##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935320.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1282620 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.05079758619077 33.0 31.0 34.0 30.0 34.0 2 32.178108870904865 33.0 31.0 34.0 30.0 34.0 3 32.278796525861125 34.0 31.0 34.0 30.0 34.0 4 35.866188738675525 37.0 35.0 37.0 35.0 37.0 5 31.56916000062372 37.0 35.0 37.0 0.0 37.0 6 32.88497138669286 37.0 33.0 37.0 17.0 37.0 7 34.957253902169 37.0 35.0 37.0 32.0 37.0 8 35.3147019382202 37.0 35.0 37.0 33.0 37.0 9 37.39647440395441 39.0 37.0 39.0 34.0 39.0 10 37.24877360402925 39.0 37.0 39.0 34.0 39.0 11 37.15635885921005 39.0 37.0 39.0 34.0 39.0 12 36.93966646395659 39.0 35.0 39.0 33.0 39.0 13 36.70561506915532 39.0 35.0 39.0 32.0 39.0 14 37.88622351125041 40.0 37.0 41.0 33.0 41.0 15 37.83869657419969 40.0 36.0 41.0 33.0 41.0 16 38.0603265191561 40.0 37.0 41.0 33.0 41.0 17 37.833517331711654 40.0 36.0 41.0 33.0 41.0 18 37.92009870421481 40.0 36.0 41.0 33.0 41.0 19 37.89188302069202 40.0 36.0 41.0 33.0 41.0 20 37.37507757558747 40.0 35.0 41.0 31.0 41.0 21 37.66590416491245 40.0 36.0 41.0 32.0 41.0 22 37.683663906690995 40.0 36.0 41.0 33.0 41.0 23 37.159895370413686 39.0 35.0 41.0 31.0 41.0 24 37.341249161871794 39.0 35.0 41.0 31.0 41.0 25 37.51908047590089 39.0 35.0 41.0 33.0 41.0 26 37.416946562504876 39.0 35.0 41.0 32.0 41.0 27 37.06857993793953 39.0 35.0 41.0 31.0 41.0 28 37.12244390388424 39.0 35.0 41.0 31.0 41.0 29 37.097787341535295 39.0 35.0 41.0 31.0 41.0 30 37.06737381297656 39.0 35.0 41.0 31.0 41.0 31 36.82818371770283 39.0 35.0 41.0 30.0 41.0 32 36.41133305265784 39.0 35.0 41.0 29.0 41.0 33 36.16668303940372 39.0 35.0 41.0 28.0 41.0 34 36.15294007578238 39.0 35.0 41.0 29.0 41.0 35 36.09976532410223 39.0 35.0 41.0 29.0 41.0 36 36.09371676724205 39.0 35.0 41.0 29.0 41.0 37 35.79443872698071 39.0 35.0 41.0 27.0 41.0 38 35.76083173504234 39.0 35.0 41.0 26.0 41.0 39 35.73982941167298 39.0 35.0 41.0 27.0 41.0 40 35.72613868487939 39.0 35.0 41.0 26.0 41.0 41 35.62491228890864 38.0 35.0 41.0 26.0 41.0 42 35.594229000015595 39.0 35.0 41.0 26.0 41.0 43 35.4875192964401 39.0 35.0 41.0 26.0 41.0 44 35.62355802965804 39.0 35.0 41.0 26.0 41.0 45 35.48855311783693 39.0 35.0 41.0 26.0 41.0 46 35.374778968049775 38.0 35.0 40.0 26.0 41.0 47 35.200983923531524 38.0 35.0 40.0 25.0 41.0 48 35.28726045126382 38.0 35.0 40.0 26.0 41.0 49 35.31247134771016 38.0 35.0 40.0 26.0 41.0 50 35.14095133398824 38.0 35.0 40.0 26.0 41.0 51 34.732078090159206 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 8.0 11 5.0 12 9.0 13 18.0 14 23.0 15 26.0 16 47.0 17 93.0 18 244.0 19 687.0 20 2188.0 21 5282.0 22 9428.0 23 12752.0 24 15978.0 25 18274.0 26 17251.0 27 15096.0 28 13720.0 29 15495.0 30 19951.0 31 26550.0 32 35650.0 33 50557.0 34 78071.0 35 109455.0 36 105833.0 37 158221.0 38 241318.0 39 330001.0 40 388.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.94651572562412 3.3269401693408804 43.63848996585114 13.088054139183857 2 15.850602672654409 24.290280831423182 42.11520169652742 17.74391479939499 3 17.467995197330463 24.429527061795387 40.012396500912196 18.090081239961954 4 15.853331462163384 4.141132993404126 59.278586019241864 20.726949525190623 5 27.87840513948013 16.167999875255337 35.36542389795886 20.58817108730567 6 17.07185292604201 22.439771717266222 44.13606524145889 16.352310115232882 7 68.4204986667914 1.9925620994526827 24.938407322511733 4.648531911244172 8 