.11891527463146 4.153874367861436 7.095916183670805 5.631294173836291 9 77.48894046122203 5.685915695507446 9.176679512839355 7.64846433043118 10 38.56767593341452 28.729073294429792 16.47247880117634 16.230771970979347 11 30.243039384228105 27.669099127506954 23.54477843320672 18.54308305505823 12 28.29896179528012 20.697862504172477 30.408223309668404 20.594952390878998 13 24.054579302137498 25.585960949570087 30.46020611048588 19.899253637806538 14 18.387926268861907 30.730015317774555 28.86496741839426 22.01709099496928 15 15.069207051189865 24.72639763148416 39.52408030683046 20.680315010495512 16 17.067378417638267 24.453817767299125 34.36722814248565 24.11157567257696 17 18.96145224640903 22.50459467268647 28.548848660123515 29.985104420780985 18 21.08878899864502 23.425904058748483 30.307292237015183 25.178014705591316 19 23.825274459952794 24.059856743844854 28.672340796075694 23.442528000126657 20 26.32321955608799 25.238177541055194 27.42119130330381 21.017411599553 21 24.515563835275213 26.453704302302416 27.718707079556115 21.312024782866256 22 21.5179769454959 25.06613294139533 28.14829083453505 25.267599278573723 23 20.155473432698763 26.861518610238498 26.748317485615676 26.23469047144706 24 22.123959189543278 23.851265860361533 29.087147714274032 24.937627235821164 25 20.80011293725254 26.064888784512817 26.4110889605155 26.72390931771914 26 19.821147500537638 27.64469095961042 26.73815841032901 25.796003129522934 27 21.11227361424276 28.745829171850655 26.39367340288122 23.74822381102537 28 19.897802341337016 26.310157887862278 30.493717865327604 23.298321905473102 29 20.406415785883635 24.83352969814353 29.543382549875126 25.216671966097714 30 21.692000585796027 28.042346192259842 26.31609500978306 23.949558212161072 31 21.647406203368856 28.11095293445549 25.096742103298002 25.14489875887765 32 23.298321905473102 27.766072118879652 26.116871585330298 22.81873439031695 33 22.40247617564909 27.33846740454097 25.55667114809425 24.70238527171568 34 21.387096391153424 25.072729743529525 28.619566379002116 24.920607486314932 35 20.794967431587864 25.909204254145763 27.359445235327723 25.93638307893865 36 24.241928482748705 26.670343284389457 26.120565794525447 22.96716243833639 37 20.405624169627533 28.065830807857584 28.197502978456164 23.331042044058723 38 19.92709214281285 26.999259838800544 25.284355155994582 27.789292862392028 39 22.613441907900725 25.065473261181907 27.68717436535465 24.633910465562714 40 23.931351038270687 23.229583227234766 29.34574235793457 23.493323376559978 41 20.01469767515499 25.071674255188054 28.97552982216341 25.938098247493546 42 23.520238329267503 23.64610531398799 28.386039583451527 24.447616773292978 43 24.120415387436786 24.255517895145147 26.097345051013072 25.526721666404995 44 20.8776913303507 24.320958172316388 27.599832705097878 27.201517792235038 45 20.0664166038871 24.74882675874043 25.57474638594195 29.61001025143052 46 22.471082917844747 25.620924000881335 27.596666240073464 24.311326841200458 47 19.25078798801493 24.70238527171568 31.321088788998647 24.725737951270744 48 20.072617597893245 23.656924069488074 29.169475804908814 27.100982527709867 49 21.75915603152216 21.837657976919107 31.308159056815615 25.095026934743114 50 20.635720628068338 23.12812441041081 30.050148889824168 26.18600607169668 51 20.122093613899725 23.277212138643673 26.570995444248446 30.029698803208156 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 100.0 1 260.5 2 421.0 3 739.0 4 1057.0 5 789.5 6 522.0 7 629.0 8 736.0 9 921.0 10 1106.0 11 1122.5 12 1139.0 13 1408.0 14 1677.0 15 1480.0 16 1283.0 17 1394.0 18 1505.0 19 1299.0 20 1093.0 21 1382.0 22 1671.0 23 2118.5 24 2566.0 25 3802.5 26 5969.0 27 6899.0 28 7623.0 29 8347.0 30 9197.0 31 10047.0 32 11428.5 33 12810.0 34 14785.0 35 16760.0 36 17681.5 37 18603.0 38 21309.5 39 24016.0 40 30156.0 41 36296.0 42 42985.5 43 49675.0 44 57476.0 45 65277.0 46 76208.5 47 87140.0 48 89477.0 49 91814.0 50 85241.0 51 78668.0 52 66255.0 53 53842.0 54 46783.0 55 39724.0 56 36878.0 57 34032.0 58 33355.0 59 32678.0 60 28944.5 61 25211.0 62 21180.5 63 17150.0 64 14322.5 65 11495.0 66 8852.5 67 6210.0 68 5362.0 69 4514.0 70 3523.5 71 2533.0 72 2241.0 73 1949.0 74 1599.5 75 859.0 76 468.0 77 355.0 78 242.0 79 245.0 80 248.0 81 186.0 82 124.0 83 63.5 84 3.0 85 3.0 86 3.0 87 1.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 757943.