##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935330.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 604359 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32136528123185 33.0 31.0 34.0 30.0 34.0 2 32.46641813888765 34.0 31.0 34.0 31.0 34.0 3 32.53446544189794 34.0 31.0 34.0 31.0 34.0 4 35.98636902900429 37.0 35.0 37.0 35.0 37.0 5 31.51036718241972 37.0 35.0 37.0 0.0 37.0 6 33.31606379651829 37.0 35.0 37.0 17.0 37.0 7 35.203162358796675 37.0 35.0 37.0 32.0 37.0 8 35.7702789236199 37.0 35.0 37.0 35.0 37.0 9 37.82687111468515 39.0 38.0 39.0 35.0 39.0 10 37.55700833445022 39.0 37.0 39.0 35.0 39.0 11 37.474747625169805 39.0 37.0 39.0 35.0 39.0 12 37.21382985940476 39.0 37.0 39.0 34.0 39.0 13 37.06169511829889 39.0 37.0 39.0 33.0 39.0 14 38.1937226052727 40.0 37.0 41.0 33.0 41.0 15 38.32305467445674 40.0 37.0 41.0 34.0 41.0 16 38.408273890187786 40.0 37.0 41.0 34.0 41.0 17 38.420910419138295 40.0 37.0 41.0 34.0 41.0 18 38.38880532928276 40.0 37.0 41.0 34.0 41.0 19 38.406425650978974 40.0 37.0 41.0 34.0 41.0 20 38.30244440804224 40.0 37.0 41.0 34.0 41.0 21 38.254582127510304 40.0 37.0 41.0 34.0 41.0 22 38.21659146302115 40.0 37.0 41.0 34.0 41.0 23 38.15070016331353 40.0 37.0 41.0 34.0 41.0 24 38.14287699860513 40.0 37.0 41.0 34.0 41.0 25 38.04327229345472 40.0 36.0 41.0 34.0 41.0 26 37.95132197915478 40.0 36.0 41.0 34.0 41.0 27 37.90111175642292 40.0 36.0 41.0 34.0 41.0 28 37.84836330723957 40.0 36.0 41.0 34.0 41.0 29 37.81803696147489 40.0 36.0 41.0 34.0 41.0 30 37.795350114749674 40.0 36.0 41.0 34.0 41.0 31 37.5752607307908 39.0 36.0 41.0 33.0 41.0 32 37.57777082826598 39.0 35.0 41.0 33.0 41.0 33 37.58835063265377 39.0 35.0 41.0 33.0 41.0 34 37.56611054025836 39.0 35.0 41.0 33.0 41.0 35 37.478444103587435 39.0 35.0 41.0 33.0 41.0 36 37.464685724875444 39.0 35.0 41.0 33.0 41.0 37 37.404084327361716 39.0 35.0 41.0 33.0 41.0 38 37.407415129087184 39.0 35.0 41.0 33.0 41.0 39 37.409950046247346 39.0 35.0 41.0 33.0 41.0 40 37.31343952849217 39.0 35.0 41.0 33.0 41.0 41 37.27269553361496 39.0 35.0 41.0 33.0 41.0 42 37.26432799048248 39.0 35.0 41.0 33.0 41.0 43 37.2317447080295 39.0 35.0 41.0 33.0 41.0 44 37.18309812545193 39.0 35.0 41.0 33.0 41.0 45 37.16089939919816 39.0 35.0 41.0 33.0 41.0 46 37.02466745758729 39.0 35.0 41.0 33.0 41.0 47 36.948391601680456 39.0 35.0 40.0 33.0 41.0 48 36.94024909035854 39.0 35.0 40.0 33.0 41.0 49 36.968881078961346 39.0 35.0 40.0 33.0 41.0 50 36.87418074356467 39.0 35.0 40.0 32.0 41.0 51 36.207303936898434 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 5.0 11 3.0 12 8.0 13 7.0 14 8.0 15 16.0 16 14.0 17 28.0 18 61.0 19 108.0 20 188.0 21 345.0 22 569.0 23 875.0 24 1159.0 25 1731.0 26 2384.0 27 3101.0 28 3962.0 29 5331.0 30 7048.0 31 9983.0 32 14011.0 33 22375.0 34 37868.0 35 60898.0 36 53716.0 37 82329.0 38 129771.0 39 166283.0 40 169.