##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935328.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1289657 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.377309625737695 33.0 31.0 34.0 31.0 34.0 2 32.518310682607854 34.0 31.0 34.0 31.0 34.0 3 32.571013843215674 34.0 31.0 34.0 31.0 34.0 4 36.02068612041806 37.0 35.0 37.0 35.0 37.0 5 31.651585654170063 37.0 35.0 37.0 0.0 37.0 6 33.41397751495165 37.0 35.0 37.0 17.0 37.0 7 35.26520927657509 37.0 35.0 37.0 32.0 37.0 8 35.81195387610814 37.0 35.0 37.0 35.0 37.0 9 37.84802935974449 39.0 38.0 39.0 35.0 39.0 10 37.567686601941446 39.0 37.0 39.0 35.0 39.0 11 37.49885512194328 39.0 37.0 39.0 35.0 39.0 12 37.3081137077533 39.0 37.0 39.0 35.0 39.0 13 37.245038021737564 39.0 37.0 39.0 34.0 39.0 14 38.48493048926963 40.0 38.0 41.0 34.0 41.0 15 38.558195706300204 40.0 38.0 41.0 35.0 41.0 16 38.601221875273815 40.0 38.0 41.0 35.0 41.0 17 38.594443328730044 40.0 38.0 41.0 35.0 41.0 18 38.58159960361554 40.0 38.0 41.0 35.0 41.0 19 38.60090085968595 40.0 38.0 41.0 35.0 41.0 20 38.53928990421484 40.0 38.0 41.0 34.0 41.0 21 38.487065165388934 40.0 38.0 41.0 34.0 41.0 22 38.45125176694268 40.0 38.0 41.0 34.0 41.0 23 38.39747932977528 40.0 37.0 41.0 34.0 41.0 24 38.390822521026905 40.0 37.0 41.0 34.0 41.0 25 38.32618362867026 40.0 37.0 41.0 34.0 41.0 26 38.296675782785655 40.0 37.0 41.0 34.0 41.0 27 38.226620721633736 40.0 37.0 41.0 34.0 41.0 28 38.231110287464034 40.0 37.0 41.0 34.0 41.0 29 38.18987529242271 40.0 37.0 41.0 34.0 41.0 30 38.130247034676664 40.0 37.0 41.0 34.0 41.0 31 37.960432890295635 40.0 37.0 41.0 34.0 41.0 32 37.99241116048686 40.0 37.0 41.0 34.0 41.0 33 37.982338714867595 40.0 37.0 41.0 34.0 41.0 34 37.90271211647748 40.0 37.0 41.0 34.0 41.0 35 37.841236856001245 40.0 36.0 41.0 33.0 41.0 36 37.81525475378337 40.0 36.0 41.0 33.0 41.0 37 37.77552325928522 40.0 36.0 41.0 33.0 41.0 38 37.80804430945592 40.0 36.0 41.0 33.0 41.0 39 37.80339268503176 40.0 36.0 41.0 33.0 41.0 40 37.708609343414565 40.0 36.0 41.0 33.0 41.0 41 37.695110405324826 40.0 36.0 41.0 33.0 41.0 42 37.67671559182015 40.0 36.0 41.0 33.0 41.0 43 37.58271617957333 40.0 36.0 41.0 33.0 41.0 44 37.527650375254815 39.0 35.0 41.0 33.0 41.0 45 37.546257648351464 39.0 35.0 41.0 33.0 41.0 46 37.49723608680448 39.0 35.0 41.0 33.0 41.0 47 37.48310674853857 39.0 35.0 41.0 33.0 41.0 48 37.44262389146882 39.0 35.0 41.0 33.0 41.0 49 37.41393254175335 39.0 35.0 41.0 33.0 41.0 50 37.34277020944329 39.0 35.0 41.0 33.0 41.0 51 36.7108704097291 39.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 11.0 11 6.0 12 12.0 13 17.0 14 14.0 15 35.0 16 40.0 17 74.0 18 121.0 19 219.0 20 346.0 21 603.0 22 970.0 23 1510.0 24 2266.0 25 3470.0 26 4751.0 27 6291.0 28 8306.0 29 10603.0 30 14238.0 31 19463.0 32 27129.0 33 41191.0 34 69132.0 35 103496.0 36 102221.0 37 164168.0 38 275747.0 39 432657.0 40 546.