##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935329.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1064528 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.55987630198548 34.0 31.0 34.0 31.0 34.0 2 32.720016758601 34.0 31.0 34.0 31.0 34.0 3 32.750169089023494 34.0 31.0 34.0 31.0 34.0 4 36.15148215922925 37.0 35.0 37.0 35.0 37.0 5 31.82010055160597 37.0 35.0 37.0 0.0 37.0 6 33.584418634361896 37.0 35.0 37.0 17.0 37.0 7 35.36934397216419 37.0 35.0 37.0 32.0 37.0 8 35.902373634136445 37.0 35.0 37.0 35.0 37.0 9 37.96979506410353 39.0 38.0 39.0 35.0 39.0 10 37.76841755219215 39.0 37.0 39.0 35.0 39.0 11 37.68210324200021 39.0 37.0 39.0 35.0 39.0 12 37.503731231118394 39.0 37.0 39.0 35.0 39.0 13 37.43151612733531 39.0 37.0 39.0 35.0 39.0 14 38.68105582943802 40.0 38.0 41.0 35.0 41.0 15 38.758728751146045 40.0 38.0 41.0 35.0 41.0 16 38.8278241624457 40.0 38.0 41.0 35.0 41.0 17 38.805427381900714 40.0 38.0 41.0 35.0 41.0 18 38.79382035982144 40.0 38.0 41.0 35.0 41.0 19 38.80986409000045 40.0 38.0 41.0 35.0 41.0 20 38.74528899192882 40.0 38.0 41.0 35.0 41.0 21 38.689585431289736 40.0 38.0 41.0 35.0 41.0 22 38.66537470127606 40.0 38.0 41.0 35.0 41.0 23 38.623184171764386 40.0 38.0 41.0 35.0 41.0 24 38.6042142620955 40.0 38.0 41.0 35.0 41.0 25 38.51867306449431 40.0 38.0 41.0 35.0 41.0 26 38.50033066297927 40.0 38.0 41.0 35.0 41.0 27 38.441418168427695 40.0 37.0 41.0 35.0 41.0 28 38.42823673966303 40.0 37.0 41.0 35.0 41.0 29 38.384912374310495 40.0 37.0 41.0 35.0 41.0 30 38.347735334345366 40.0 37.0 41.0 34.0 41.0 31 38.16762922158929 40.0 37.0 41.0 34.0 41.0 32 38.20305900831166 40.0 37.0 41.0 34.0 41.0 33 38.20419848045331 40.0 37.0 41.0 34.0 41.0 34 38.16678659462222 40.0 37.0 41.0 34.0 41.0 35 38.120637503193905 40.0 37.0 41.0 34.0 41.0 36 38.09114555934649 40.0 37.0 41.0 34.0 41.0 37 38.082153780830566 40.0 37.0 41.0 34.0 41.0 38 38.070517637863915 40.0 37.0 41.0 34.0 41.0 39 38.036201959929656 40.0 37.0 41.0 34.0 41.0 40 37.94671253362993 40.0 36.0 41.0 34.0 41.0 41 37.89894394510995 40.0 36.0 41.0 34.0 41.0 42 37.900655501781074 40.0 36.0 41.0 34.0 41.0 43 37.84916507597733 40.0 36.0 41.0 34.0 41.0 44 37.7856683901222 40.0 36.0 41.0 34.0 41.0 45 37.744308275592566 40.0 36.0 41.0 34.0 41.0 46 37.64536019719538 40.0 35.0 41.0 34.0 41.0 47 37.59086844122466 39.0 35.0 41.0 33.0 41.0 48 37.577852343949615 39.0 35.0 41.0 33.0 41.0 49 37.56054138547788 39.0 35.0 41.0 34.0 41.0 50 37.494704695414306 39.0 35.0 41.0 33.0 41.0 51 36.88582733380428 39.0 35.0 40.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 7.0 10 13.0 11 8.0 12 13.0 13 11.0 14 12.0 15 24.0 16 35.0 17 49.0 18 87.0 19 150.0 20 269.0 21 423.0 22 748.0 23 1158.0 24 1667.0 25 2491.0 26 3336.0 27 4228.0 28 5012.0 29 6583.0 30 8756.0 31 12535.0 32 17830.0 33 29647.0 34 54231.0 35 85904.0 36 80304.0 37 134813.0 38 229094.0 39 384607.0 40 483.