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.26481445630825 4.3300422431038506 57.43424024462281 14.97090305596508 2 18.018594907993428 5.20948641453176 55.89177955486723 20.880139122607588 3 19.699880369118354 5.229342162522607 53.03586113551714 22.034916332841902 4 18.533520639222715 4.888816084479589 51.81092694904849 24.766736327249202 5 14.78310077288499 17.124424390138973 45.24976049003986 22.842714346936173 6 19.454000023165037 7.549155386119839 53.53771516598578 19.45912942472934 7 81.26179969190498 2.0267754761656565 11.066104748998526 5.645320082930841 8 83.75353060018962 2.7894016635807524 7.257441355220987 6.199626381008639 9 78.10225379286153 4.713423643893779 10.30347856158343 6.880844001661264 10 40.21186083106233 25.762336624423565 16.458925903312434 17.56687664120167 11 29.44938356175717 24.186783021349893 24.432001509036848 21.931831907856093 12 25.168318830364072 21.24631220847212 30.920363558745713 22.6650054024181 13 22.010262112419937 24.948581885932036 33.00124594818642 20.0399100534616 14 18.26745361614537 28.303375973552143 32.92182295622304 20.507347454079447 15 14.559392678854788 24.919625586778718 39.11152146323625 21.40946027113024 16 17.277313649668493 23.38295615685379 34.534937015912725 24.804793177564992 17 18.111089600717452 23.647864927965003 28.57539972102674 29.665645750290803 18 20.55169195792567 22.701242142501393 32.941182310514115 23.805883589058823 19 22.00380899432291 23.696842439675756 29.47569242784504 24.823656138156295 20 25.22325306647208 24.53690604425515 29.19853927880614 21.041301610466626 21 23.312633716052876 27.15058433811691 27.6190145261343 21.91776741969591 22 22.261933718203917 24.2607456826158 27.630762510362217 25.84655808881807 23 20.019723376337577 26.421051064019895 27.53264202237412 26.02658353726841 24 21.445035152947174 22.888878961014893 31.16756762123175 24.498518264806183 25 20.02187441570325 26.26882366275674 28.090588540916904 25.618713380623102 26 17.837576672143545 29.50448326243177 28.242650477613473 24.415289587811216 27 20.246575297132996 28.969370854078452 28.672196492482115 22.111857356306434 28 16.009027746753173 28.34805140653155 31.683486139860577 23.9594347068547 29 17.280457476433707 26.18410580466246 31.21902710144136 25.316409617462472 30 20.268582084489516 26.86217959854987 29.38220494772147 23.487033369239143 31 22.499540835827712 28.50772471329127 24.445238674364077 24.547495776516936 32 22.390665151011234 29.688148931347097 23.3225615900483 24.59862432759337 33 21.453142916710103 27.38405484157595 24.694593776215793 26.468208465498154 34 18.713711552239644 28.347224083698595 25.5310171603302 27.408047203731556 35 19.17701233869273 27.109218196469314 26.97436457469815 26.739404890139802 36 22.484318095701397 26.728649693311425 26.94027887398053 23.846753337006646 37 18.3857607812575 27.37081767624872 29.55958296310637 24.68383857938742 38 19.072604197174194 29.393622002816205 24.563380374909617 26.97039342509998 39 21.682476806004377 25.797580577107315 25.506362939908232 27.013579676980072 40 22.488785638999335 25.037601822757665 26.612824496698156 25.86078804154484 41 17.884899538188396 27.01738536201165 25.349998924480317 29.74771617531964 42 19.727182022605767 27.13403788145787 25.908441836722872 27.230338259213482 43 20.94433937444466 24.271500879444172 27.09548463744231 27.688675108668853 44 20.12380058872293 24.625595051947602 27.756184651837735 27.49441970749174 45 