##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935326.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1283730 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32500525811503 33.0 31.0 34.0 30.0 34.0 2 32.47806080717908 34.0 31.0 34.0 31.0 34.0 3 32.54244662039525 34.0 31.0 34.0 31.0 34.0 4 35.973933771120095 37.0 35.0 37.0 35.0 37.0 5 31.678727614062147 37.0 35.0 37.0 0.0 37.0 6 33.413451426701876 37.0 35.0 37.0 17.0 37.0 7 35.20475567292188 37.0 35.0 37.0 32.0 37.0 8 35.75188474211867 37.0 35.0 37.0 35.0 37.0 9 37.75607954943796 39.0 38.0 39.0 35.0 39.0 10 37.543409439679685 39.0 37.0 39.0 35.0 39.0 11 37.488722706488126 39.0 37.0 39.0 35.0 39.0 12 37.31003404142616 39.0 37.0 39.0 35.0 39.0 13 37.223242426366916 39.0 37.0 39.0 34.0 39.0 14 38.45106759209491 40.0 38.0 41.0 34.0 41.0 15 38.54335491107943 40.0 38.0 41.0 34.0 41.0 16 38.598060339791076 40.0 38.0 41.0 35.0 41.0 17 38.591436672820606 40.0 38.0 41.0 35.0 41.0 18 38.56474725993784 40.0 38.0 41.0 35.0 41.0 19 38.5763486091312 40.0 38.0 41.0 34.0 41.0 20 38.49680696096531 40.0 38.0 41.0 34.0 41.0 21 38.44786676326019 40.0 38.0 41.0 34.0 41.0 22 38.413322895001286 40.0 38.0 41.0 34.0 41.0 23 38.368722394896125 40.0 37.0 41.0 34.0 41.0 24 38.334236171157485 40.0 37.0 41.0 34.0 41.0 25 38.26786240097217 40.0 37.0 41.0 34.0 41.0 26 38.238155219555516 40.0 37.0 41.0 34.0 41.0 27 38.183400715103645 40.0 37.0 41.0 34.0 41.0 28 38.169093189377826 40.0 37.0 41.0 34.0 41.0 29 38.126305375741005 40.0 37.0 41.0 34.0 41.0 30 38.080949265032366 40.0 37.0 41.0 34.0 41.0 31 37.88594408481534 40.0 37.0 41.0 34.0 41.0 32 37.937418304472125 40.0 37.0 41.0 34.0 41.0 33 37.940529550606435 40.0 37.0 41.0 34.0 41.0 34 37.91564815031198 40.0 37.0 41.0 34.0 41.0 35 37.82669720268281 40.0 36.0 41.0 33.0 41.0 36 37.80171453498789 40.0 36.0 41.0 33.0 41.0 37 37.7722387106323 40.0 36.0 41.0 33.0 41.0 38 37.75776292522571 40.0 36.0 41.0 33.0 41.0 39 37.75251104204155 40.0 36.0 41.0 33.0 41.0 40 37.66598428018353 40.0 36.0 41.0 33.0 41.0 41 37.61293963683952 40.0 36.0 41.0 33.0 41.0 42 37.57056078770458 40.0 36.0 41.0 33.0 41.0 43 37.50905953744167 40.0 35.0 41.0 33.0 41.0 44 37.46430713623581 39.0 35.0 41.0 33.0 41.0 45 37.45626338871881 39.0 35.0 41.0 33.0 41.0 46 37.375395137606816 39.0 35.0 41.0 33.0 41.0 47 37.33068090642113 39.0 35.0 41.0 33.0 41.0 48 37.31190047751474 39.0 35.0 41.0 33.0 41.0 49 37.28496412797084 39.0 35.0 41.0 33.0 41.0 50 37.21242706799716 39.0 35.0 41.0 33.0 41.0 51 36.57471353010368 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 6.0 10 17.0 11 19.0 12 13.0 13 19.0 14 26.0 15 26.0 16 62.0 17 89.0 18 165.0 19 234.0 20 415.0 21 731.0 22 1207.0 23 1719.0 24 2642.0 25 3828.0 26 5349.0 27 6749.0 28 8654.0 29 11071.0 30 14506.0 31 19750.0 32 27497.0 33 41520.0 34 68982.0 35 103294.0 36 103526.0 37 164249.0 38 268282.0 39 428543.0 40 537.