##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935319.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1020615 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.39951695791263 33.0 31.0 34.0 31.0 34.0 2 32.53954625397432 34.0 31.0 34.0 31.0 34.0 3 32.60110227656854 34.0 31.0 34.0 31.0 34.0 4 36.02122837700798 37.0 35.0 37.0 35.0 37.0 5 31.64230292519706 37.0 35.0 37.0 0.0 37.0 6 33.40125610538744 37.0 35.0 37.0 17.0 37.0 7 35.219772392136115 37.0 35.0 37.0 32.0 37.0 8 35.77943396873454 37.0 35.0 37.0 35.0 37.0 9 37.823314374176356 39.0 38.0 39.0 35.0 39.0 10 37.59691852461506 39.0 37.0 39.0 35.0 39.0 11 37.523760673711436 39.0 37.0 39.0 35.0 39.0 12 37.28544358058622 39.0 37.0 39.0 35.0 39.0 13 37.19030584500522 39.0 37.0 39.0 34.0 39.0 14 38.40336561778928 40.0 38.0 41.0 34.0 41.0 15 38.505527549565706 40.0 38.0 41.0 34.0 41.0 16 38.570371785639054 40.0 38.0 41.0 35.0 41.0 17 38.56306932584765 40.0 38.0 41.0 35.0 41.0 18 38.54005379109655 40.0 38.0 41.0 35.0 41.0 19 38.545722921963716 40.0 38.0 41.0 34.0 41.0 20 38.46630805935637 40.0 37.0 41.0 34.0 41.0 21 38.405201765602115 40.0 37.0 41.0 34.0 41.0 22 38.37059322075415 40.0 37.0 41.0 34.0 41.0 23 38.3275044948389 40.0 37.0 41.0 34.0 41.0 24 38.315476452922994 40.0 37.0 41.0 34.0 41.0 25 38.23449586768762 40.0 37.0 41.0 34.0 41.0 26 38.164136329566 40.0 37.0 41.0 34.0 41.0 27 38.11860593857625 40.0 37.0 41.0 34.0 41.0 28 38.06299829024657 40.0 37.0 41.0 34.0 41.0 29 38.003068737966814 40.0 36.0 41.0 34.0 41.0 30 37.96529445481401 40.0 36.0 41.0 34.0 41.0 31 37.750710111060485 40.0 36.0 41.0 33.0 41.0 32 37.77592236053752 40.0 36.0 41.0 33.0 41.0 33 37.76174169495843 40.0 36.0 41.0 33.0 41.0 34 37.67284235485467 40.0 36.0 41.0 33.0 41.0 35 37.59021766287974 40.0 36.0 41.0 33.0 41.0 36 37.58132204602127 40.0 35.0 41.0 33.0 41.0 37 37.50736859638551 40.0 35.0 41.0 33.0 41.0 38 37.50985337272135 39.0 35.0 41.0 33.0 41.0 39 37.507363697378544 39.0 35.0 41.0 33.0 41.0 40 37.38104280262391 39.0 35.0 41.0 33.0 41.0 41 37.32978253308055 39.0 35.0 41.0 33.0 41.0 42 37.29566290912832 39.0 35.0 41.0 33.0 41.0 43 37.22284896851408 39.0 35.0 41.0 33.0 41.0 44 37.1577039334127 39.0 35.0 41.0 33.0 41.0 45 37.15583545215385 39.0 35.0 41.0 33.0 41.0 46 37.0851555189763 39.0 35.0 41.0 33.0 41.0 47 37.041826741719454 39.0 35.0 41.0 33.0 41.0 48 36.99598281428354 39.0 35.0 41.0 33.0 41.0 49 36.9572933966285 39.0 35.0 41.0 33.0 41.0 50 36.852892618666196 39.0 35.0 41.0 32.0 41.0 51 36.21406210961038 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 12.0 11 12.0 12 13.0 13 19.0 14 22.0 15 30.0 16 49.0 17 69.0 18 133.0 19 221.0 20 373.0 21 634.0 22 981.0 23 1371.0 24 2169.0 25 3090.0 26 4381.0 27 5665.0 28 7151.0 29 9209.0 30 12067.0 31 16370.0 32 22755.0 33 35120.0 34 59798.0 35 88853.0 36 86355.0 37 136349.0 38 214046.0 39 312938.0 40 353.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.550702272649335 4.491311611136423 55.484389314286 16.47359680192825 2 19.470907247101014 4.500227803824164 54.28736595092175 21.741498998153077 3 21.748651548331154 4.785643949971341 50.252151888812136 23.21355261288537 4 19.605629938811404 5.465822077864817 49.77802599413099 25.150521989192793 5 16.760580630306237 17.731857752433584 41.98321600211637 23.52434561514381 6 21.374759336282537 7.122274314996351 51.23508864753114 20.267877701189967 7 82.62351621326357 2.9920195176437736 8.979977758508351 5.404486510584305 8 83.97456435580509 3.3500389471054213 7.304811314746501 5.370585382342999 9 78.5100160197528 5.594861921488514 9.448616765381656 6.446505293377032 10 38.95190644856288 28.134997036100785 16.79595146063893 16.117145054697414 11 30.91028448533482 25.076449003786934 23.916070212567913 20.097196298310333 12 27.532517158771917 22.59412217143585 29.646046746324522 20.22731392346771 