##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935321.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1095360 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39616929593924 33.0 31.0 34.0 31.0 34.0 2 32.550308574349984 34.0 31.0 34.0 31.0 34.0 3 32.604037941863865 34.0 31.0 34.0 31.0 34.0 4 36.020277351738244 37.0 35.0 37.0 35.0 37.0 5 31.586267528483788 37.0 35.0 37.0 0.0 37.0 6 33.41561313175577 37.0 35.0 37.0 17.0 37.0 7 35.24624324423021 37.0 35.0 37.0 32.0 37.0 8 35.80547217353199 37.0 35.0 37.0 35.0 37.0 9 37.86617459100204 39.0 38.0 39.0 35.0 39.0 10 37.593918894244815 39.0 37.0 39.0 35.0 39.0 11 37.53140793894245 39.0 37.0 39.0 35.0 39.0 12 37.32510681419807 39.0 37.0 39.0 35.0 39.0 13 37.262128432661406 39.0 37.0 39.0 34.0 39.0 14 38.4693689745837 40.0 38.0 41.0 34.0 41.0 15 38.5693032427695 40.0 38.0 41.0 35.0 41.0 16 38.63679612182296 40.0 38.0 41.0 35.0 41.0 17 38.63051051709027 40.0 38.0 41.0 35.0 41.0 18 38.62510681419807 40.0 38.0 41.0 35.0 41.0 19 38.66209100204499 40.0 38.0 41.0 35.0 41.0 20 38.57628816096991 40.0 38.0 41.0 34.0 41.0 21 38.52842900964067 40.0 38.0 41.0 34.0 41.0 22 38.51393149284254 40.0 38.0 41.0 34.0 41.0 23 38.45608475752264 40.0 38.0 41.0 34.0 41.0 24 38.43545592316681 40.0 37.0 41.0 34.0 41.0 25 38.329614921121824 40.0 37.0 41.0 34.0 41.0 26 38.2745353125913 40.0 37.0 41.0 34.0 41.0 27 38.23278830704061 40.0 37.0 41.0 34.0 41.0 28 38.162003359626055 40.0 37.0 41.0 34.0 41.0 29 38.09022787028922 40.0 37.0 41.0 34.0 41.0 30 38.05444967864447 40.0 37.0 41.0 34.0 41.0 31 37.85917963044113 40.0 36.0 41.0 34.0 41.0 32 37.87087806748466 40.0 36.0 41.0 34.0 41.0 33 37.89159454425942 40.0 36.0 41.0 34.0 41.0 34 37.81501332895121 40.0 36.0 41.0 33.0 41.0 35 37.72414822524102 40.0 36.0 41.0 33.0 41.0 36 37.72092827928717 40.0 36.0 41.0 33.0 41.0 37 37.666644756061935 40.0 36.0 41.0 33.0 41.0 38 37.645040899795504 40.0 36.0 41.0 33.0 41.0 39 37.67714450043821 40.0 36.0 41.0 33.0 41.0 40 37.614993244230206 40.0 36.0 41.0 33.0 41.0 41 37.569853746713406 40.0 36.0 41.0 33.0 41.0 42 37.535680506865326 40.0 35.0 41.0 33.0 41.0 43 37.49514862693544 39.0 35.0 41.0 33.0 41.0 44 37.432651365761025 39.0 35.0 41.0 33.0 41.0 45 37.44173057259714 39.0 35.0 41.0 33.0 41.0 46 37.382000438212096 39.0 35.0 41.0 33.0 41.0 47 37.341457602979844 39.0 35.0 41.0 33.0 41.0 48 37.30002464943033 39.0 35.0 41.0 33.0 41.0 49 37.26872808939527 39.0 35.0 41.0 33.0 41.0 50 37.1759220712825 39.0 35.0 41.0 33.0 41.0 51 36.52445040899796 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 9.0 11 9.0 12 14.0 13 15.0 14 21.0 15 18.0 16 40.0 17 60.0 18 105.0 19 183.0 20 341.0 21 645.0 22 974.0 23 1446.0 24 2140.0 25 3223.0 26 4429.0 27 5618.0 28 7097.0 29 9406.0 30 12320.0 31 16949.0 32 23410.0 33 35591.0 34 60358.0 35 89259.0 36 87479.0 37 139217.0 38 231649.0 39 362738.0 40 591.