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.756085781277996 5.332975002531684 54.38277519416077 16.528164022029554 2 19.58083086007182 4.980174958908805 52.58932953191091 22.84966464910846 3 21.083872776985814 4.907028736572332 50.95206936037952 23.057029126062332 4 19.19546945229916 5.114626907527284 48.98389848332593 26.706005156847624 5 16.619226784448443 17.47711746239474 43.03700933997025 22.866646413186572 6 21.202355635530836 6.801040717284787 52.71085041246991 19.285753234714463 7 81.44119090462948 3.3129240572394503 9.471773659570157 5.774111378560912 8 82.48494621143075 3.589306162510808 7.697023517406308 6.228724108652131 9 76.23090525266217 6.30576523100652 10.597867152750188 6.865462363581126 10 35.86026656695723 28.571818061430363 17.892080110303567 17.67583526130884 11 27.9036090143566 25.159651951734396 25.83681926884937 21.09991976505963 12 25.147967251680647 21.34857018220342 32.35906304285169 21.144399523264237 13 22.552483777741426 25.54361119550061 31.684933747750694 20.218971279007267 14 18.38478496257001 27.731766025566124 31.311646530033578 22.571802481830293 15 16.970936256066306 24.03028674253932 36.70951056686375 22.289266434530624 16 18.79935812047705 24.06853466071526 33.71994110911173 23.412166109695963 17 19.949444197767445 23.555264736354218 28.581711107475872 27.91357995840247 18 20.429140083974044 23.522158086201927 32.17935235602502 23.869349473799005 19 22.32354155468829 24.79431033005383 29.495922039681243 23.38622607557664 20 24.615144929229665 25.4350213830011 28.94767591315931 21.002157774609927 21 23.628800448692484 25.873898717019934 28.79647589446379 21.700824939823796 22 22.786255676816776 24.659079401431764 27.910464038388135 24.644200883363325 23 21.21333925358136 25.672610284094006 27.40864512007977 25.705405342244863 24 22.75034469865159 23.39892344963505 29.413428057301772 24.437303794411598 25 21.012440310657226 25.463843643133682 27.640859059147953 25.882856987061142 26 19.512825905758998 26.81436127534606 27.57706059685448 26.09575222204046 27 19.929112819673918 25.884337049067952 30.0803907363698 24.106159394888333 28 18.520794871195655 24.942783918736804 31.78028090018929 24.756140309878248 29 19.06522399570003 23.027194191925094 30.611499302812895 27.29608250956198 30 20.22348936302805 24.476486488591835 31.004416816620317 24.295607331759793 31 20.836858217849546 25.73578556238461 28.000046738800215 25.427309480965626 32 21.4774134747961 25.158639277729737 27.465900150343142 25.898047097131016 33 21.3198258200712 24.376699150132815 28.528662569231848 25.77481246056414 34 19.725876936739034 23.17722574061524 30.262048873205426 26.8348484494403 35 19.903484377556026 22.778855366782736 29.91929767162877 27.398362584032466 36 22.27173938445 23.54303475029796 29.997351467987816 24.187874397264224 37 20.56522789060005 24.582271973078452 31.140037235244172 23.71246290107733 38 20.03700155017021 24.564277534995675 29.383671021164886 26.01504989366923 39 21.805286158304316 22.69643928240362 29.49265032366619 26.005624235625874 40 21.162705553348445 23.06185880208455 29.90434125555997 25.871094389007034 41 19.564705973997647 23.309418647223325 29.02611919952015 28.09975617925888 42 21.282278983898482 22.683741908345212 30.203781168937393 25.830197938818912 43 22.316297040654966 22.54516136570774 