##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935327.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1186207 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.43329789825891 33.0 31.0 34.0 31.0 34.0 2 32.58394951302766 34.0 31.0 34.0 31.0 34.0 3 32.644192792657606 34.0 31.0 34.0 31.0 34.0 4 36.04286014161104 37.0 35.0 37.0 35.0 37.0 5 32.127981035350494 37.0 35.0 37.0 0.0 37.0 6 33.63976692095056 37.0 35.0 37.0 17.0 37.0 7 35.29352802672721 37.0 35.0 37.0 32.0 37.0 8 35.8209014109679 37.0 35.0 37.0 35.0 37.0 9 37.852100855921435 39.0 38.0 39.0 35.0 39.0 10 37.64718468193157 39.0 37.0 39.0 35.0 39.0 11 37.586266983755785 39.0 37.0 39.0 35.0 39.0 12 37.3682342120726 39.0 37.0 39.0 35.0 39.0 13 37.288627532968526 39.0 37.0 39.0 34.0 39.0 14 38.536172860217484 40.0 38.0 41.0 35.0 41.0 15 38.601277854539724 40.0 38.0 41.0 35.0 41.0 16 38.6418786940222 40.0 38.0 41.0 35.0 41.0 17 38.63077692173457 40.0 38.0 41.0 35.0 41.0 18 38.59616829103184 40.0 38.0 41.0 35.0 41.0 19 38.60805576092537 40.0 38.0 41.0 35.0 41.0 20 38.52531050651362 40.0 38.0 41.0 34.0 41.0 21 38.46942059859704 40.0 38.0 41.0 34.0 41.0 22 38.4414592056867 40.0 37.0 41.0 34.0 41.0 23 38.4001257790588 40.0 37.0 41.0 34.0 41.0 24 38.37981650757414 40.0 37.0 41.0 34.0 41.0 25 38.30554363614445 40.0 37.0 41.0 34.0 41.0 26 38.27693227236056 40.0 37.0 41.0 34.0 41.0 27 38.17332893837248 40.0 37.0 41.0 34.0 41.0 28 38.13329039535258 40.0 37.0 41.0 34.0 41.0 29 38.09023888747917 40.0 37.0 41.0 34.0 41.0 30 38.036036711973544 40.0 36.0 41.0 34.0 41.0 31 37.840226874398816 40.0 36.0 41.0 34.0 41.0 32 37.846069868075304 40.0 36.0 41.0 34.0 41.0 33 37.83605138057691 40.0 36.0 41.0 34.0 41.0 34 37.73948560411463 40.0 36.0 41.0 33.0 41.0 35 37.66502305246892 40.0 36.0 41.0 33.0 41.0 36 37.657882646114885 40.0 36.0 41.0 33.0 41.0 37 37.61882116696327 40.0 35.0 41.0 33.0 41.0 38 37.605530063471214 40.0 35.0 41.0 33.0 41.0 39 37.57082785719525 39.0 35.0 41.0 33.0 41.0 40 37.41959455643071 39.0 35.0 41.0 33.0 41.0 41 37.35459241093671 39.0 35.0 41.0 33.0 41.0 42 37.37135086877754 39.0 35.0 41.0 33.0 41.0 43 37.3271435761212 39.0 35.0 41.0 33.0 41.0 44 37.27110192403181 39.0 35.0 41.0 33.0 41.0 45 37.23071268336808 39.0 35.0 41.0 33.0 41.0 46 37.12301394276041 39.0 35.0 41.0 33.0 41.0 47 37.058306855380216 39.0 35.0 41.0 33.0 41.0 48 37.03310046222961 39.0 35.0 41.0 33.0 41.0 49 36.99125026239096 39.0 35.0 41.0 33.0 41.0 50 36.893249660472414 39.0 35.0 41.0 33.0 41.0 51 36.19399143657051 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 13.0 10 11.0 11 16.0 12 15.0 13 15.0 14 31.0 15 32.0 16 54.0 17 77.0 18 142.0 19 234.0 20 384.0 21 600.0 22 1009.0 23 1523.0 24 2355.0 25 3406.0 26 4769.0 27 6319.0 28 7845.0 29 10080.0 30 13268.0 31 17868.0 32 24667.0 33 38370.0 34 68132.0 35 101055.0 36 98382.0 37 158714.0 38 254500.0 39 371892.0 40 425.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.958977648926368 4.4299182183210855 55.24996901889805 17.361135113854495 2 18.793262895936376 5.616304742764122 54.193070855255456 21.397361506044057 3 21.652628925642826 4.504441467635918 51.23043448571792 22.61249512100333 4 20.5441377432438 4.905298990816949 49.44212940911662 25.108433856822625 5 16.253824163910682 17.035138049261217 43.297670642645 23.4133671441831 6 21.43782661879419 7.729763860776408 51.87172222048934 18.96068729994006 7 81.94800738825518 3.73164211642656 8.885042829792775 5.435307665525494 8 83.94892291143114 3.4339706307583753 7.152124376268223 5.464982081542261 9 78.07996412093337 5.62726404413395 9.742144499231586 6.550627335701105 10 40.19441800630075 27.559945270935003 17.075940371284272 15.169696351479969 11 30.586651402326915 25.304773955979016 23.080288684858544 21.02828595683553 12 26.976910438060138 21.105506880333703 29.909450879989745 22.00813180161641 13 24.028183951030467 22.82856196262541 