SRR2935325.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935325.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	3581273
Sequences flagged as poor quality	0
Sequence length	51
%GC	49

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA	20858	0.5824185980795097	No Hit
GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT	10922	0.3049753537359481	No Hit
GCTCAACTTGACCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATG	7240	0.20216275050798974	No Hit
GCTCAACTTGACCCCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTA	7057	0.19705283568161377	No Hit
CCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC	6949	0.19403714824309679	No Hit
CTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGCT	6307	0.17611056180302367	No Hit
GCTCAACTTGACCCTGCATTAGAACTGTCTCTTATACACATCTGACGCAGG	5569	0.155503364306491	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5518	0.1540792896827469	No Hit
TCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC	4980	0.13905669855383826	No Hit
GCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC	4818	0.1345331673960628	No Hit
GCTCAACCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTC	4467	0.12473218322088264	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG	3997	0.11160835825696618	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCTTAT	20	7.035287E-4	45.000004	32
CGACGTA	25	3.8924656E-5	45.0	33
TACGGGA	1635	0.0	41.972477	4
TTGACCC	6835	0.0	41.839798	8
CTTGACC	7720	0.0	41.823185	7
CTCAACT	7505	0.0	41.822117	2
TGCATTA	5795	0.0	41.738567	15
ACTTGAC	7380	0.0	41.615856	6
GCATTAG	5825	0.0	41.600857	16
TTACGGG	2715	0.0	41.187847	3
TCAACTT	7455	0.0	41.016098	3
TATGGGA	4645	0.0	40.97955	4
AACTTGA	7500	0.0	40.829998	5
CATTAGA	5905	0.0	40.656223	17
CCTGCAT	6240	0.0	40.492786	13
TTTACGG	1640	0.0	40.47256	2
TTATGGG	6935	0.0	40.392933	3
ACCCTGC	6320	0.0	40.300632	11
GCTCAAC	8230	0.0	40.29769	1
TTTTACG	965	0.0	40.103626	1