29.663402740451655 25.475138853185637 44 20.349917817609622 22.805963870907433 29.62048094225421 27.223637369228733 45 19.612067958215512 22.843199115078715 28.518535829185264 29.026197097520505 46 21.042197346794108 22.8355651110436 30.861318189962063 25.26091935220023 47 18.527416201226117 23.29321586314879 32.991672703761694 25.1876952318634 48 19.406728829270953 21.457705280705444 32.346521464793994 26.7890444252296 49 20.9780872924992 20.10500650448303 33.32305079728604 25.593855405731738 50 20.124636800573327 20.66088663504008 31.041262570789808 28.173213993596786 51 19.27103051264674 21.470714246765287 29.013188131460666 30.245067109127312 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 377.0 1 664.0 2 951.0 3 1531.0 4 2111.0 5 1620.0 6 1129.0 7 1241.0 8 1353.0 9 1721.5 10 2090.0 11 2118.5 12 2147.0 13 2103.5 14 2060.0 15 1994.5 16 1929.0 17 2200.5 18 2472.0 19 2626.5 20 2781.0 21 2925.0 22 3069.0 23 3539.5 24 4010.0 25 5690.5 26 9463.0 27 11555.0 28 12938.5 29 14322.0 30 16446.5 31 18571.0 32 23193.0 33 27815.0 34 31983.0 35 36151.0 36 37995.0 37 39839.0 38 44735.5 39 49632.0 40 55186.0 41 60740.0 42 69140.0 43 77540.0 44 85126.5 45 92713.0 46 108283.5 47 123854.0 48 137142.0 49 150430.0 50 142535.0 51 134640.0 52 114629.0 53 94618.0 54 81532.5 55 68447.0 56 62842.5 57 57238.0 58 53707.0 59 50176.0 60 46623.5 61 43071.0 62 38303.5 63 33536.0 64 28619.5 65 23703.0 66 18896.5 67 14090.0 68 12216.5 69 10343.0 70 8913.0 71 7483.0 72 5886.5 73 4290.0 74 3412.5 75 2018.5 76 1502.0 77 1091.0 78 680.0 79 484.0 80 288.0 81 176.0 82 64.0 83 37.0 84 10.0 85 5.5 86 1.0 87 1.0 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1283730.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.17891343701313 #Duplication Level Percentage of deduplicated Percentage of total 1 67.0279207177671 16.206622928978696 2 12.554064261740372 6.070872661346412 3 5.534640604076251 4.0146478821281315 4 3.1529060118215635 3.0493536613948753 5 1.982485271792304 2.3967169888409785 6 1.353113219408147 1.9630084441528646 7 1.038244837663223 1.757254243939937 8 0.7524482176773073 1.4554704256843543 9 0.5889020462362804 1.2815110438944235 >10 4.218809488907245 21.41915205420273 >50 1.4749659210842854 25.67693351345265 >100 0.3095681301438596 10.784511850555875 >500 0.008061670055459505 1.361961949993926 >1k 0.003224668022183802 1.6994896166714908 >5k 6.449336044367604E-4 0.8624927347625835 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGC 5670 0.4416816620317356 TruSeq Adapter, Index 16 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGC 5392 0.4200260179321197 TruSeq Adapter, Index 16 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGC 4999 0.38941210379129565 TruSeq Adapter, Index 16 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTGCT 4855 0.37819479173969606 TruSeq Adapter, Index 13 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTG 2320 0.18072336083132745 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 1851 0.14418919866327032 No Hit GCCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCTG 1627 0.12674004658300422 