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.191055566410654 5.061961733275217 56.08119279154705 16.665789908767078 2 19.368490072595552 4.911942194099169 53.615029383914745 22.10453834939053 3 19.484503930380413 5.0876069018381855 52.55850480212827 22.869384365653133 4 19.05933897464416 4.420550704161844 51.39432687538515 25.125783445808846 5 16.032081824057233 17.229983617152392 43.803826672478316 22.934107886312056 6 20.865867313964497 6.570611576210301 53.21738836366916 19.34613274615604 7 82.63286639712624 2.538589872694753 9.599183863646612 5.2293598665323975 8 84.54413599266529 2.906170622097305 7.064727278192777 5.484966107044625 9 78.84630559271339 4.719274645664558 9.71144018757609 6.7229795740459615 10 38.72054093457382 26.020640133467605 18.01098702899313 17.247831902965448 11 28.029605609246538 26.788116423428974 24.928700795094162 20.253577172230322 12 26.504516555694167 21.597271278914224 30.252092946357443 21.646119219034162 13 23.18201118242075 23.909469736822327 31.50081538484662 21.4077036959103 14 19.06741767243323 27.320089279004407 30.802571656170624 22.809921392391747 15 16.848969684216854 25.301448153547863 36.68912419400899 21.160457968226293 16 20.123190747448636 23.495483444305833 32.67062961237281 23.710696195872725 17 19.66899884267957 24.373431229615377 29.14136593870711 26.816203988997938 18 21.089816331745148 23.424278177746384 31.13520734071814 24.35069814979033 19 22.97778921738085 25.812378819533166 27.795887003441898 23.413944959644088 20 25.300602708430404 25.53441525258143 28.818218027144425 20.346764011843746 21 24.2048118978552 26.141914538649992 28.47787939819338 21.175394165301427 22 22.459343483684787 24.79173868606556 27.932473359084963 24.816444471164687 23 22.373295958396586 25.456540363428676 27.611298152796355 24.558865525378383 24 23.08675769918687 23.15880841086378 29.26583424766657 24.488599642282775 25 20.919693986442816 25.651086678790975 27.48899042580374 25.94022890896247 26 19.84466355041859 27.0273773916703 28.551151308373292 24.576807749537824 27 20.03000390783521 26.496719672944252 29.077863616551188 24.39541280266935 28 19.7706401334676 24.6981760930666 30.30357116017615 25.227612613289647 29 21.29309891332121 23.03124013647363 30.417236559301397 25.258424390903762 30 21.108322185982896 25.1503013542152 27.843137991673306 25.898238468128596 31 21.618877098582658 26.144920565734296 26.66656020320743 25.56964213247561 32 23.174496114709996 26.113451219695488 27.362549411570196 23.349503254024317 33 22.154137796281546 24.293395758495784 27.633561540889485 25.91890490433319 34 19.36050531315287 24.340740685073573 30.373837043271763 25.924916958501797 35 20.4234177024935 22.318154149068885 31.19579757413614 26.062630574301476 36 20.770144138998692 24.421809478003397 29.565215757593975 25.242830625403933 37 20.272458779853604 25.145792313588743 30.043268002344703 24.538480904212946 38 21.419445989208363 25.630138427547234 27.115209745539808 25.8352058377046 39 22.454270812980027 23.35560924653931 29.584754933641953 24.60536500683871 40 21.669885620669444 22.92753220206514 31.332759683164745 