##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935331.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1024991 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31205542292567 33.0 31.0 34.0 30.0 34.0 2 32.4656509179105 34.0 31.0 34.0 30.0 34.0 3 32.54257452016652 34.0 31.0 34.0 30.0 34.0 4 35.99150626688429 37.0 35.0 37.0 35.0 37.0 5 31.69074167480495 37.0 35.0 37.0 0.0 37.0 6 33.27944733173267 37.0 35.0 37.0 17.0 37.0 7 35.13033285170309 37.0 35.0 37.0 32.0 37.0 8 35.63346897680077 37.0 35.0 37.0 35.0 37.0 9 37.69927735950852 39.0 37.0 39.0 35.0 39.0 10 37.5094191070946 39.0 37.0 39.0 35.0 39.0 11 37.45710840387867 39.0 37.0 39.0 35.0 39.0 12 37.205192045588696 39.0 37.0 39.0 34.0 39.0 13 37.074045528204636 39.0 37.0 39.0 33.0 39.0 14 38.2790756211518 40.0 37.0 41.0 34.0 41.0 15 38.3371385699972 40.0 37.0 41.0 34.0 41.0 16 38.476114424419336 40.0 38.0 41.0 34.0 41.0 17 38.42016954295208 40.0 37.0 41.0 34.0 41.0 18 38.4342262517427 40.0 37.0 41.0 34.0 41.0 19 38.439333613661 40.0 37.0 41.0 34.0 41.0 20 38.25613200506151 40.0 37.0 41.0 34.0 41.0 21 38.27374386701932 40.0 37.0 41.0 34.0 41.0 22 38.24900218636066 40.0 37.0 41.0 34.0 41.0 23 38.119492756521765 40.0 37.0 41.0 34.0 41.0 24 38.13649583264633 40.0 37.0 41.0 34.0 41.0 25 38.07784751280743 40.0 36.0 41.0 34.0 41.0 26 37.985873046690166 40.0 36.0 41.0 34.0 41.0 27 37.87207107184356 40.0 36.0 41.0 33.0 41.0 28 37.850083561709326 40.0 36.0 41.0 33.0 41.0 29 37.843655212582355 40.0 36.0 41.0 33.0 41.0 30 37.832232673262496 40.0 36.0 41.0 33.0 41.0 31 37.65891310265163 40.0 36.0 41.0 33.0 41.0 32 37.562729819091096 40.0 36.0 41.0 33.0 41.0 33 37.53368956410349 40.0 36.0 41.0 33.0 41.0 34 37.44893760042771 40.0 35.0 41.0 33.0 41.0 35 37.3929293037695 40.0 35.0 41.0 33.0 41.0 36 37.35598166227801 40.0 35.0 41.0 33.0 41.0 37 37.29320647693492 40.0 35.0 41.0 33.0 41.0 38 37.3457230356169 40.0 35.0 41.0 33.0 41.0 39 37.300546053575104 40.0 35.0 41.0 33.0 41.0 40 37.259260813021776 39.0 35.0 41.0 33.0 41.0 41 37.17580056800499 39.0 35.0 41.0 32.0 41.0 42 37.10589946643434 39.0 35.0 41.0 32.0 41.0 43 37.03411932397455 39.0 35.0 41.0 32.0 41.0 44 37.00757177380094 39.0 35.0 41.0 32.0 41.0 45 36.99298335302456 39.0 35.0 41.0 32.0 41.0 46 36.90436208708174 39.0 35.0 41.0 32.0 41.0 47 36.79992312127619 39.0 35.0 41.0 32.0 41.0 48 36.81726766381363 39.0 35.0 41.0 32.0 41.0 49 36.76911114341492 39.0 35.0 41.0 32.0 41.0 50 36.662236058658074 39.0 35.0 41.0 32.0 41.0 51 36.10182918679286 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 10.0 11 10.0 12 12.0 13 16.0 14 26.0 15 30.0 16 56.0 17 70.0 18 142.0 19 278.0 20 638.0 21 1412.0 22 2335.0 23 3232.0 24 4236.0 25 5146.0 26 5613.0 27 6274.0 28 7594.0 29 9387.0 30 12475.0 31 16915.0 32 23745.0 33 36105.0 34 61194.0 35 90116.0 36 82642.0 37 128632.0 38 206672.0 39 319568.0 40 406.