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.839796961729476 4.993883289512124 56.577837423312886 15.588482325445515 2 18.682716184633364 4.978271983640082 54.384220712825005 21.954791118901547 3 20.052128980426527 4.607069821793748 53.50943981887234 21.831361378907392 4 18.459045427987146 4.887616856558575 52.64588810984516 24.007449605609114 5 15.917141396435873 17.125419953257374 44.48318361086766 22.47425503943909 6 19.990870581361378 6.413234005258545 54.03255550686532 19.563339906514756 7 82.53414402570844 2.229769208296816 9.674079754601227 5.562007011393515 8 85.42981302950629 2.85394756061934 6.49987218813906 5.21636722173532 9 80.38507887817704 4.694620946538124 8.825774174700555 6.094526000584283 10 37.03960341805434 27.468868682442306 17.917853491089687 17.573674408413673 11 27.86408121530821 28.04110064271107 24.332456909144025 19.762361232836692 12 24.533943178498394 23.699149138182882 30.772257522640956 20.994650160677768 13 22.032391177329828 25.87441571720713 30.70168711656442 21.391505988898626 14 17.849930616418348 27.703677329827634 31.34540242477359 23.100989628980425 15 16.97880148992112 25.43319091440257 35.51681638913234 22.071191206543965 16 18.682259713701434 24.804904323692668 32.688248612328366 23.824587350277536 17 18.451102833771547 23.537284545720127 30.772896581945663 27.238716038562664 18 20.25032865907099 23.556730207420394 32.50748612328367 23.68545501022495 19 21.73623283669296 24.950244668419515 29.850186240140225 23.463336254747297 20 24.102304265264387 25.34500073035349 29.80773444347064 20.744960560911483 21 22.317502921413965 27.483658340636868 28.891505988898626 21.307332749050538 22 21.074623867952088 25.226866053169733 28.64017309377739 25.058336985100787 23 20.444146216768917 26.177055945077417 28.522677475898334 24.856120362255332 24 21.689125036517677 24.697998831434415 30.11968667835232 23.49318945369559 25 20.033139789658193 27.182478819748756 28.013803680981596 24.77057770961145 26 19.51449751679813 28.323382267017237 27.316316096990946 24.84580411919369 27 20.86829900671925 27.260717937481743 28.828056529360207 23.042926526438794 28 18.455211072158924 26.94127957931639 31.927859333917617 22.675650014607072 29 18.94975167981303 26.02642053754017 30.012324715162137 25.011503067484664 30 20.72807113643003 26.98993938066024 29.077746129126496 23.20424335378323 31 22.983859187846917 28.435765410458664 26.280400964066608 22.29997443762781 32 22.128615249780896 29.071812007011395 25.867751241600935 22.931821501606777 33 23.561477505112475 27.283997955010225 25.268131025416302 23.886393514461 34 21.396801051709026 25.828312153082088 28.79217791411043 23.982708881098453 35 21.17605170902717 28.056438066023954 26.004601226993866 24.76290899795501 36 23.874251387671634 26.984096552731522 26.962551124744376 22.17910093485247 37 22.400854513584576 27.93419515045282 28.603655419222907 21.0612949167397 38 19.86899284253579 28.795738387379494 27.671541776219687 23.66372699386503 39 21.78489263803681 26.16737876132048 28.178863569967866 23.868865030674847 40 23.108749634823255 24.965855974291557 28.34675357873211 23.578640812153083 41 21.403374233128837 26.25191717791411 26.58514095822378 25.759567630733276 42 22.026913526146654 26.005879345603272 