##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935325.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3581273 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.46647267605681 34.0 31.0 34.0 31.0 34.0 2 32.6264817007807 34.0 31.0 34.0 31.0 34.0 3 32.67970607099766 34.0 31.0 34.0 31.0 34.0 4 36.08216435887462 37.0 35.0 37.0 35.0 37.0 5 31.84363911938576 37.0 35.0 37.0 0.0 37.0 6 33.461889668841216 37.0 35.0 37.0 17.0 37.0 7 35.26777238149675 37.0 35.0 37.0 32.0 37.0 8 35.81612208843057 37.0 35.0 37.0 35.0 37.0 9 37.883789926096114 39.0 38.0 39.0 35.0 39.0 10 37.673222622235166 39.0 37.0 39.0 35.0 39.0 11 37.57831949700567 39.0 37.0 39.0 35.0 39.0 12 37.36623904404942 39.0 37.0 39.0 35.0 39.0 13 37.301905774845984 39.0 37.0 39.0 35.0 39.0 14 38.46505390680912 40.0 38.0 41.0 34.0 41.0 15 38.58581487644198 40.0 38.0 41.0 34.0 41.0 16 38.66817413807883 40.0 38.0 41.0 35.0 41.0 17 38.682704725386756 40.0 38.0 41.0 35.0 41.0 18 38.625511933884965 40.0 38.0 41.0 35.0 41.0 19 38.631529905706714 40.0 38.0 41.0 35.0 41.0 20 38.552812924342824 40.0 38.0 41.0 34.0 41.0 21 38.49094218731719 40.0 38.0 41.0 34.0 41.0 22 38.487819833897056 40.0 38.0 41.0 34.0 41.0 23 38.42503014989363 40.0 37.0 41.0 34.0 41.0 24 38.40991820506284 40.0 37.0 41.0 34.0 41.0 25 38.31892486275132 40.0 37.0 41.0 34.0 41.0 26 38.261224988991344 40.0 37.0 41.0 34.0 41.0 27 38.226036384268944 40.0 37.0 41.0 34.0 41.0 28 38.16831612669573 40.0 37.0 41.0 34.0 41.0 29 38.10917737910514 40.0 37.0 41.0 34.0 41.0 30 38.056519008743535 40.0 37.0 41.0 34.0 41.0 31 37.84028193326786 40.0 36.0 41.0 33.0 41.0 32 37.85060926659319 40.0 36.0 41.0 33.0 41.0 33 37.83606025008426 40.0 36.0 41.0 33.0 41.0 34 37.72059683805172 40.0 36.0 41.0 33.0 41.0 35 37.57630289564632 40.0 36.0 41.0 33.0 41.0 36 37.525330797177425 40.0 36.0 41.0 33.0 41.0 37 37.46842421675198 40.0 35.0 41.0 33.0 41.0 38 37.45903202576291 40.0 35.0 41.0 33.0 41.0 39 37.442107038474866 40.0 35.0 41.0 33.0 41.0 40 37.352271385063354 39.0 35.0 41.0 33.0 41.0 41 37.25292710162001 39.0 35.0 41.0 33.0 41.0 42 37.229603272355945 39.0 35.0 41.0 33.0 41.0 43 37.16936714961412 39.0 35.0 41.0 33.0 41.0 44 37.10901989320557 39.0 35.0 41.0 33.0 41.0 45 37.05588292207827 39.0 35.0 41.0 33.0 41.0 46 36.98333860613251 39.0 35.0 41.0 33.0 41.0 47 36.93169663412982 39.0 35.0 41.0 33.0 41.0 48 36.87987455857177 39.0 35.0 41.0 33.0 41.0 49 36.82767021670786 39.0 35.0 41.0 32.0 41.0 50 36.7489993083465 38.0 35.0 41.0 32.0 41.0 51 36.13696107501439 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 20.0 10 32.0 11 34.0 12 45.0 13 63.0 14 75.0 15 115.0 16 183.0 17 302.0 18 493.0 19 859.0 20 1455.0 21 2368.0 22 3837.0 23 5882.0 24 8835.0 25 12788.0 26 17656.0 27 21770.0 28 26542.0 29 32471.0 30 41713.0 31 55369.0 32 76798.0 33 120675.0 34 211668.0 35 269160.0 36 294873.0 37 477052.0 38 749315.0 39 1147369.0 40 1455.