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.49644533464196 4.5567229370794475 51.69899052772171 15.247841200556882 2 18.413820218909237 10.041649146187625 50.24180700123221 21.30272363367093 3 20.740572356245078 9.887696574896756 48.72403757691531 20.647693491942857 4 19.456756205664245 4.729797627491363 51.72464928960352 24.088796877240874 5 19.53783008826419 17.311566638146093 40.55177069847443 22.598832575115292 6 19.860759753012466 11.304099255505658 51.10269260900827 17.732448382473603 7 78.96586409051397 2.7598291106946307 12.761380343827408 5.512926454963995 8 79.90060400530346 7.547676028374884 7.118989337467354 5.432730628854302 9 74.73568060597606 5.833904883067266 9.228666398046421 10.20174811291026 10 39.42629740163572 28.250882202868123 16.16989807715385 16.15292231834231 11 32.00154928189613 22.769273096056452 25.203050563370798 20.026127058676614 12 27.2218975581249 20.317251566111313 29.288452288849363 23.172398586914422 13 23.901380597488174 24.139138782681993 31.687009934721377 20.272470685108456 14 19.59148909600182 29.00513272799469 29.051474598313547 22.35190357768995 15 16.17458104510186 23.02751926602282 38.17672545417472 22.621174234700597 16 19.773051665819505 22.960591849099163 31.216469217778496 26.049887267302836 17 20.65774236066463 24.250164147782762 28.983376439402882 26.10871705214973 18 20.212762843771312 22.303025099732583 30.76787991309192 26.716332143404188 19 21.634238739657228 24.55309363691974 28.540153035490068 25.272514587932964 20 26.196230015678186 24.83621807410992 29.25674469336804 19.710807216843858 21 25.631834816110583 27.289703031538814 26.889504395648352 20.18895775670225 22 22.73112641964661 24.068796701629573 28.508055192679745 24.69202168604407 23 22.653272077510923 25.980520804572922 26.75711298928478 24.609094128631373 24 22.72907762116936 24.878267223809768 28.105710196479773 24.2869449585411 25 20.42886230220558 28.47020120176665 26.725990764796958 24.37494573123081 26 19.960370383739956 27.391264898911306 28.146978851521627 24.501385865827114 27 22.98400668883922 26.43925653981352 26.472915371939855 24.10382139940741 28 18.423576402134263 26.453988376483306 30.606902889879034 24.515532331503398 29 19.611879518942118 24.253481250079272 31.640570502570263 24.494068728408347 30 21.63531191981198 25.955057166355605 29.847384025810957 22.562246888021456 31 22.61805225606859 25.104805798294816 26.780918076353842 25.49622386928275 32 24.653387200472977 26.925114464419686 25.803250955374242 22.618247379733088 33 24.959536230074214 23.821087209546228 26.33076778235126 24.888608778028296 34 20.60837607354601 25.071049404336232 28.721422919811 25.59915160230675 35 22.57668603919449 24.64509444473171 27.99985560848827 24.77836390758553 36 24.291042555495608 27.035749582191453 25.522175316661315 23.15103254565162 37 21.857850459174763 25.549980438852632 29.623967429957922 22.968201672014683 38 20.45032590530063 25.25007536651541 27.855561658590172 26.444037069593783 39 22.227121994241898 25.289100099415506 30.4893408820175 21.99443702432509 40 21.551018496747776 22.726541013530852 30.442511202537386 25.279929287183982 41 20.143786628370393 24.598167203419347 27.730682513309873 27.527363654900384 42 22.277268776018524 23.356985573531865 27.386191683634298 26.979553966815317 43 23.496303869985198 24.210651605721417 26.535647630076753 25.757396894216633 44 22.188487508670807 22.98976283694198 30.080751928553518 24.74099772583369 45 21.22096681824523 23.221179503039536 27.365898822526248 28.191954856188982 46 22.455806929036452 