SRR2935332.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935332.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1197999
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	7050	0.588481292555336	No Hit
CTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGCT	5750	0.4799670116586074	No Hit
TCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	3945	0.329299106259688	No Hit
GCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTGC	3463	0.28906534980413173	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG	1487	0.1241236428411042	No Hit
TCCTGTCTCTTATACACATCTGACGCGTGGACAATCGTATGCCGTCTTCTG	1486	0.1240401703173375	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGACCG	45	3.8562575E-10	45.000004	13
TACGGGT	85	0.0	45.000004	4
CTTCGCA	25	3.890905E-5	45.0	27
GTTTCGC	20	7.0334063E-4	45.0	37
ACGTTGA	20	7.0334063E-4	45.0	10
ATAGCGA	25	3.890905E-5	45.0	25
TTATCGT	20	7.0334063E-4	45.0	13
ACGATTA	20	7.0334063E-4	45.0	40
CCCGTAC	20	7.0334063E-4	45.0	23
TCTCGAG	25	3.890905E-5	45.0	1
AATTCGG	20	7.0334063E-4	45.0	41
CGGTACG	20	7.0334063E-4	45.0	23
TATCGTT	25	3.890905E-5	45.0	22
TATCGCA	35	1.2119926E-7	45.0	12
TACGTCA	20	7.0334063E-4	45.0	31
AGTCGAC	25	3.890905E-5	45.0	23
GGCGTAT	30	2.1655796E-6	44.999996	8
ACGGGTC	30	2.1655796E-6	44.999996	5
ACGTAAG	30	2.1655796E-6	44.999996	22
CGCCGTT	30	2.1655796E-6	44.999996	26