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.986673733055255 4.331895390270443 54.49296939942864 16.18846147724566 2 19.591916058898608 4.381430848751268 51.71585634493656 24.31079674741356 3 20.311799742717184 4.5763056879495085 53.02131392943236 22.09058063990095 4 18.54737128389821 4.904876003588668 49.00109542053901 27.546657291974107 5 16.173857731594325 18.936618347721605 42.27826250609769 22.611261414586377 6 21.0221895957108 8.879300740267498 51.158596398543196 18.939913265478506 7 82.62246413495983 2.591285277609386 7.913247607764055 6.873002979666727 8 84.93463078631537 2.7995352490580863 8.121246271926212 4.144587692700333 9 79.67532773960544 5.2576555878314775 10.094343547671457 4.972673124891624 10 42.45029630525235 28.773790772163977 14.53243022802227 14.243482694561402 11 29.697568434464504 26.32424280416489 24.52114094625012 19.45704781512049 12 26.5932253698615 21.20606276036482 28.957217168308585 23.243494701465092 13 25.845418654204806 20.692306897575246 29.867731390486007 23.59454305773394 14 22.230893874887506 22.491248223746137 30.958991397751586 24.318866503614775 15 20.910413699262804 21.824055301006094 34.315982054425895 22.949548945305203 16 26.304501220655336 22.041715334184243 29.93737143189028 21.71641201327014 17 25.101772470291987 22.34401007686373 27.613728414449273 24.940489038395004 18 24.8315612911945 23.785341134283815 29.332139716799027 22.050957857722658 19 24.910248394914323 25.11054030228916 28.319594736285115 21.659616566511406 20 26.636896991656318 26.237206713925467 28.027547746290217 19.098348548127998 21 26.786871595658862 26.647200590404584 27.052950166044308 19.512977647892242 22 27.400563989397064 23.015335608315816 27.425108334382774 22.158992067904347 23 25.061004843808334 24.673907853436475 28.01727207057379 22.247815232181406 24 24.446642297306013 25.9301650558335 27.084503192021387 22.538689454839105 25 24.50000321114866 26.265157668795425 24.865348159718625 24.369490960337288 26 23.16427706014035 25.714375865788508 26.884797668315148 24.236549405755998 27 23.095418863627543 23.708832027047364 28.380048100214644 24.815701009110448 28 23.180975033179543 24.63774752720611 27.350190839961098 24.83108659965325 29 22.27833510598047 26.262728365025513 26.886528896289114 24.572407632704905 30 23.96781814734593 25.321024116284907 27.25377261102407 23.45738512534509 31 25.306169063347028 25.457176819527582 25.830368140044058 23.406285977081335 32 25.237673866248116 26.629246080932674 24.513490035526473 23.619590017292733 33 25.23962847847679 24.848063803010827 25.398203376285473 24.51410434222691 34 23.579827619955253 25.72833738170757 27.567515796757185 23.124319201579997 35 24.23160702912065 27.923869529075272 25.594390597980105 22.25013284382397 36 24.90703724625294 27.949642487461862 25.037828727382696 22.10549153890251 37 24.630990153501283 28.770691315629943 24.374098260590575 22.224220270278195 38 24.46495980619182 26.993920876738525 24.446642297306013 24.094477019763644 39 23.843811962952838 25.24610662186323 26.278839954396105 24.631241460787827 40 23.659799183139626 24.322440651690055 28.339029166444448 23.67873099872587 41 22.422948487870094 26.752358728306945 26.270211737558125 24.554481046264833 42 23.029492585457742 24.607841960107482 26.58683099557057 25.77583445886421 43 23.4216436445923 24.180256573570347 27.95324455856898 24.444855223268373 44 24.735841138053424 23.51420849513567 27.12529874153688 24.62465162527403 45 