13 23.59881052110737 24.625544402149686 31.521974495769705 20.25367058097324 14 20.3749699935823 26.872228999181868 31.196288512318553 21.55651249491728 15 17.588806748872006 24.624172680197724 35.88934123053257 21.8976793403977 16 19.314922865135237 24.223433909946454 34.31470240982153 22.14694081509678 17 19.994415132052733 23.16730598707642 29.905792095942154 26.932486784928695 18 22.078256737359336 23.42019272693425 31.121823606354994 23.37972692935142 19 25.222439411531283 23.74274334592378 28.356824071760656 22.677993170784283 20 27.024686096128313 24.96867085041862 27.54927176261372 20.457371290839347 21 26.03283314472156 24.47847621287165 27.969900501168414 21.51879014123837 22 23.631535887675568 23.54345174233183 27.31656893147759 25.50844343851501 23 23.047770216977018 25.85382342999074 26.768174091111728 24.33023226192051 24 23.48045051268108 23.374827922380135 28.348495759909465 24.79622580502932 25 22.005849414323716 25.23860613453653 27.08318023936548 25.672364211774273 26 20.629130475252666 28.798028639594754 26.987747583564815 23.58509330158777 27 22.04190610563239 27.420525859408297 27.5933628253553 22.944205209604014 28 19.690186799135816 28.340167448058278 29.40374186152467 22.565903891281238 29 21.677811907526344 26.175590207864868 28.9862484874316 23.160349397177193 30 22.756769202882577 25.574873973045666 28.171543628106583 23.496813195965178 31 23.920773259260347 28.506635704942607 24.461133728193296 23.11145730760375 32 24.80935514371237 27.79961101884648 24.92869495353292 22.46233888390823 33 24.28849272252514 26.935426189111467 25.36970356108817 23.40637752727522 34 22.557477599290625 27.49557864620841 26.710463788989973 23.23647996551099 35 22.600490880498523 26.18382053957663 26.31589776752252 24.899790812402326 36 23.867080142855045 27.503906958059606 26.42426380172739 22.204749097357965 37 22.82378761824978 27.606786104456628 27.42571880679786 22.14370747049573 38 23.30712364603695 28.234642837896757 24.676396094511645 23.78183742155465 39 24.815723852775044 24.903416077561076 25.857154754731216 24.423705314932665 40 24.5612694306864 25.08634499786893 26.947085825703134 23.405299745741537 41 21.73248482532591 26.519794437667482 27.194191737334844 24.553528999671766 42 24.536088534853988 25.649632819427502 25.90349936067959 23.91077928503892 43 24.555488602460283 24.232448082773622 27.41866423675921 23.79339907800689 44 22.643700121985276 25.7288007720835 27.418762216898635 24.208736889032593 45 22.817320929047682 25.087422779402612 25.379109654473037 26.716146637076665 46 22.677013369390025 26.50940854288836 26.955610097833173 23.857967989888447 47 21.155871704805435 27.066817556081386 28.565815709155757 23.211495029957426 48 22.645365784355512 25.25006981084934 28.535049945376073 23.569514459419075 49 23.765082817712848 23.072951112809434 29.2717626137182 23.89020345575952 50 22.675837607716918 24.251946130519343 27.29217187676058 25.78004438500316 51 21.41787059762986 24.454667038991197 26.141885039902412 27.98557732347653 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 226.0 1 548.0 2 870.0 3 1289.0 4 1708.0 5 1365.5 6 1023.0 7 1135.0 8 1247.0 9 1307.0 10 1367.0 11 1381.0 12 1395.0 13 1396.5 14 1398.0 15 1410.0 16 1422.0 17 1540.5 18 1659.0 19 2018.5 20 2378.0 21 3236.5 22 4095.0 23 4279.0 24 4463.0 25 5026.0 26 7488.5 27 9388.0 28 10181.0 29 10974.0 30 13168.0 31 15362.0 32 16930.5 33 18499.0 34 23093.5 35 27688.0 36 29112.5 37 30537.0 38 33095.5 39 35654.0 40 43376.0 41 51098.0 42 56143.0 43 61188.0 44 67666.0 45 74144.0 46 82668.0 47 91192.0 48 100150.0 49 109108.0 50 102956.0 51 96804.0 52 83544.5 53 70285.0 54 64121.5 55 57958.0 56 53420.0 57 48882.0 58 47673.0 59 46464.0 60 43174.0 61 39884.0 62 35754.5 63 31625.0 64 27027.5 65 22430.0 66 19008.0 67 15586.0 68 12897.0 69 10208.0 70 8401.5 71 6595.0 72 5392.0 73 4189.0 74 3546.0 75 2284.0 76 1665.0 77 1272.0 78 879.0 79 599.0 80 319.0 81 241.5 82 164.0 83 110.0 84 56.0 85 37.5 86 19.0 87 22.5 88 26.0 89 13.