31.305075758278278 21.838178328065844 14 21.007210377278167 24.746776911618294 30.030846218240153 24.21516649286339 15 19.433791909843727 23.264067738598744 34.337598749628015 22.96454160192951 16 21.826881817423097 23.91968686746917 31.150296702009005 23.103134613098725 17 21.43462313070147 23.643681077585953 28.64955273405063 26.272143057661946 18 23.732451418681563 22.546486405829675 29.802218331201892 23.918843844286876 19 25.924564599601922 24.532143209406115 27.47075341824825 22.072538772743712 20 26.734709877786926 24.769201328267325 28.227366724357555 20.26872206958819 21 26.121157605712998 24.83276527621233 28.16540452045891 20.880672597615764 22 24.538634487909782 23.232032857671552 27.840334781366156 24.388997873052514 23 23.716771187490885 25.118297228055475 26.91663428052608 24.24829730392756 24 24.344233342072673 22.641495118474264 28.50615449074234 24.508117048710723 25 23.70690781625804 23.695105491705917 27.737485953126225 24.86050073890982 26 22.32089340224767 25.513169286642214 26.879204051232204 25.286733259877913 27 21.410934179278996 26.11938725703018 28.38678240812944 24.082896155561382 28 20.993722006361455 24.326951366835637 30.28914852129519 24.390178105507722 29 24.11838743153598 23.629433985805175 28.29017195143849 23.96200663122035 30 23.945146167574464 24.46554437800485 27.411573190851175 24.177736263569514 31 23.63668398517291 27.067619732475023 25.297945468202432 23.997750814149637 32 24.779992025000695 27.545782481472457 25.468404755662377 22.20582073786447 33 25.38325941425063 25.203611174103674 25.000611191807167 24.412518219838528 34 22.69072767232026 24.30182927600326 28.597622506021292 24.409820545655183 35 22.959146253562825 24.233713002873866 28.741779470193652 24.065361273369657 36 23.446582257565503 25.358558835009404 27.82330571308381 23.371553194341292 37 22.738189877483443 26.796250570094426 27.144840655973194 23.320718896448934 38 23.923058960198347 27.205116813507253 25.455422198655043 23.416402027639357 39 26.14391923163495 23.81237001636308 26.951113928681924 23.092596823320044 40 24.317593809512168 22.97575381025403 29.49046835838939 23.216184021844416 41 20.079716272117768 25.843887281056343 28.365538223935623 25.71085822289027 42 22.84230324049681 25.24222163585276 26.687837788851354 25.22763733479907 43 23.858989198343966 23.67141654028344 27.51770980950205 24.951884451870544 44 23.47111423217027 23.15607646894682 27.59476212836377 25.77804717051914 45 23.93022465724785 23.032826479695366 26.907108118566153 26.129840744490636 46 23.683893283381398 24.827707137118562 27.895215590533525 23.593183988966512 47 20.38075985051513 25.327619884219192 30.315029332991628 23.976590932274046 48 21.736931243872277 23.76827990392908 29.35153813794725 25.14325071425139 49 22.676143371266566 22.226221898876 30.642628141631267 24.45500658822617 50 23.158605538493703 22.21197480709522 28.993000378517408 25.63641927589367 51 21.93200680825522 23.56460550308673 26.681768021938833 27.821619666719215 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 330.0 1 709.0 2 1088.0 3 1709.5 4 2331.0 5 1829.5 6 1328.0 7 1429.5 8 1531.0 9 1602.5 10 1674.0 11 1783.5 12 1893.0 13 1917.5 14 1942.0 15 2066.5 16 2191.0 17 2082.0 18 1973.0 19 1963.5 20 1954.0 21 2511.5 22 3069.0 23 4153.0 24 5237.0 25 5493.0 26 7279.0 27 8809.0 28 10674.5 29 12540.0 30 14317.0 31 16094.0 32 19054.5 33 22015.0 34 24612.5 35 27210.0 36 28155.0 37 29100.0 38 33266.5 39 37433.0 40 41389.0 41 45345.0 42 53928.0 43 62511.0 44 69829.5 45 77148.0 46 91690.5 47 106233.0 48 121920.0 49 137607.0 50 129043.0 51 120479.0 52 104621.5 53 88764.0 54 78296.0 55 67828.0 56 65494.0 57 63160.0 58 59980.0 59 56800.0 60 53898.0 61 50996.0 62 45500.0 63 40004.0 64 34809.0 65 29614.0 66 25007.5 67 20401.0 68 17107.5 69 13814.0 70 11209.0 71 8604.0 72 6685.5 73 4767.0 74 4026.0 75 2465.0 76 1645.0 77 1251.5 78 858.0 79 710.5 80 563.0 81 399.0 82 235.0 83 128.0 84 21.0 85 27.5 86 34.0 87 17.