20.34783961188631 25.498917034411665 25.50884490840709 28.644398445294932 46 23.079494141727018 26.053223332489463 27.109218196469314 23.758064329314198 47 17.95869673488771 26.936638653515544 29.852786175104534 25.25187843649222 48 18.239490104391596 25.94451311223958 29.1631298615558 26.65286692181303 49 21.293800539083556 21.724504805918336 30.64635423647203 26.335340418526076 50 20.391687722032763 23.145845432929764 27.790270352555353 28.672196492482115 51 19.522005960033688 24.92574777574256 25.069701948676197 30.48254431554755 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 231.0 1 298.5 2 366.0 3 621.0 4 876.0 5 712.5 6 549.0 7 646.5 8 744.0 9 972.0 10 1200.0 11 1315.5 12 1431.0 13 1472.5 14 1514.0 15 1599.0 16 1684.0 17 1587.0 18 1490.0 19 1613.5 20 1737.0 21 1991.5 22 2246.0 23 2496.0 24 2746.0 25 3139.5 26 3196.5 27 2860.0 28 4129.5 29 5399.0 30 7594.5 31 9790.0 32 10158.0 33 10526.0 34 11841.5 35 13157.0 36 14567.0 37 15977.0 38 17439.5 39 18902.0 40 24502.0 41 30102.0 42 34597.0 43 39092.0 44 45009.5 45 50927.0 46 60774.0 47 70621.0 48 76368.0 49 82115.0 50 74205.5 51 66296.0 52 53909.5 53 41523.0 54 35666.5 55 29810.0 56 26461.0 57 23112.0 58 20763.5 59 18415.0 60 17536.5 61 16658.0 62 13820.5 63 10983.0 64 10865.0 65 10747.0 66 8601.5 67 6456.0 68 5027.5 69 3599.0 70 3148.5 71 2698.0 72 2236.5 73 1775.0 74 1557.5 75 948.5 76 557.0 77 446.0 78 335.0 79 246.5 80 158.0 81 111.5 82 65.0 83 40.0 84 15.0 85 8.0 86 1.0 87 0.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 604359.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.764198392701765 #Duplication Level Percentage of deduplicated Percentage of total 1 66.85897858285995 16.557090099593417 2 12.619299725382113 6.250136839526591 3 5.798664177271368 4.307978102958027 4 3.1754400900118065 3.1454891349276455 5 2.0456666802476167 2.532964775749579 6 1.4361005957771773 2.133832803942193 7 1.0009446138258278 1.735131369782234 8 0.7245922709527645 1.4355157401354055 9 0.6086664524631173 1.3565823105400756 >10 4.1005121354836644 20.5976091024815 >50 1.250648229806155 22.67341421159974 >100 0.36708903585097646 13.082098333620873 >500 0.00803844604053233 1.4059013121496924 >1k 0.005358964027021554 2.786255862993066 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGC 3407 0.5637377783734503 TruSeq Adapter, Index 16 (95% over 21bp) CTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGCT 3072 0.5083071485656704 TruSeq Adapter, Index 13 (95% over 22bp) CCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGC 2627 0.43467541643294794 TruSeq Adapter, Index 16 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTGC 2600 0.4302078731350075 TruSeq Adapter, Index 16 (95% over 21bp) GTTGTAGGGGAATGAATGCACAATATTCTTTTTATATCAAAACCTAAAGCA 1529 0.2529953223167025 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGC 1240 0.20517606257208051 No Hit TCCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTG 1184 0.1959100468430188 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCG 1137 0.1881332122132706 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 905 0.1497454327643007 No Hit GAATCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTC 886 0.1466016059990833 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 854 0.14130673986819092 No Hit TTCCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCT 839 0.1388247713693351 No Hit TGCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTG 770 0.12740771627459838 No Hit GCTAGAGGGGCTGGCAGTTTGCAGCAGAACGGATGTGAAGAAAATAATTCT 750 0.12409842494279062 No Hit GCCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTG 631 0.10440814151853452 No Hit TTCTGTCTCTTATACACATCTGACGCATACGCACTCGTATGCCGTCTTCTG 611 0.10109885018672676 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 609 0.100767921053546 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.5313067233217342 0.0 2 0.0 0.0 0.0 2.0686380115130247 0.0 3 0.0 0.0 0.0 2.923758891652147 0.0 4 0.0 0.0 0.0 3.900661692801795 0.0 5 0.0 0.0 0.0 5.642010791599033 0.0 6 0.0 0.0 0.0 6.803572049063553 0.0 7 0.0 0.0 0.0 7.862710739808624 0.0 8 0.0 0.0 0.0 9.544492594633322 0.0 9 0.0 0.0 0.0 10.341535411899219 0.0 10 0.0 0.0 0.0 11.929002463767397 0.0 11 0.0 0.0 0.0 14.383007450869433 0.0 12 0.0 0.0 0.0 16.693720123304196 0.0 13 0.0 0.0 0.0 17.362527901462542 0.0 14 0.0 0.0 0.0 17.583257633294117 0.0 15 0.0 0.0 0.0 17.961840561652924 0.0 16 0.0 0.0 0.0 18.833673363017677 0.0 17 0.0 0.0 0.0 20.08210351794215 0.0 18 0.0 0.0 0.0 21.571946475522 0.0 19 0.0 0.0 0.0 22.59733039468263 0.0 20 0.0 0.0 0.0 23.541636676213972 0.0 21 0.0 0.0 0.0 24.76690179181579 0.0 22 0.0 0.0 0.0 25.973469411392898 0.0 23 0.0 0.0 0.0 27.065204621756273 0.0 24 0.0 0.0 0.0 27.901958935003865 0.0 25 0.0 0.0 0.0 28.58350748478967 0.0 26 0.0 0.0 0.0 29.24023634958692 0.0 27 3.30929133180775E-4 0.0 0.0 29.823829875951215 0.0 28 3.30929133180775E-4 0.0 0.0 30.502234598971803 0.0 29 3.30929133180775E-4 0.0 0.0 31.184775936157152 0.0 30 3.30929133180775E-4 0.0 0.0 31.93581960391092 0.0 31 3.30929133180775E-4 0.0 0.0 32.726740232212975 0.0 32 3.30929133180775E-4 0.0 0.0 33.43476311265324 0.0 33 3.30929133180775E-4 0.0 0.0 34.114160623073374 0.0 34 3.30929133180775E-4 0.0 0.0 34.75632860601067 0.0 35 3.30929133180775E-4 0.0 0.0 35.410906431442235 0.0 36 3.30929133180775E-4 0.0 0.0 36.04116096558502 0.0 37 3.30929133180775E-4 0.0 0.0 36.70417748391271 0.0 38 3.30929133180775E-4 0.0 0.0 37.36553935657449 0.0 39 3.30929133180775E-4 0.0 0.0 38.001916079681116 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGACAA 20 7.0306275E-4 45.000004 30 CTTAAGC 20 7.0306275E-4 45.000004 44 TATCAGT 20 7.0306275E-4 45.000004 23 CTTCGAA 20 7.0306275E-4 45.000004 42 GTGCACG 20 7.0306275E-4 45.000004 21 AGCGTGA 20 7.0306275E-4 45.000004 25 TAATACG 20 7.0306275E-4 45.000004 4 ACACGTA 20 7.0306275E-4 45.000004 25 ATTAGGT 45 3.8380676E-10 45.000004 16 CTCCGAT 20 7.0306275E-4 45.000004 38 CACGGGT 20 7.0306275E-4 45.000004 4 ACGCAGA 20 7.0306275E-4 45.000004 23 TCCGAAG 20 7.0306275E-4 45.000004 21 CGTTGTT 20 7.0306275E-4 45.000004 43 CACATCG 20 7.0306275E-4 45.000004 11 ATCAGGC 80 0.0 45.000004 15 ATTACGG 20 7.0306275E-4 45.000004 2 ATAGCGG 45 3.8380676E-10 45.000004 2 TGTATCG 20 7.0306275E-4 45.000004 2 CGATTTA 45 3.8380676E-10 45.000004 22 >>END_MODULE