25.098561841030797 29.53255199313945 22.913079236793298 47 19.322511124487924 24.44821466725074 32.47501685380652 23.75425735445482 48 20.619302998758037 23.128788447898565 30.331583399268876 25.920325154074526 49 21.318235964998717 21.046526262181814 33.35512214253589 24.280115630283582 50 21.81102077969465 22.213365775894616 29.295671864435885 26.679941579974848 51 19.813832511700102 22.587710526238766 28.721813167140002 28.876643794921126 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 411.0 1 644.5 2 878.0 3 1287.0 4 1696.0 5 1335.5 6 975.0 7 1102.5 8 1230.0 9 1361.0 10 1492.0 11 1623.0 12 1754.0 13 1804.0 14 1854.0 15 1857.5 16 1861.0 17 1894.5 18 1928.0 19 2235.0 20 2542.0 21 2854.5 22 3167.0 23 3803.5 24 4440.0 25 5252.0 26 7367.5 27 8671.0 28 9737.0 29 10803.0 30 13057.5 31 15312.0 32 17653.5 33 19995.0 34 23861.0 35 27727.0 36 29367.5 37 31008.0 38 33648.5 39 36289.0 40 41012.5 41 45736.0 42 52923.0 43 60110.0 44 66664.0 45 73218.0 46 92912.5 47 112607.0 48 112575.5 49 112544.0 50 106564.0 51 100584.0 52 86345.0 53 72106.0 54 64056.0 55 56006.0 56 52280.5 57 48555.0 58 45671.0 59 42787.0 60 37939.5 61 33092.0 62 30166.5 63 27241.0 64 24247.0 65 21253.0 66 17714.0 67 14175.0 68 11720.0 69 9265.0 70 7575.0 71 5885.0 72 5095.5 73 4306.0 74 3670.0 75 2364.0 76 1694.0 77 1088.5 78 483.0 79 329.5 80 176.0 81 103.5 82 31.0 83 17.0 84 3.0 85 1.5 86 0.0 87 0.0 88 0.0 89 1.5 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1024991.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.930919821133283 #Duplication Level Percentage of deduplicated Percentage of total 1 68.14580203394384 15.626459225871875 2 12.483404754231644 5.7251190702807975 3 5.220582449853577 3.591382727316239 4 2.8522678479233 2.6162050131650227 5 1.8059926979403138 2.070653687701076 6 1.2066425347853136 1.660165393075863 7 0.9029356853778385 1.449360206352747 8 0.6799553546696975 1.2473601375904861 9 0.5554834575842115 1.14639719650465 >10 4.114589379270284 20.188333695691764 >50 1.7047408317964827 28.274541750317645 >100 0.31339679904060097 10.078145373502565 >500 0.007748821954300574 1.2155807168886268 >1k 0.004735391194294796 2.4922662302490792 >5k 0.0017219604342890162 2.618029575491577 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGC 7897 0.770445789280101 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCG 7749 0.7560066381070663 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTC 5639 0.5501511720590717 No Hit CTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGCT 5236 0.5108337536622273 No Hit CCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC 4481 0.4371745703133003 No Hit GCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC 4069 0.39697909542620374 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCTTTCGT 3574 0.3486859884623377 No Hit TCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTGC 3529 0.3442957060110772 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTA 1676 0.16351363085139287 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCT 1625 0.1585379774066309 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTC 1603 0.15639161709712573 No Hit GAACTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCT 1403 0.13687925064707884 No Hit TCCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCGTCTTCTG 1177 0.11483027655852587 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGCCG 1083 0.10565946432700385 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCAGCTTTCGTCGTATGC 1027 0.10019600172099072 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.75618322502344E-5 0.0 0.0 0.5267363323190155 0.0 2 9.75618322502344E-5 0.0 0.0 1.7664545347227438 0.0 3 9.75618322502344E-5 0.0 0.0 2.2654833066826927 0.0 4 9.75618322502344E-5 0.0 0.0 2.969782173697135 0.0 5 9.75618322502344E-5 0.0 0.0 4.4697953445444885 0.0 6 9.75618322502344E-5 0.0 0.0 5.11545955037654 0.0 7 9.75618322502344E-5 0.0 0.0 5.864051489232589 0.0 8 9.75618322502344E-5 0.0 0.0 6.878304297306025 0.0 9 9.75618322502344E-5 0.0 0.0 7.266307704165207 0.0 10 9.75618322502344E-5 0.0 0.0 8.930029629528454 0.0 11 9.75618322502344E-5 0.0 0.0 10.447116121019599 0.0 12 9.75618322502344E-5 0.0 0.0 12.713477484192545 0.0 13 9.75618322502344E-5 0.0 0.0 13.244701660795071 0.0 14 9.75618322502344E-5 0.0 0.0 13.453288858146072 0.0 15 2.926854967507032E-4 0.0 0.0 13.905487950625908 0.0 16 3.902473290009376E-4 0.0 0.0 14.572518197720761 0.0 17 3.902473290009376E-4 0.0 0.0 15.444428292541104 0.0 18 0.001268303819253047 0.0 0.0 16.37536329587284 0.0 19 0.001268303819253047 0.0 0.0 17.495860939266784 0.0 20 0.0013658656515032814 0.0 0.0 18.26084326594087 0.0 21 0.0013658656515032814 0.0 0.0 19.141338801999236 0.0 22 0.0015609893160037503 0.0 0.0 20.014224515142086 0.0 23 0.0015609893160037503 0.0 0.0 20.796767971621215 0.0 24 0.0015609893160037503 0.0 0.0 21.449944438536534 0.0 25 0.0015609893160037503 0.0 0.0 22.01121765947213 0.0 26 0.0015609893160037503 0.0 0.0 22.536002755146143 0.0 27 0.0015609893160037503 0.0 0.0 23.065373256935914 0.0 28 0.0015609893160037503 0.0 0.0 23.568304502185875 0.0 29 0.0015609893160037503 0.0 0.0 24.12499231700571 0.0 30 0.0015609893160037503 0.0 0.0 24.768607724360507 0.0 31 0.0015609893160037503 0.0 0.0 25.334466351411866 0.0 32 0.0015609893160037503 0.0 0.0 25.853983108144366 0.0 33 0.0015609893160037503 0.0 0.0 26.35613385873632 0.0 34 0.0016585511482539847 0.0 0.0 26.876528671959072 0.0 35 0.0016585511482539847 0.0 0.0 27.424045674547386 0.0 36 0.0016585511482539847 0.0 0.0 27.972343171793703 0.0 37 0.0016585511482539847 0.0 0.0 28.480640317817425 0.0 38 0.0016585511482539847 0.0 0.0 29.013035236406953 0.0 39 0.0016585511482539847 0.0 0.0 29.54474722217073 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCATA 20 7.032928E-4 45.000004 34 GGTACCG 20 7.032928E-4 45.000004 24 GGTCGTC 35 1.2117562E-7 45.000004 7 ACTTCGA 20 7.032928E-4 45.000004 36 TCGATTG 35 1.2117562E-7 45.000004 1 ACGGGTA 70 0.0 45.000004 5 AACGGCA 20 7.032928E-4 45.000004 5 GTCGTCA 35 1.2117562E-7 45.000004 8 TTAACGA 20 7.032928E-4 45.000004 32 CGCCGTT 20 7.032928E-4 45.000004 26 GTGCGAC 20 7.032928E-4 45.000004 14 TAGTCCG 20 7.032928E-4 45.000004 26 TCCGGAC 25 3.89051E-5 45.0 14 CGTATAG 25 3.89051E-5 45.0 32 CTATCGT 85 0.0 45.0 45 ACGTTAG 25 3.89051E-5 45.0 38 GCGCGTA 25 3.89051E-5 45.0 22 GCGAAAC 25 3.89051E-5 45.0 27 CGTTGCG 25 3.89051E-5 45.0 13 CGTTATC 25 3.89051E-5 45.0 26 >>END_MODULE