27.6655163599182 24.301690768331873 43 22.541356266432956 24.802804557405782 28.863661262050833 23.79217791411043 44 20.889935728892784 24.87346625766871 28.492550394390886 25.744047619047617 45 20.855243938066025 26.48444347063979 26.11598013438504 26.544332456909142 46 21.80999853929302 26.582676015191353 27.611196319018404 23.996129126497227 47 19.540151183172654 26.27674919661116 30.17619777972539 24.006901840490798 48 19.785641250365178 25.54374817411627 30.32929813029506 24.341312445223487 49 21.94529652351738 23.781405200116858 30.56903666374525 23.70426161262051 50 21.100094945953842 23.986908413672218 28.94591732398481 25.967079316389132 51 20.3330411919369 24.59118463336255 27.14431784983932 27.93145632486123 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 185.0 1 469.5 2 754.0 3 1280.5 4 1807.0 5 1336.0 6 865.0 7 978.5 8 1092.0 9 1340.5 10 1589.0 11 1547.0 12 1505.0 13 1590.0 14 1675.0 15 1683.0 16 1691.0 17 1720.5 18 1750.0 19 2354.0 20 2958.0 21 3453.0 22 3948.0 23 4116.5 24 4285.0 25 5105.5 26 9095.0 27 12264.0 28 14171.5 29 16079.0 30 17889.0 31 19699.0 32 23294.5 33 26890.0 34 29882.5 35 32875.0 36 36704.0 37 40533.0 38 43259.0 39 45985.0 40 51638.5 41 57292.0 42 63862.5 43 70433.0 44 77556.0 45 84679.0 46 96640.0 47 108601.0 48 117483.5 49 126366.0 50 118720.0 51 111074.0 52 94871.5 53 78669.0 54 68034.0 55 57399.0 56 51003.5 57 44608.0 58 40811.5 59 37015.0 60 33408.0 61 29801.0 62 26122.5 63 22444.0 64 18812.5 65 15181.0 66 12423.0 67 9665.0 68 8396.5 69 7128.0 70 5786.0 71 4444.0 72 3640.0 73 2836.0 74 2198.0 75 1166.5 76 773.0 77 608.0 78 443.0 79 358.5 80 274.0 81 206.5 82 139.0 83 150.5 84 162.0 85 90.5 86 19.0 87 9.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1095360.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.0897908528527 #Duplication Level Percentage of deduplicated Percentage of total 1 67.63248049168918 16.292523099044327 2 12.673803813544597 6.106185663567526 3 5.434384359807588 3.927395479253358 4 2.920258022054038 2.8139361995058834 5 1.818817971137715 2.190747226205872 6 1.2299202057732872 1.7777112313665626 7 0.9494916909053418 1.6011139375301802 8 0.7059508386305795 1.3604966444005302 9 0.5576893793809697 1.2091158459130307 >10 4.173410227824112 21.796102375350657 >50 1.5982223771274513 27.50677440345104 >100 0.2948622649042818 10.000729421020162 >500 0.006883943927726209 1.1072101241058816 >1k 0.0038244132931812267 2.3099583492849702 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTGCT 4728 0.4316389132340053 No Hit TCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTGC 4205 0.38389205375401697 No Hit CCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTGC 4012 0.36627227578147825 No Hit GCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTGC 3401 0.31049152789950335 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 2354 0.21490651475314054 No Hit TCCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTG 1588 0.14497516798130294 No Hit TTTTTTGGGATTTTACTTCTACTCACAATTCTAGAATTTGCAGTAGCATTA 1275 0.11640008764241894 