67.46643588903962 18.180053328343547 8.328187615973553 6.025323166643277 9 63.28959473577521 4.555986964182688 8.934758541111162 23.219659758930938 10 45.2721772621665 22.47080195225398 16.456627839890224 15.800392945689293 11 37.95551293446227 20.34593254432334 23.046888400305622 18.651666120908764 12 24.725951567884486 17.2047839578363 26.65536168155806 31.41390279272115 13 28.082518594751367 21.050428030125836 32.98716689276637 17.879886482356426 14 19.95267499337294 33.07518984578441 24.672077466435887 22.30005769440676 15 16.293914019740843 20.308431179928586 36.65044986044191 26.747204939888665 16 16.999734917590555 22.110445806240353 27.832483510314827 33.05733576585427 17 17.925652180692644 27.57543153856949 30.379379707161903 24.11953657357596 18 17.68146450234676 21.444309304392572 29.615474575478316 31.258751617782355 19 18.642622132821877 24.166705649373938 26.91568820071416 30.274984017090016 20 27.749684240071105 23.077606773635214 31.701361276137906 17.471347710155776 21 22.03676848949806 34.39600193354228 24.705446663859913 18.86178291309975 22 19.069794639098095 21.634311019631692 34.312812836225845 24.983081505044364 23 25.48977873415353 27.498479674416426 25.70777003321327 21.303971558216777 24 21.349347429480282 27.020551683273297 25.030874304158672 26.59922658308774 25 18.152687467839264 35.72367497777986 23.48263710218147 22.641000452199407 26 18.14403330682509 22.283606991938377 32.533408180131296 27.038951521105236 27 27.330620136907267 24.568851257582136 24.11088241256179 23.989646192948808 28 15.751352699942306 30.47504327080507 30.43652835602127 23.337075673231354 29 21.967925028457376 20.43114874241786 30.335797040432865 27.265129188691894 30 21.622694172864918 33.10559635745583 25.847094229000017 19.424615240679234 31 23.776566715005224 25.827758806193575 20.35973242269729 30.035942056103913 32 32.03567697369447 26.962311518610342 20.60727261386849 20.3947388938267 33 26.28970388735557 25.828070667851744 21.195911493661413 26.68631395113128 34 22.25974957508849 25.31170572733935 22.52950990940419 29.899034788167967 35 26.305141039434908 21.351296564843835 23.70133008997209 28.64223230574917 36 18.392820944628962 31.512607007531457 24.782242597183888 25.31232945065569 37 25.347102025541467 24.125150083422994 26.05916015655455 24.468587734480984 38 20.396454132946626 29.311877251251346 20.916951240429746 29.374717375372285 39 24.241708378163445 30.382030531256333 24.298623130779188 21.07763795980103 40 19.51240429745365 25.404640501473548 25.20364566278399 29.87930953828882 41 18.55569069560743 27.46308337621431 24.555129344622724 29.426096583555534 42 21.691381703076516 20.395362617143036 27.912943818122283 30.00031186165817 43 21.713445915391933 24.281158877921754 26.177511655829473 27.827883550856843 44 23.302692925418285 22.148181066878735 28.65696776909763 25.892158238605354 45 20.761410238418236 22.64201400258845 25.09956183437027 31.497013924623037 46 28.701174159143005 25.66902122218584 23.57978200870094 22.050022609970217 47 16.390435202943973 27.580889117587436 33.42525455707848 22.603421122390106 48 20.602750619825045 27.264973257862813 25.7148648859366 26.417411236375543 49 21.466607412951618 19.50242472439226 33.33395705664967 25.697010806006453 50 22.200106032963777 22.389717921130188 28.832234020988288 26.577942024917746 51 19.295114687124794 21.595952035676973 27.274640969266034 31.8342923079322 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 