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.68144630704133 5.155556865119951 55.31447508911285 14.848521738725879 2 19.568924140294666 4.69116982267378 52.99463345680285 22.745272580228697 3 20.247321574651245 4.961009012473859 52.43409681799114 22.357572594883756 4 19.044366060122965 5.010324450609736 51.359935238594446 24.585374250672853 5 15.932220737762057 17.76565396845828 44.25820198703996 22.0439233067397 6 21.11809574173598 7.231147506662625 53.76685428761291 17.883902463988488 7 83.13427523752439 2.626977560700248 9.111569975582654 5.127177226192701 8 84.79045203492092 3.0285572055205376 6.929904618049605 5.251086141508944 9 79.09800823009529 5.687868944998554 9.5717698581871 5.642352966719058 10 36.869570746330226 25.889441921379095 20.344556730975754 16.896430601314925 11 28.315048109691183 25.747000946763364 24.650585388207872 21.28736555533758 12 23.397228875584748 24.157508546846177 31.15355478239563 21.291707795173444 13 22.276233137958386 25.526864895084504 32.617277307066914 19.57962465989019 14 20.831507912569 26.408417121761836 31.43882443161244 21.32125053405673 15 18.51988551994833 25.62611609133281 35.01628727638434 20.83771111233452 16 20.001907483927898 25.529811414973132 31.310650816457397 23.157630284641577 17 19.98795028445548 25.301145963616683 29.22482489530162 25.48607885662622 18 21.86216955360999 24.380591118413655 31.857075175802557 21.900164152173794 19 22.373933534265312 25.932321539758245 30.21935289770846 21.47439202826798 20 24.276532442347072 26.508753877969106 29.01019418341466 20.204519496269164 21 23.523851690798406 27.717369812283422 28.419959725725523 20.338818771192653 22 22.52816058843553 25.35883572143601 28.34373790860671 23.769265781521753 23 21.16632561991289 25.530741894937957 28.171909275101832 25.13102321004732 24 22.029733487276072 24.908483418459326 29.93516880845062 23.12661428581398 25 20.006559883752036 26.784331027552287 28.873878868567378 24.3352302201283 26 19.446643564916872 27.187616552308096 29.768457814752296 23.597282068022736 27 19.82294517069267 27.96573042289539 28.851469809414443 23.359854596997494 28 17.657097972561697 26.373756743071997 31.32825239579206 24.640892888574246 29 19.253801592206297 24.945469997061235 32.0910133469597 23.70971506377277 30 20.378364169697836 27.71031367255014 29.745118275634532 22.166203882117493 31 22.256693058697003 28.80075865133132 26.201617949578843 22.740930340392833 32 22.444262311606884 27.66409983429703 27.563220298110274 22.328417555985816 33 22.748451720108527 27.95285878338194 26.395080242265966 22.90360925424357 34 21.464079208657804 26.148968291569 28.55480178062849 23.832150719144703 35 20.60501358113049 26.555277876210496 29.523276344020154 23.31643219863886 36 23.23935744155229 27.375263345215046 27.369990625414353 22.01538858781831 37 21.19928011866721 27.703102452822726 28.492382082987955 22.605235345522104 38 20.58865264174893 28.045208919891103 28.162216775468206 23.203921662891762 39 22.34733731527065 