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.404773876852015 #Duplication Level Percentage of deduplicated Percentage of total 1 68.8123095371143 18.169734732714502 2 12.317411024893374 6.504769057211073 3 5.347170111073771 4.235724529918937 4 2.942972856613135 3.108341312183322 5 1.9405217808981836 2.5619519413861354 6 1.2281761525471584 1.9457828153369896 7 0.9567268009262735 1.7683508388267586 8 0.7056955490936349 1.4906985119774678 9 0.5576978695709882 1.3253297523861647 >10 3.6608728764593494 20.030865532903263 >50 1.199132529817838 22.73115843559412 >100 0.31980203946208696 12.088564636234674 >500 0.007507090128218003 1.256998227093851 >1k 0.004003781401716268 2.781729676232713 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 3589 0.4735184571926913 TruSeq Adapter, Index 27 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 3217 0.42443824931426244 TruSeq Adapter, Index 27 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGC 3210 0.4235146970154748 TruSeq Adapter, Index 27 (95% over 21bp) CTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTGCT 2964 0.39105843051522343 TruSeq Adapter, Index 20 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGC 2351 0.310181636349963 No Hit GAATCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTC 2225 0.29355769497178547 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCG 2151 0.28379442781317327 No Hit TCCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTG 1343 0.17719010532454288 No Hit TTCCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCT 883 0.11649952568992655 No Hit GAATGCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTT 804 0.10607657831789462 No Hit GCCTGTCTCTTATACACATCTGACGCGACCATTGTCGTATGCCGTCTTCTG 773 0.10198656099469222 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.405043651039722 0.0 2 1.3193604268394853E-4 0.0 0.0 1.8178147960994429 0.0 3 1.3193604268394853E-4 0.0 0.0 2.5412201181355325 0.0 4 1.3193604268394853E-4 0.0 0.0 3.3952421224287312 0.0 5 2.6387208536789706E-4 0.0 0.0 5.036658429459735 0.0 6 2.6387208536789706E-4 0.0 0.0 6.039108481772376 0.0 7 2.6387208536789706E-4 0.0 0.0 6.935481955767123 0.0 8 2.6387208536789706E-4 0.0 0.0 8.308012607808239 0.0 9 2.6387208536789706E-4 0.0 0.0 8.997642302917237 0.0 10 2.6387208536789706E-4 0.0 0.0 10.523614572599786 0.0 11 2.6387208536789706E-4 0.0 0.0 12.486954823779625 0.0 12 2.6387208536789706E-4 0.0 0.0 14.599118931106956 0.0 13 3.958081280518456E-4 0.0 0.0 15.38479806528987 0.0 14 3.958081280518456E-4 0.0 0.0 15.71490204408511 0.0 15 3.958081280518456E-4 0.0 0.0 16.1169111661431 0.0 16 3.958081280518456E-4 0.0 0.0 16.93517850286895 0.0 17 3.958081280518456E-4 0.0 0.0 18.126956776433055 0.0 18 5.277441707357941E-4 0.0 0.0 19.57350354841987 0.0 19 5.277441707357941E-4 0.0 0.0 20.497319719292875 0.0 20 5.277441707357941E-4 0.0 0.0 21.37126406603135 0.0 21 5.277441707357941E-4 0.0 0.0 22.534939962503778 0.0 22 5.277441707357941E-4 0.0 0.0 23.649667587140456 0.0 23 5.277441707357941E-4 0.0 0.0 24.67151223772764 0.0 24 6.596802134197427E-4 0.0 0.0 25.433574820270128 0.0 25 7.916162561036912E-4 0.0 0.0 26.125315492062068 0.0 26 7.916162561036912E-4 0.0 0.0 26.77127435704268 0.0 27 7.916162561036912E-4 0.0 0.0 27.412087716358617 0.0 28 7.916162561036912E-4 0.0 0.0 28.01727834414989 0.0 29 7.916162561036912E-4 0.0 0.0 28.685402464301404 0.0 30 7.916162561036912E-4 0.0 0.0 29.40867585029481 0.0 31 9.235522987876397E-4 0.0 0.0 30.14408735221514 0.0 32 9.235522987876397E-4 0.0 0.0 30.79466397868969 0.0 33 0.0010554883414715882 0.0 0.0 31.445108669121556 0.0 34 0.0010554883414715882 0.0 0.0 32.10689985922424 0.0 35 0.0010554883414715882 0.0 0.0 32.77568365958918 0.0 36 0.0010554883414715882 0.0 0.0 33.35593837531318 0.0 37 0.0010554883414715882 0.0 0.0 34.02775670465985 0.0 38 0.0010554883414715882 0.0 0.0 34.647064489018305 0.0 39 0.0010554883414715882 0.0 0.0 35.351075212779854 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGGC 25 3.889543E-5 45.000004 12 CGACGTC 25 3.889543E-5 45.000004 42 TTAGCTA 25 3.889543E-5 45.000004 35 CTATCCG 25 3.889543E-5 45.000004 1 CGCATTG 25 3.889543E-5 45.000004 27 TAAACGG 25 3.889543E-5 45.000004 2 CGTTATG 25 3.889543E-5 45.000004 42 TACGCTT 25 3.889543E-5 45.000004 18 CTAGTAT 25 3.889543E-5 45.000004 19 TACGACA 25 3.889543E-5 45.000004 32 AACGCCA 65 0.0 45.000004 33 AGTTCGC 25 3.889543E-5 45.000004 31 TCCCGTA 25 3.889543E-5 45.000004 27 GCAGCTA 55 1.8189894E-12 45.000004 9 CCGCCTA 25 3.889543E-5 45.000004 31 TTCGATG 65 0.0 45.000004 1 TGTCGCG 45 3.8380676E-10 45.000004 1 CTAGGCA 45 3.8380676E-10 45.000004 4 ATCGCGC 25 3.889543E-5 45.000004 23 GTCGGTT 25 3.889543E-5 45.000004 12 >>END_MODULE