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1186207.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.571350960079062 #Duplication Level Percentage of deduplicated Percentage of total 1 68.20631383717782 16.759212749865927 2 12.391560818471765 6.089547796276686 3 5.1880906082500235 3.824351854440041 4 2.84947058446631 2.8006136712537324 5 1.8203524392694632 2.2364259328162994 6 1.2670088760081053 1.8679271857158273 7 0.9241597153822577 1.5895496896876964 8 0.7032375911487494 1.3823598128349208 9 0.5554985013412936 1.2284413770829385 >10 4.2579973059917515 24.224180377571056 >50 1.6347636196628152 27.617283227285565 >100 0.1929330215121667 7.181538925686308 >500 0.0062014185485924495 1.068333701605862 >1k 0.002067139516197483 1.6765728177737003 >5k 3.445232526995805E-4 0.4536608801034719 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGCT 5359 0.45177612339161716 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 4976 0.4194883355097382 No Hit CCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGC 4887 0.41198542918731723 No Hit TCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGC 3542 0.29859881116870834 No Hit GCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTGC 3344 0.2819069521592774 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 1577 0.13294475584784105 No Hit TCCTGTCTCTTATACACATCTGACGCTACGGTAGTCGTATGCCGTCTTCTG 1479 0.12468312866135504 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.46863658703750694 0.0 2 0.0 0.0 0.0 1.5341335871395128 0.0 3 0.0 0.0 0.0 2.112110280920615 0.0 4 0.0 0.0 0.0 2.7323224361346714 0.0 5 0.0 0.0 0.0 3.8058281564684746 0.0 6 0.0 0.0 0.0 4.540691464474581 0.0 7 0.0 0.0 0.0 5.2183134984028925 0.0 8 0.0 0.0 0.0 6.2746215458178884 0.0 9 0.0 0.0 0.0 6.845854054140635 0.0 10 0.0 0.0 0.0 7.767025485433824 0.0 11 0.0 0.0 0.0 9.385967204712163 0.0 12 0.0 0.0 0.0 10.83520835739462 0.0 13 0.0 0.0 0.0 11.31109494379986 0.0 14 0.0 0.0 0.0 11.490574579310357 0.0 15 0.0 0.0 0.0 11.775094903334747 0.0 16 0.0 0.0 0.0 12.443443682257818 0.0 17 0.0 0.0 0.0 13.355931974773375 0.0 18 0.0 0.0 0.0 14.381048164443474 0.0 19 0.0 0.0 0.0 15.053864966232707 0.0 20 0.0 0.0 0.0 15.785271879191406 0.0 21 0.0 0.0 0.0 16.758710747786854 0.0 22 0.0 0.0 0.0 17.63874264778407 0.0 23 0.0 0.0 0.0 18.492303619857243 0.0 24 0.0 0.0 0.0 19.189905303205933 0.0 25 0.0 0.0 0.0 19.817283155469493 0.0 26 0.0 0.0 0.0 20.381434269060964 0.0 27 0.0 0.0 0.0 20.938166778648245 0.0 28 0.0 0.0 0.0 21.492033009415724 0.0 29 8.4302318229449E-5 0.0 0.0 22.1111492344928 0.0 30 8.4302318229449E-5 0.0 0.0 22.74569278380586 0.0 31 8.4302318229449E-5 0.0 0.0 23.357474707196975 0.0 32 8.4302318229449E-5 0.0 0.0 23.948012446394262 0.0 33 8.4302318229449E-5 0.0 0.0 24.535515302135295 0.0 34 8.4302318229449E-5 0.0 0.0 25.08213153353504 0.0 35 8.4302318229449E-5 0.0 0.0 25.656820436905196 0.0 36 8.4302318229449E-5 0.0 0.0 26.23564015386859 0.0 37 8.4302318229449E-5 0.0 0.0 26.8213726609268 0.0 38 8.4302318229449E-5 0.0 0.0 27.406430749439178 0.0 39 8.4302318229449E-5 0.0 0.0 27.988791163768212 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGAATA 25 3.8908816E-5 45.0 9 GCGAAAA 25 3.8908816E-5 45.0 13 TAGGTAC 20 7.033379E-4 45.0 23 CGCGACT 25 3.8908816E-5 45.0 13 CTAACGA 20 7.033379E-4 45.0 41 TACGATC 40 6.8157533E-9 45.0 11 TATTCCG 20 7.033379E-4 45.0 14 GTCACGA 20 7.033379E-4 45.0 2 TGTTACG 40 6.8157533E-9 45.0 1 CTCGACG 25 3.8908816E-5 45.0 23 CGTCGGT 20 7.033379E-4 45.0 26 GCGCTTA 20 7.033379E-4 45.0 10 TCGCGAA 25 3.8908816E-5 45.0 12 ACGACCG 40 6.8157533E-9 45.0 18 TACCGTT 20 7.033379E-4 45.0 39 GTACGCC 20 7.033379E-4 45.0 9 ACGAACG 90 0.0 45.0 21 CGAATAT 130 0.0 43.26923 14 TCCGATA 120 0.0 43.125004 14 CGATAAC 95 0.0 42.63158 16 >>END_MODULE