24.06982249410067 41 18.124934243157533 23.235931793245456 32.30708821186479 26.332045751732224 42 20.24878631656471 23.28769182210332 30.781999158312416 25.681522703019553 43 21.984860896096674 22.904047615469015 29.66798430853862 25.44310717989569 44 21.853722964543913 23.031615889859168 27.879867885109643 27.23479326048728 45 21.29939278252897 23.05275201779568 27.567053191649254 28.08080200802609 46 21.432879172741345 23.149508514571714 29.211631821802715 26.205980490884222 47 18.52605098221935 23.126493619707514 33.12810935926533 25.21934603880781 48 19.7839793786542 21.344765003832684 32.18055325928486 26.690702358228247 49 20.426329791231417 20.937354395563105 32.45560473749868 26.180711075706792 50 20.317361309425397 21.07422256624532 31.30842965145116 27.299986472878118 51 18.723039694587648 21.828265672673712 29.188710865284897 30.259983767453747 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 290.0 1 520.5 2 751.0 3 1191.5 4 1632.0 5 1248.5 6 865.0 7 966.5 8 1068.0 9 1352.5 10 1637.0 11 1536.0 12 1435.0 13 1610.0 14 1785.0 15 1817.0 16 1849.0 17 1870.0 18 1891.0 19 2217.0 20 2543.0 21 2926.0 22 3309.0 23 4202.5 24 5096.0 25 6090.5 26 8392.0 27 9699.0 28 10711.0 29 11723.0 30 14327.0 31 16931.0 32 20142.0 33 23353.0 34 26161.5 35 28970.0 36 30224.0 37 31478.0 38 35041.0 39 38604.0 40 42408.0 41 46212.0 42 52912.5 43 59613.0 44 67998.0 45 76383.0 46 89042.5 47 101702.0 48 111648.0 49 121594.0 50 117176.5 51 112759.0 52 96225.5 53 79692.0 54 69945.0 55 60198.0 56 55035.0 57 49872.0 58 47494.0 59 45116.0 60 41812.0 61 38508.0 62 34631.5 63 30755.0 64 24410.0 65 18065.0 66 14956.5 67 11848.0 68 9802.0 69 7756.0 70 6174.0 71 4592.0 72 4015.0 73 3438.0 74 2838.5 75 1712.0 76 1185.0 77 870.5 78 556.0 79 421.5 80 287.0 81 155.0 82 23.0 83 42.0 84 61.0 85 67.5 86 74.0 87 39.0 88 4.0 89 2.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1064528.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.10812916760418 #Duplication Level Percentage of deduplicated Percentage of total 1 66.11658098094011 15.939470744088663 2 12.732948504322424 6.13935134453315 3 5.727988211048235 4.142732389873945 4 3.2340374407381445 3.1186636941673296 5 2.0405323793325807 2.4596709085814275 6 1.3856157368205118 2.0042761895960366 7 1.0426487359235606 1.7595417281459094 8 0.755650311907138 1.4573852259998137 9 0.6226753380457323 1.3510383731179303 >10 4.5414106398918905 24.170535886560824 >50 1.578359958056546 26.5625196637587 >100 0.21055273927940327 7.540276015719001 >500 0.008249267770274966 1.4164593306678839 >1k 0.0023569336486499903 1.4266871576192866 >5k 3.9282227477499846E-4 0.5113913475701393 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGC 5400 0.5072670704763049 TruSeq Adapter, Index 20 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGCT 3937 0.3698352697157801 TruSeq Adapter, Index 23 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGC 3733 0.3506718470533419 TruSeq Adapter, Index 20 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTGC 3282 0.308305652833932 TruSeq Adapter, Index 20 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCGTCTTCTG 1782 0.16739813325718064 TruSeq Adapter, Index 23 (95% over 21bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGC 1210 0.11366539912524612 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCCGCTTTTCGTATGCCG 1121 0.10530488629702554 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3771624607337712 0.0 2 0.0 0.0 0.0 1.610854763801422 0.0 3 0.0 0.0 0.0 2.3077833556280343 0.0 4 0.0 0.0 0.0 3.0482054018306703 0.0 5 0.0 0.0 0.0 4.446007996032044 0.0 6 0.0 0.0 0.0 5.372427968075993 0.0 7 0.0 0.0 0.0 6.160101002510032 0.0 8 0.0 0.0 0.0 7.374442006222476 0.0 9 0.0 0.0 0.0 7.956296123728075 0.0 10 0.0 0.0 0.0 9.161619046187607 0.0 11 0.0 0.0 0.0 11.103418604301625 0.0 12 0.0 0.0 0.0 12.784163497813115 0.0 13 0.0 0.0 0.0 13.34882689793035 0.0 14 0.0 0.0 0.0 13.547412562187185 0.0 15 0.0 0.0 0.0 13.871875610599252 0.0 16 0.0 0.0 0.0 14.679651451159575 0.0 17 0.0 0.0 0.0 15.757218222536185 0.0 18 0.0 0.0 0.0 16.967895630739633 0.0 19 0.0 0.0 0.0 17.766277636661506 0.0 20 0.0 0.0 0.0 18.574147415568213 0.0 21 9.393834638450092E-5 0.0 0.0 19.66373829528204 0.0 22 9.393834638450092E-5 0.0 0.0 20.75257766822479 0.0 23 1.8787669276900185E-4 0.0 0.0 21.788341875460297 0.0 24 1.8787669276900185E-4 0.0 0.0 22.586817819728555 0.0 25 1.8787669276900185E-4 0.0 0.0 23.310143086889212 0.0 26 1.8787669276900185E-4 0.0 0.0 23.94770264380082 0.0 27 1.8787669276900185E-4 0.0 0.0 24.586013707483506 0.0 28 1.8787669276900185E-4 0.0 0.0 25.220473298964425 0.0 29 1.8787669276900185E-4 0.0 0.0 25.908759562923663 0.0 30 1.8787669276900185E-4 0.0 0.0 26.637909007560157 0.0 31 1.8787669276900185E-4 0.0 0.0 27.344137495678837 0.0 32 1.8787669276900185E-4 0.0 0.0 28.02612989043031 0.0 33 1.8787669276900185E-4 0.0 0.0 28.611177911712986 0.0 34 1.8787669276900185E-4 0.0 0.0 29.216610554161093 0.0 35 1.8787669276900185E-4 0.0 0.0 29.832282476365112 0.0 36 2.818150391535028E-4 0.0 0.0 30.50046593419807 0.0 37 3.757533855380037E-4 0.0 0.0 31.158879804007036 0.0 38 3.757533855380037E-4 0.0 0.0 31.79897569627102 0.0 39 3.757533855380037E-4 0.0 0.0 32.409950701155815 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGCGAA 20 7.0330506E-4 45.000004 36 ACCGGTA 20 7.0330506E-4 45.000004 41 TCGCAAT 20 7.0330506E-4 45.000004 17 GTCTACG 40 6.8139343E-9 45.000004 1 CGACACG 20 7.0330506E-4 45.000004 16 TGACGCG 20 7.0330506E-4 45.000004 25 CCGTCCG 20 7.0330506E-4 45.000004 1 TCGGCAC 20 7.0330506E-4 45.000004 20 TTTCACG 65 0.0 45.000004 1 TCGTGCA 20 7.0330506E-4 45.000004 23 CGGATTG 20 7.0330506E-4 45.000004 24 GTCGTAC 20 7.0330506E-4 45.000004 22 AACGACG 40 6.8139343E-9 45.000004 11 TCCGTCG 30 2.1653505E-6 45.000004 1 TTACGCT 20 7.0330506E-4 45.000004 22 CACGTAT 20 7.0330506E-4 45.000004 34 TACAGCG 20 7.0330506E-4 45.000004 30 CCCGGTA 20 7.0330506E-4 45.000004 39 CGATAGT 20 7.0330506E-4 45.000004 11 ATCGCTC 30 2.1653505E-6 45.000004 28 >>END_MODULE