226.0 1 592.5 2 959.0 3 1582.5 4 2206.0 5 1654.5 6 1103.0 7 1210.5 8 1318.0 9 1428.5 10 1539.0 11 1591.0 12 1643.0 13 1690.0 14 1737.0 15 1673.0 16 1609.0 17 1777.5 18 1946.0 19 1986.5 20 2027.0 21 2392.0 22 2757.0 23 3459.5 24 4162.0 25 4475.5 26 6645.5 27 8502.0 28 9437.5 29 10373.0 30 12594.0 31 14815.0 32 16691.5 33 18568.0 34 20634.0 35 22700.0 36 25532.0 37 28364.0 38 31188.0 39 34012.0 40 39161.5 41 44311.0 42 50168.0 43 56025.0 44 71544.0 45 87063.0 46 153726.0 47 220389.0 48 182328.0 49 144267.0 50 136795.0 51 129323.0 52 113146.0 53 96969.0 54 90704.0 55 84439.0 56 75821.0 57 67203.0 58 60124.0 59 53045.0 60 47707.5 61 42370.0 62 36824.5 63 31279.0 64 25848.5 65 20418.0 66 17334.5 67 14251.0 68 11949.0 69 9647.0 70 8083.0 71 6519.0 72 5655.0 73 4791.0 74 3551.0 75 1704.5 76 1098.0 77 873.0 78 648.0 79 553.0 80 458.0 81 351.0 82 244.0 83 213.5 84 183.0 85 98.5 86 14.0 87 7.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1282620.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.81393177909737 #Duplication Level Percentage of deduplicated Percentage of total 1 69.27575925545774 15.111766863437284 2 11.955843485819633 5.216079083224703 3 5.07326944198172 3.3200386051310593 4 2.762201157595105 2.4101787044769365 5 1.6919232912157842 1.8453749625023503 6 1.1839885150643088 1.5496466816908578 7 0.8582501989834653 1.310526790301544 8 0.648372881145707 1.1314849437383407 9 0.5430248745006346 1.0660956810038777 >10 4.27731082156891 20.795709455497004 >50 1.454934642834837 22.24095297990263 >100 0.2574530848704448 8.400027198681045 >500 0.006129835354056948 0.9876092430906624 >1k 0.008293306655488813 3.7279967892262693 >5k 0.0018028927511932202 2.7850643580243846 >10k+ 0.0014423142009545762 8.101447660071045 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGC 35133 2.73915890910792 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCG 28803 2.245637835056369 No Hit GAATCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTC 26364 2.055480188988165 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGAGAACTT 12698 0.9900048338557016 No Hit GCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGC 7645 0.5960455941744243 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTC 7494 0.5842728165785657 No Hit GAACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCT 7085 0.5523849620308431 No Hit GAATGACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCT 6625 0.516520871341473 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCGAGAACTTCGTA 6559 0.5113751539816938 No Hit GAATAATACGGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGC 4973 0.38772200651790867 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCG 4209 0.3281564298077373 No Hit CTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGCT 4031 0.31427858601924186 No Hit GAATATGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTC 3703 0.28870593004943007 No Hit TCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGC 3176 0.24761815658573857 No Hit CCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGC 3013 0.2349097940153748 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCGAGAACTTCGT 2497 0.19467964011164646 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATG 2088 0.16279178556392385 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTAT 1712 0.1334767896960908 No Hit GAATGCTACGGCTGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGC 1707 0.13308696262338027 