SRR2935331.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935331.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1024991
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGC	7897	0.770445789280101	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCG	7749	0.7560066381070663	No Hit
GAATCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTC	5639	0.5501511720590717	No Hit
CTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGCT	5236	0.5108337536622273	No Hit
CCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC	4481	0.4371745703133003	No Hit
GCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC	4069	0.39697909542620374	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCTTTCGT	3574	0.3486859884623377	No Hit
TCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC	3529	0.3442957060110772	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTA	1676	0.16351363085139287	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCT	1625	0.1585379774066309	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTC	1603	0.15639161709712573	No Hit
GAACTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCT	1403	0.13687925064707884	No Hit
TCCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTG	1177	0.11483027655852587	No Hit
GAATAATACCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCG	1083	0.10565946432700385	No Hit
GAATAATACGGCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGC	1027	0.10019600172099072	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCGCATA	20	7.032928E-4	45.000004	34
GGTACCG	20	7.032928E-4	45.000004	24
GGTCGTC	35	1.2117562E-7	45.000004	7
ACTTCGA	20	7.032928E-4	45.000004	36
TCGATTG	35	1.2117562E-7	45.000004	1
ACGGGTA	70	0.0	45.000004	5
AACGGCA	20	7.032928E-4	45.000004	5
GTCGTCA	35	1.2117562E-7	45.000004	8
TTAACGA	20	7.032928E-4	45.000004	32
CGCCGTT	20	7.032928E-4	45.000004	26
GTGCGAC	20	7.032928E-4	45.000004	14
TAGTCCG	20	7.032928E-4	45.000004	26
TCCGGAC	25	3.89051E-5	45.0	14
CGTATAG	25	3.89051E-5	45.0	32
CTATCGT	85	0.0	45.0	45
ACGTTAG	25	3.89051E-5	45.0	38
GCGCGTA	25	3.89051E-5	45.0	22
GCGAAAC	25	3.89051E-5	45.0	27
CGTTGCG	25	3.89051E-5	45.0	13
CGTTATC	25	3.89051E-5	45.0	26