22.964794920688817 24.385127858166637 26.28023610598801 26.36984111515654 46 22.880411518474016 24.23057387694264 27.909154091296585 24.979860513286756 47 22.086336339061557 25.333645326675736 28.989049424604048 23.59096890965866 48 22.297378613694068 24.84792418785164 28.080657352846323 24.774039845607973 49 23.624504470896245 24.23886701739856 27.954864094415587 24.181764417289607 50 21.788146282062275 24.288681706197767 28.335399172305493 25.587772839434468 51 21.896822721976235 24.22462627116112 26.74172005317662 27.13683095368602 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 573.0 1 1664.0 2 2755.0 3 7436.0 4 12117.0 5 8356.5 6 4596.0 7 4660.0 8 4724.0 9 5163.5 10 5603.0 11 5424.0 12 5245.0 13 5251.5 14 5258.0 15 5395.0 16 5532.0 17 5385.0 18 5238.0 19 5931.5 20 6625.0 21 7945.5 22 9266.0 23 10443.0 24 11620.0 25 15786.0 26 24469.5 27 28987.0 28 33854.5 29 38722.0 30 56375.0 31 74028.0 32 72999.5 33 71971.0 34 80497.0 35 89023.0 36 95705.0 37 102387.0 38 116957.5 39 131528.0 40 140406.0 41 149284.0 42 160089.5 43 170895.0 44 185413.0 45 199931.0 46 233102.5 47 266274.0 48 294405.5 49 322537.0 50 320715.0 51 318893.0 52 289102.5 53 259312.0 54 242390.5 55 225469.0 56 215599.5 57 205730.0 58 195728.5 59 185727.0 60 176170.0 61 166613.0 62 158116.0 63 149619.0 64 136924.5 65 124230.0 66 104708.5 67 85187.0 68 65713.0 69 46239.0 70 36980.0 71 27721.0 72 23077.0 73 18433.0 74 14933.5 75 8827.5 76 6221.0 77 4761.0 78 3301.0 79 2345.5 80 1390.0 81 1057.5 82 725.0 83 476.5 84 228.0 85 137.0 86 46.0 87 50.5 88 55.0 89 40.0 90 25.0 91 14.5 92 4.0 93 2.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3581273.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 22.067073297247777 #Duplication Level Percentage of deduplicated Percentage of total 1 70.39652586312837 15.534452960932526 2 12.107853272446553 5.343697712707988 3 4.7977937145807905 3.17619796694187 4 2.3179207077018993 2.0459890461626498 5 1.4018770621591978 1.5467661942198698 6 0.844453337980355 1.1180768223190827 7 0.6044094352356946 0.9336283116225943 8 0.45255149547957896 0.7989189617221572 9 0.3533544469561888 0.7017748632801603 >10 4.423696969189062 24.92208522547449 >50 2.041505396517512 31.382748706558576 >100 0.24754178841762428 7.855798135588193 >500 0.006146012458714012 0.9138982085025232 >1k 0.0032778733113141296 1.6035940368628976 >5k 8.194683278285324E-4 1.1645624369797651 >10k+ 2.731561092761775E-4 0.957810410124662 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 20858 0.5824185980795097 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT 10922 0.3049753537359481 No Hit GCTCAACTTGACCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATG 7240 0.20216275050798974 No Hit GCTCAACTTGACCCCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTA 7057 0.19705283568161377 No Hit CCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC 6949 0.19403714824309679 No Hit CTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGCT 6307 0.17611056180302367 No Hit GCTCAACTTGACCCTGCATTAGAACTGTCTCTTATACACATCTGACGCAGG 5569 0.155503364306491 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5518 0.1540792896827469 No Hit TCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC 4980 0.13905669855383826 No Hit GCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC 4818 0.1345331673960628 No Hit GCTCAACCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTC 4467 0.12473218322088264 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 3997 0.11160835825696618 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3961515919060067E-4 0.0 0.0 0.18161139907513335 0.0 2 1.3961515919060067E-4 0.0 0.0 0.6799258252582252 0.0 3 1.3961515919060067E-4 0.0 0.0 1.0056479916498966 0.0 4 1.3961515919060067E-4 0.0 0.0 1.3672791769853905 0.0 5 1.3961515919060067E-4 0.0 0.0 2.0893129342555006 0.0 6 1.3961515919060067E-4 0.0 0.0 2.714928462588582 0.0 7 1.3961515919060067E-4 0.0 0.0 3.2386807707762015 0.0 8 1.3961515919060067E-4 0.0 0.0 4.1539977544297795 0.0 9 1.675381910287208E-4 0.0 0.0 4.628940602964365 0.0 10 1.675381910287208E-4 0.0 0.0 5.347037212745301 0.0 11 1.675381910287208E-4 0.0 0.0 6.546638583542779 0.0 12 1.675381910287208E-4 0.0 0.0 7.540866055170885 0.0 13 1.675381910287208E-4 0.0 0.0 8.104073607345768 0.0 14 1.675381910287208E-4 0.0 0.0 8.246620684879371 0.0 15 1.675381910287208E-4 0.0 0.0 8.655972331626213 0.0 16 1.675381910287208E-4 0.0 0.0 9.080514107692991 0.0 17 1.954612228668409E-4 0.0 0.0 9.667651698153144 0.0 18 1.954612228668409E-4 0.0 0.0 10.273078874467263 0.0 19 1.954612228668409E-4 0.0 0.0 10.724426761098638 0.0 20 1.954612228668409E-4 0.0 0.0 11.248681683859342 0.0 21 2.2338425470496106E-4 0.0 0.0 11.888984726939276 0.0 22 2.2338425470496106E-4 0.0 0.0 12.57309900697322 0.0 23 2.2338425470496106E-4 0.0 0.0 13.26304920066133 0.0 24 2.2338425470496106E-4 0.0 0.0 13.807017783899747 0.0 25 2.2338425470496106E-4 0.0 0.0 14.443383679490506 0.0 26 2.2338425470496106E-4 0.0 0.0 14.879150514356208 0.0 27 2.2338425470496106E-4 0.0 0.0 15.353814132572412 0.0 28 2.2338425470496106E-4 0.0 0.0 15.79203819423987 0.0 29 2.2338425470496106E-4 0.0 0.0 16.280914635661677 0.0 30 2.513072865430812E-4 0.0 0.0 16.820834379283568 0.0 31 2.513072865430812E-4 0.0 0.0 17.28527816784702 0.0 32 2.513072865430812E-4 0.0 0.0 17.841895884508105 0.0 33 2.513072865430812E-4 0.0 0.0 18.298214070806665 0.0 34 2.513072865430812E-4 0.0 0.0 18.87784036570236 0.0 35 2.513072865430812E-4 0.0 0.0 19.382353704953516 0.0 36 2.513072865430812E-4 0.0 0.0 19.861987622836907 0.0 37 2.513072865430812E-4 0.0 0.0 20.353488829251496 0.0 38 2.7923031838120133E-4 0.0 0.0 20.896731413662124 0.0 39 2.7923031838120133E-4 0.0 0.0 21.662911484268303 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCTTAT 20 7.035287E-4 45.000004 32 CGACGTA 25 3.8924656E-5 45.0 33 TACGGGA 1635 0.0 41.972477 4 TTGACCC 6835 0.0 41.839798 8 CTTGACC 7720 0.0 41.823185 7 CTCAACT 7505 0.0 41.822117 2 TGCATTA 5795 0.0 41.738567 15 ACTTGAC 7380 0.0 41.615856 6 GCATTAG 5825 0.0 41.600857 16 TTACGGG 2715 0.0 41.187847 3 TCAACTT 7455 0.0 41.016098 3 TATGGGA 4645 0.0 40.97955 4 AACTTGA 7500 0.0 40.829998 5 CATTAGA 5905 0.0 40.656223 17 CCTGCAT 6240 0.0 40.492786 13 TTTACGG 1640 0.0 40.47256 2 TTATGGG 6935 0.0 40.392933 3 ACCCTGC 6320 0.0 40.300632 11 GCTCAAC 8230 0.0 40.29769 1 TTTTACG 965 0.0 40.103626 1 >>END_MODULE