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCCATCGAATGC 1543 0.12030063463847437 No Hit GAATAATACGGCGACCACCTGTCTCTTATACACATCTGACGCCGAGAACTT 1521 0.11858539551854796 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCGAGAACT 1434 0.11180240445338448 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCCCGAGAACTT 1385 0.10798209914082114 No Hit TGTCTCTTATACACATCTGACGCCGAGAACTTCGTATGCCGTCTTCTGCTT 1356 0.10572110211909996 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCACCGATGAATGATACGGCGACCACCCCGAGAACAT 1319 0.10283638178104193 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3389624362632735E-4 0.0 0.0 0.3277666027350267 0.0 2 2.3389624362632735E-4 0.0 0.0 1.4719870265550201 0.0 3 2.3389624362632735E-4 0.0 0.0 1.9175593706631737 0.0 4 2.3389624362632735E-4 0.0 0.0 3.000343047823985 0.0 5 2.3389624362632735E-4 0.0 0.0 5.979323572063433 0.0 6 2.3389624362632735E-4 0.0 0.0 6.627683959395612 0.0 7 2.3389624362632735E-4 0.0 0.0 7.7442266610531565 0.0 8 2.3389624362632735E-4 0.0 0.0 9.229467808080335 0.0 9 2.3389624362632735E-4 0.0 0.0 9.623894840248866 0.0 10 2.3389624362632735E-4 0.0 0.0 13.102321810045064 0.0 11 2.3389624362632735E-4 0.0 0.0 14.391012147011585 0.0 12 2.3389624362632735E-4 0.0 0.0 19.031357689728836 0.0 13 2.3389624362632735E-4 0.0 0.0 19.644945502175236 0.0 14 2.3389624362632735E-4 0.0 0.0 19.95641733327096 0.0 15 2.3389624362632735E-4 0.0 0.0 20.838440067985843 0.0 16 2.3389624362632735E-4 0.0 0.0 21.577474232430493 0.0 17 2.3389624362632735E-4 0.0 0.0 22.36508085013488 0.0 18 2.3389624362632735E-4 0.0 0.0 23.094915095663563 0.0 19 2.3389624362632735E-4 0.0 0.0 24.92226848170152 0.0 20 2.3389624362632735E-4 0.0 0.0 25.617953875660756 0.0 21 2.3389624362632735E-4 0.0 0.0 26.361587999563394 0.0 22 2.3389624362632735E-4 0.0 0.0 27.138669286304594 0.0 23 2.3389624362632735E-4 0.0 0.0 27.81899549359904 0.0 24 2.3389624362632735E-4 0.0 0.0 28.39461414916343 0.0 25 2.3389624362632735E-4 0.0 0.0 28.90099951661443 0.0 26 2.3389624362632735E-4 0.0 0.0 29.363724251921848 0.0 27 2.3389624362632735E-4 0.0 0.0 29.85100809281003 0.0 28 2.3389624362632735E-4 0.0 0.0 30.318488718404517 0.0 29 2.3389624362632735E-4 0.0 0.0 30.795948917060393 0.0 30 2.3389624362632735E-4 0.0 0.0 31.321669707317835 0.0 31 2.3389624362632735E-4 0.0 0.0 31.810512856496857 0.0 32 2.3389624362632735E-4 0.0 0.0 32.28851881305453 0.0 33 2.3389624362632735E-4 0.0 0.0 32.763640049274144 0.0 34 2.3389624362632735E-4 0.0 0.0 33.234551153108484 0.0 35 3.118616581684365E-4 0.0 0.0 33.70631987650278 0.0 36 3.118616581684365E-4 0.0 0.0 34.16054638162511 0.0 37 3.118616581684365E-4 0.0 0.0 34.60931530772949 0.0 38 3.898270727105456E-4 0.0 0.0 35.07671796790944 0.0 39 3.898270727105456E-4 0.0 0.0 35.55261885827447 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGTTAG 40 6.8157533E-9 45.0 1 TCGCACA 20 7.0335943E-4 45.0 24 ACGTTAC 25 3.8910595E-5 45.0 13 CGTGCCA 25 3.8910595E-5 45.0 31 ACGCAAT 20 7.0335943E-4 45.0 35 TCCGAAT 20 7.0335943E-4 45.0 39 TTCGTAG 45 3.8562575E-10 45.0 1 CGCGATA 20 7.0335943E-4 45.0 29 TACGGGT 95 0.0 45.0 4 TAACCGA 20 7.0335943E-4 45.0 41 TGATTCG 20 7.0335943E-4 45.0 1 AACGCGT 20 7.0335943E-4 45.0 24 GTATCGT 20 7.0335943E-4 45.0 9 CGAGCGT 25 3.8910595E-5 45.0 39 CGTAATC 25 3.8910595E-5 45.0 43 CCGCGTA 90 0.0 45.0 40 CACGTCG 20 7.0335943E-4 45.0 32 GCGTCGA 20 7.0335943E-4 45.0 21 TTATTCG 20 7.0335943E-4 45.0 1 AGTACGC 25 3.8910595E-5 45.0 38 >>END_MODULE