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1020615.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.213635989566832 #Duplication Level Percentage of deduplicated Percentage of total 1 67.8219188171887 16.422152543533603 2 12.42796166625782 6.018522797581146 3 5.291717533609976 3.84395166355321 4 2.933779902508677 2.8414991453140788 5 1.7925436497037663 2.17019997146683 6 1.2667701718240112 1.8403867093792583 7 0.9445069396176188 1.6008963057864563 8 0.7195033566430231 1.3937433896820512 9 0.5866120089977205 1.2783608687681378 >10 4.271483393742604 22.184184140660754 >50 1.660227777928161 28.658152972725254 >100 0.2764320124523816 9.591003468658705 >500 0.004498154048781353 0.7288505175586049 >1k 0.002044615476718797 1.4280955053318511 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 3554 0.3482214155190743 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 3311 0.3244122416386198 Illumina Single End Adapter 2 (95% over 21bp) CTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGCT 3114 0.30511015417174936 Illumina Single End Adapter 2 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTGC 2999 0.2938424381377895 Illumina Single End Adapter 2 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCATAGCAGGTCGTATGCCGTCTTCTG 1445 0.141581301470192 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3200031353644616 0.0 2 0.0 0.0 0.0 1.3652552627582388 0.0 3 0.0 0.0 0.0 1.9400067606296203 0.0 4 0.0 0.0 0.0 2.589223164464563 0.0 5 0.0 0.0 0.0 3.7126634431200793 0.0 6 0.0 0.0 0.0 4.5460825090754104 0.0 7 0.0 0.0 0.0 5.2669223948305675 0.0 8 0.0 0.0 0.0 6.435237577343073 0.0 9 0.0 0.0 0.0 7.033014407979502 0.0 10 0.0 0.0 0.0 8.050930076473499 0.0 11 0.0 0.0 0.0 9.722569235216021 0.0 12 0.0 0.0 0.0 11.184334935308613 0.0 13 0.0 0.0 0.0 11.655129505249286 0.0 14 0.0 0.0 0.0 11.826888689662605 0.0 15 0.0 0.0 0.0 12.104858345213426 0.0 16 0.0 0.0 0.0 12.799635513881336 0.0 17 0.0 0.0 0.0 13.799816777139274 0.0 18 0.0 0.0 0.0 14.971365304252828 0.0 19 0.0 0.0 0.0 15.664084889992798 0.0 20 0.0 0.0 0.0 16.419021864268114 0.0 21 0.0 0.0 0.0 17.400488920895736 0.0 22 0.0 0.0 0.0 18.366573095633516 0.0 23 0.0 0.0 0.0 19.270047961278248 0.0 24 0.0 0.0 0.0 19.956496818094973 0.0 25 0.0 0.0 0.0 20.55319586719772 0.0 26 0.0 0.0 0.0 21.074548189082073 0.0 27 0.0 0.0 0.0 21.62294302944793 0.0 28 0.0 0.0 0.0 22.196028864949074 0.0 29 0.0 0.0 0.0 22.760492448180752 0.0 30 0.0 0.0 0.0 23.435085708126962 0.0 31 0.0 0.0 0.0 24.0568676729227 0.0 32 0.0 0.0 0.0 24.662482914713188 0.0 33 9.79801394257384E-5 0.0 0.0 25.265550672878607 0.0 34 9.79801394257384E-5 0.0 0.0 25.822469785374505 0.0 35 9.79801394257384E-5 0.0 0.0 26.412604165135726 0.0 36 9.79801394257384E-5 0.0 0.0 27.00802947242594 0.0 37 1.959602788514768E-4 0.0 0.0 27.6062962037595 0.0 38 1.959602788514768E-4 0.0 0.0 28.206424557742146 0.0 39 1.959602788514768E-4 0.0 0.0 28.815175163994258 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGATT 30 2.1652613E-6 45.000004 28 TATTACG 30 2.1652613E-6 45.000004 1 TCGTAAT 30 2.1652613E-6 45.000004 39 ACCCGTG 30 2.1652613E-6 45.000004 18 AGTCGAT 30 2.1652613E-6 45.000004 27 AACCGCA 20 7.032916E-4 45.0 10 TACCCGA 20 7.032916E-4 45.0 40 AAATCGT 25 3.8904982E-5 45.0 38 CGAACAG 20 7.032916E-4 45.0 33 AATTTCG 25 3.8904982E-5 45.0 39 CTCCGTA 20 7.032916E-4 45.0 22 CGTATCC 20 7.032916E-4 45.0 27 GTCGACA 20 7.032916E-4 45.0 30 CGACGTA 20 7.032916E-4 45.0 26 GCGGTAT 25 3.8904982E-5 45.0 39 GCGAAAT 20 7.032916E-4 45.0 41 GTTTACG 40 6.8139343E-9 45.0 1 CGTTGTA 20 7.032916E-4 45.0 31 GGCGTAA 25 3.8904982E-5 45.0 35 CGTCTTA 25 3.8904982E-5 45.0 13 >>END_MODULE