26.39787168216045 28.95638142544878 22.29840957712012 40 24.20155126518136 25.517947795421573 28.150508235910788 22.129992703486277 41 22.76791425937284 25.300680723634265 27.071073936713407 24.860331080279487 42 23.037055589199298 24.70974840597151 27.941925643795212 24.31127036103398 43 22.59779150580348 24.645080048415974 28.481681563392435 24.275446882388106 44 20.159468757972082 25.469872997238802 28.90993496720446 25.460723277584663 45 20.443730387226992 25.586803312818834 27.911917664929515 26.057548635024663 46 22.26049251855338 25.70226036845456 29.348191030638375 22.68905608235368 47 20.320829491872644 26.012187736739307 30.3352751933266 23.331707578061454 48 20.98317614683594 24.668186967542532 30.02565798503013 24.322978900591398 49 21.28596983539034 23.694051984364837 31.57576006643627 23.444218113808553 50 22.049428646531595 23.10048330680173 29.383781889293044 25.466306157373626 51 20.99930446622629 23.642798046302232 27.877334826236744 27.480562661234732 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 275.0 1 493.5 2 712.0 3 1248.5 4 1785.0 5 1406.5 6 1028.0 7 1115.0 8 1202.0 9 1445.5 10 1689.0 11 1704.0 12 1719.0 13 1785.0 14 1851.0 15 1884.5 16 1918.0 17 1971.5 18 2025.0 19 2318.5 20 2612.0 21 3174.5 22 3737.0 23 4381.0 24 5025.0 25 6884.0 26 10880.0 27 13017.0 28 14626.5 29 16236.0 30 18856.5 31 21477.0 32 25681.0 33 29885.0 34 34266.0 35 38647.0 36 42105.5 37 45564.0 38 50206.0 39 54848.0 40 62566.5 41 70285.0 42 78363.0 43 86441.0 44 96828.5 45 107216.0 46 121512.0 47 135808.0 48 145742.5 49 155677.0 50 146219.0 51 136761.0 52 113916.5 53 91072.0 54 79976.5 55 68881.0 56 58904.0 57 48927.0 58 44220.0 59 39513.0 60 34708.5 61 29904.0 62 26206.5 63 22509.0 64 19075.5 65 15642.0 66 12936.5 67 10231.0 68 8739.0 69 7247.0 70 5712.0 71 4177.0 72 3208.0 73 2239.0 74 1853.5 75 1203.0 76 938.0 77 697.5 78 457.0 79 312.5 80 168.0 81 116.0 82 64.0 83 47.0 84 30.0 85 16.5 86 3.0 87 3.0 88 3.0 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1289657.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.6284278018286 #Duplication Level Percentage of deduplicated Percentage of total 1 67.58947922466511 17.322120884725237 2 12.573266922207821 6.4446612709784565 3 5.466111306702087 4.202635169417202 4 3.071597690088952 3.148808785468328 5 1.8938262293048798 2.4267894393474707 6 1.357919432307968 2.0880804078962907 7 0.968657841650682 1.737762429159374 8 0.7260605000946688 1.488623128514863 9 0.5699525497585692 1.3146288994760054 >10 4.1706451143387735 22.909314252389123 >50 1.365174726336921 24.710546905138138 >100 0.2373679275113421 8.96949201455299 >500 0.006928251689215273 1.150744484572837 >1k 0.002711055008823368 1.690604687217265 >5k 3.0122833431370753E-4 0.3951872411464076 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGC 5119 0.3969272449961502 No Hit CCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGC 4840 0.37529358581390243 