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 1255 0.11457420391469471 No Hit GCCTGTCTCTTATACACATCTGACGCAGTACGAGTCGTATGCCGTCTTCTG 1232 0.11247443762781187 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8258837277242187E-4 0.0 0.0 0.4485283377154543 0.0 2 1.8258837277242187E-4 0.0 0.0 1.5913489628980426 0.0 3 1.8258837277242187E-4 0.0 0.0 2.2304082676015193 0.0 4 1.8258837277242187E-4 0.0 0.0 2.9513584574934266 0.0 5 1.8258837277242187E-4 0.0 0.0 4.155437481741163 0.0 6 1.8258837277242187E-4 0.0 0.0 5.006573181419808 0.0 7 1.8258837277242187E-4 0.0 0.0 5.74906879929886 0.0 8 1.8258837277242187E-4 0.0 0.0 6.92174262342974 0.0 9 1.8258837277242187E-4 0.0 0.0 7.524010371019574 0.0 10 1.8258837277242187E-4 0.0 0.0 8.671852176453404 0.0 11 1.8258837277242187E-4 0.0 0.0 10.412101957347357 0.0 12 1.8258837277242187E-4 0.0 0.0 11.961638182880515 0.0 13 1.8258837277242187E-4 0.0 0.0 12.44485831142273 0.0 14 1.8258837277242187E-4 0.0 0.0 12.635297984224364 0.0 15 1.8258837277242187E-4 0.0 0.0 12.948984808647385 0.0 16 1.8258837277242187E-4 0.0 0.0 13.654506281040023 0.0 17 1.8258837277242187E-4 0.0 0.0 14.64340490797546 0.0 18 1.8258837277242187E-4 0.0 0.0 15.798185071574641 0.0 19 1.8258837277242187E-4 0.0 0.0 16.53721151037102 0.0 20 1.8258837277242187E-4 0.0 0.0 17.322250219106046 0.0 21 1.8258837277242187E-4 0.0 0.0 18.312609553023663 0.0 22 1.8258837277242187E-4 0.0 0.0 19.2909180543383 0.0 23 2.738825591586328E-4 0.0 0.0 20.238643003213557 0.0 24 2.738825591586328E-4 0.0 0.0 20.975113204791118 0.0 25 2.738825591586328E-4 0.0 0.0 21.6148115687993 0.0 26 2.738825591586328E-4 0.0 0.0 22.1954425942156 0.0 27 2.738825591586328E-4 0.0 0.0 22.807387525562373 0.0 28 2.738825591586328E-4 0.0 0.0 23.386831726555652 0.0 29 2.738825591586328E-4 0.0 0.0 24.0386722173532 0.0 30 2.738825591586328E-4 0.0 0.0 24.767930178206253 0.0 31 2.738825591586328E-4 0.0 0.0 25.398955594507743 0.0 32 2.738825591586328E-4 0.0 0.0 26.02705959684487 0.0 33 2.738825591586328E-4 0.0 0.0 26.589340490797547 0.0 34 2.738825591586328E-4 0.0 0.0 27.190512708150745 0.0 35 2.738825591586328E-4 0.0 0.0 27.818342827928717 0.0 36 2.738825591586328E-4 0.0 0.0 28.39176161262051 0.0 37 2.738825591586328E-4 0.0 0.0 28.99046888694128 0.0 38 2.738825591586328E-4 0.0 0.0 29.575573327490506 0.0 39 2.738825591586328E-4 0.0 0.0 30.222757814782355 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTCACG 30 2.1654068E-6 45.000004 1 CGACGGT 30 2.1654068E-6 45.000004 28 CTACGAT 30 2.1654068E-6 45.000004 44 ACCGTAC 30 2.1654068E-6 45.000004 11 GAACCGC 30 2.1654068E-6 45.000004 9 CCGCCGT 30 2.1654068E-6 45.000004 38 CGAACAG 20 7.0331414E-4 45.0 39 CGTATGG 195 0.0 45.0 2 CGAAATG 25 3.890685E-5 45.0 19 GATCGAA 35 1.2118653E-7 45.0 9 CTATCGT 25 3.890685E-5 45.0 31 ATCAGCG 20 7.0331414E-4 45.0 12 CGTTGCA 20 7.0331414E-4 45.0 41 GATCCGA 20 7.0331414E-4 45.0 10 GGTCCAC 35 1.2118653E-7 45.0 8 CGACCTA 25 3.890685E-5 45.0 29 ACCGAAC 20 7.0331414E-4 45.0 11 CGACCGA 20 7.0331414E-4 45.0 38 TCGATCC 20 7.0331414E-4 45.0 17 TATTGCG 80 0.0 45.0 1 >>END_MODULE