No Hit TTCCTGTCTCTTATACACATCTGACGCCTTCTCTGTCGTATGCCGTCTTCT 1343 0.10461701448123827 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 1343 0.10461701448123827 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.557960007166616E-4 0.0 0.0 0.38902261378950403 0.0 2 1.557960007166616E-4 0.0 0.0 1.7125875378779027 0.0 3 1.557960007166616E-4 0.0 0.0 2.4611873213214617 0.0 4 1.557960007166616E-4 0.0 0.0 3.2638483170137023 0.0 5 1.557960007166616E-4 0.0 0.0 4.685253129552164 0.0 6 1.557960007166616E-4 0.0 0.0 5.63046746590015 0.0 7 1.557960007166616E-4 0.0 0.0 6.468805745756506 0.0 8 1.557960007166616E-4 0.0 0.0 7.80475645190188 0.0 9 1.557960007166616E-4 0.0 0.0 8.441105216829085 0.0 10 1.557960007166616E-4 0.0 0.0 9.644785118366011 0.0 11 1.557960007166616E-4 0.0 0.0 11.65112601559518 0.0 12 1.557960007166616E-4 0.0 0.0 13.356235345438682 0.0 13 1.557960007166616E-4 0.0 0.0 13.905961533967423 0.0 14 1.557960007166616E-4 0.0 0.0 14.118623074945667 0.0 15 1.557960007166616E-4 0.0 0.0 14.458024662506913 0.0 16 1.557960007166616E-4 0.0 0.0 15.285301426312387 0.0 17 1.557960007166616E-4 0.0 0.0 16.470831093765824 0.0 18 1.557960007166616E-4 0.0 0.0 17.747423523638147 0.0 19 1.557960007166616E-4 0.0 0.0 18.525702445218233 0.0 20 1.557960007166616E-4 0.0 0.0 19.34526730698823 0.0 21 1.557960007166616E-4 0.0 0.0 20.441915356032812 0.0 22 1.557960007166616E-4 0.0 0.0 21.44570898865026 0.0 23 1.557960007166616E-4 0.0 0.0 22.446931987255887 0.0 24 1.557960007166616E-4 0.0 0.0 23.221783396820204 0.0 25 1.557960007166616E-4 0.0 0.0 23.96025644021718 0.0 26 1.557960007166616E-4 0.0 0.0 24.583752035085258 0.0 27 1.557960007166616E-4 0.0 0.0 25.19727668590747 0.0 28 1.557960007166616E-4 0.0 0.0 25.818746932766235 0.0 29 1.557960007166616E-4 0.0 0.0 26.46872784775615 0.0 30 1.557960007166616E-4 0.0 0.0 27.19847631511299 0.0 31 2.336940010749924E-4 0.0 0.0 27.912255692396375 0.0 32 3.89490001791654E-4 0.0 0.0 28.573531817438248 0.0 33 3.89490001791654E-4 0.0 0.0 29.223201140426724 0.0 34 3.89490001791654E-4 0.0 0.0 29.861575253363245 0.0 35 3.89490001791654E-4 0.0 0.0 30.51186776035459 0.0 36 3.89490001791654E-4 0.0 0.0 31.15125454729577 0.0 37 3.89490001791654E-4 0.0 0.0 31.790563436236592 0.0 38 3.89490001791654E-4 0.0 0.0 32.432520857189594 0.0 39 3.89490001791654E-4 0.0 0.0 33.066922172107844 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTC 20 7.0335943E-4 45.000004 12 GTCGATT 20 7.0335943E-4 45.000004 31 ACGTTAC 20 7.0335943E-4 45.000004 21 CGTTGCA 20 7.0335943E-4 45.000004 31 TAGCGCA 40 6.8157533E-9 45.000004 24 ATAGCGG 20 7.0335943E-4 45.000004 2 TACGGTA 20 7.0335943E-4 45.000004 4 TCTACGA 20 7.0335943E-4 45.000004 42 CAATCGA 20 7.0335943E-4 45.000004 41 AGTCGAT 20 7.0335943E-4 45.000004 30 CTAGCGT 20 7.0335943E-4 45.000004 30 TCGTTAG 45 3.8562575E-10 45.0 1 GGTACGA 25 3.8910614E-5 45.0 16 CTATCCG 25 3.8910614E-5 45.0 1 CGCGAAT 25 3.8910614E-5 45.0 21 ATGCGTC 35 1.2120836E-7 45.0 12 CGCGTTA 25 3.8910614E-5 45.0 35 CGTCCCA 45 3.8562575E-10 45.0 37 TATCGAG 25 3.8910614E-5 45.0 23 CGATAAC 50 2.1827873E-11 45.0 16 >>END_MODULE