No Hit GCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGC 4705 0.36482568620958905 No Hit CTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTGCT 4524 0.3507909467401022 Illumina Single End Adapter 2 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCTACTAGGGTCGTATGCCGTCTTCTG 2029 0.15732865405297689 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3627321062887264 0.0 2 0.0 0.0 0.0 1.577396160374425 0.0 3 0.0 0.0 0.0 2.236098435475479 0.0 4 0.0 0.0 0.0 2.9878487070593187 0.0 5 0.0 0.0 0.0 4.261288078923311 0.0 6 0.0 0.0 0.0 5.111669226778903 0.0 7 0.0 0.0 0.0 5.884432837568439 0.0 8 0.0 0.0 0.0 7.085217232178788 0.0 9 0.0 0.0 0.0 7.670178970067235 0.0 10 0.0 0.0 0.0 8.824051666450847 0.0 11 0.0 0.0 0.0 10.755883153427616 0.0 12 0.0 0.0 0.0 12.407407550999995 0.0 13 0.0 0.0 0.0 12.90668759212721 0.0 14 0.0 0.0 0.0 13.097668604908126 0.0 15 0.0 0.0 0.0 13.400229673471319 0.0 16 0.0 0.0 0.0 14.176482584128959 0.0 17 0.0 0.0 0.0 15.31507990108998 0.0 18 0.0 0.0 0.0 16.55029205439896 0.0 19 0.0 0.0 0.0 17.354691983992645 0.0 20 0.0 0.0 0.0 18.139939534310287 0.0 21 0.0 0.0 0.0 19.25294865223854 0.0 22 7.753999706898811E-5 0.0 0.0 20.357195750498 0.0 23 1.5507999413797623E-4 0.0 0.0 21.474236948273845 0.0 24 1.5507999413797623E-4 0.0 0.0 22.296936317175806 0.0 25 1.5507999413797623E-4 0.0 0.0 23.077066227686895 0.0 26 1.5507999413797623E-4 0.0 0.0 23.738404862688295 0.0 27 1.5507999413797623E-4 0.0 0.0 24.406877177420043 0.0 28 1.5507999413797623E-4 0.0 0.0 25.076279972116616 0.0 29 1.5507999413797623E-4 0.0 0.0 25.777629245605613 0.0 30 1.5507999413797623E-4 0.0 0.0 26.543336716661873 0.0 31 1.5507999413797623E-4 0.0 0.0 27.289504108456743 0.0 32 1.5507999413797623E-4 0.0 0.0 27.962473743018492 0.0 33 1.5507999413797623E-4 0.0 0.0 28.64777223711421 0.0 34 1.5507999413797623E-4 0.0 0.0 29.30748253217716 0.0 35 1.5507999413797623E-4 0.0 0.0 30.018912005285127 0.0 36 1.5507999413797623E-4 0.0 0.0 30.700333499527392 0.0 37 1.5507999413797623E-4 0.0 0.0 31.36647961434707 0.0 38 1.5507999413797623E-4 0.0 0.0 32.08046790735831 0.0 39 1.5507999413797623E-4 0.0 0.0 32.73777446251213 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAGACG 20 7.0336065E-4 45.000004 45 ATCTCCG 20 7.0336065E-4 45.000004 1 GCGACGC 20 7.0336065E-4 45.000004 33 CGAAAGA 20 7.0336065E-4 45.000004 42 CTATCGA 60 0.0 45.000004 42 CGGCACG 35 1.2120836E-7 45.000004 10 CAACCGA 20 7.0336065E-4 45.000004 25 CGCGACA 20 7.0336065E-4 45.000004 18 CTAACCG 20 7.0336065E-4 45.000004 26 CGGATAG 30 2.1657088E-6 45.000004 33 CGCTAGA 20 7.0336065E-4 45.000004 12 GTGTCGT 30 2.1657088E-6 45.000004 15 CTACCCG 20 7.0336065E-4 45.000004 29 CGTCGTT 20 7.0336065E-4 45.000004 30 CGTAACG 20 7.0336065E-4 45.000004 16 TCAAGCG 30 2.1657088E-6 45.000004 17 TATCGCC 30 2.1657088E-6 45.000004 25 TCGAATA 20 7.0336065E-4 45.000004 13 CCGTTCA 20 7.0336065E-4 45.000004 27 TCGAAAC 30 2.1657088E-6 45.000004 34 >>END_MODULE