##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935318.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1913734 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31782421172431 33.0 31.0 34.0 30.0 34.0 2 32.47170505409843 34.0 31.0 34.0 31.0 34.0 3 32.53313051866142 34.0 31.0 34.0 30.0 34.0 4 35.96834408543716 37.0 35.0 37.0 35.0 37.0 5 31.738363325310623 37.0 35.0 37.0 0.0 37.0 6 33.4509095830455 37.0 35.0 37.0 17.0 37.0 7 35.205838951494826 37.0 35.0 37.0 32.0 37.0 8 35.757047217638394 37.0 35.0 37.0 35.0 37.0 9 37.787695677664715 39.0 38.0 39.0 35.0 39.0 10 37.5422111954953 39.0 37.0 39.0 35.0 39.0 11 37.42531198170697 39.0 37.0 39.0 35.0 39.0 12 37.063927379667184 39.0 35.0 39.0 34.0 39.0 13 36.890549574810294 39.0 35.0 39.0 33.0 39.0 14 37.68343928675563 40.0 37.0 41.0 33.0 41.0 15 37.89020104152406 40.0 37.0 41.0 33.0 41.0 16 38.09111454360951 40.0 37.0 41.0 33.0 41.0 17 38.16502084406715 40.0 37.0 41.0 33.0 41.0 18 38.16735293410683 40.0 37.0 41.0 34.0 41.0 19 38.17906929594186 40.0 37.0 41.0 34.0 41.0 20 38.06968157539136 40.0 36.0 41.0 33.0 41.0 21 38.02035601603985 40.0 36.0 41.0 33.0 41.0 22 38.06817143866389 40.0 36.0 41.0 34.0 41.0 23 38.05581862474095 40.0 36.0 41.0 34.0 41.0 24 38.00720476304439 40.0 36.0 41.0 34.0 41.0 25 37.91694770537598 40.0 36.0 41.0 34.0 41.0 26 37.8874974264971 40.0 36.0 41.0 34.0 41.0 27 37.83471161613892 40.0 35.0 41.0 34.0 41.0 28 37.806947569515934 40.0 35.0 41.0 34.0 41.0 29 37.7212851942851 40.0 35.0 41.0 33.0 41.0 30 37.66235223913041 40.0 35.0 41.0 33.0 41.0 31 37.41684581033728 40.0 35.0 41.0 33.0 41.0 32 37.45128790103536 39.0 35.0 41.0 33.0 41.0 33 37.47658556518304 39.0 35.0 41.0 33.0 41.0 34 37.39465359344611 39.0 35.0 41.0 33.0 41.0 35 37.30737239344653 39.0 35.0 41.0 32.0 41.0 36 37.30070375506732 39.0 35.0 41.0 32.0 41.0 37 37.26471390485825 39.0 35.0 41.0 32.0 41.0 38 37.22870733341206 39.0 35.0 41.0 32.0 41.0 39 37.221932619684864 39.0 35.0 41.0 33.0 41.0 40 37.117199673517845 39.0 35.0 41.0 32.0 41.0 41 36.998567198994216 39.0 35.0 41.0 32.0 41.0 42 37.02422593735597 39.0 35.0 41.0 32.0 41.0 43 37.006977458727285 39.0 35.0 41.0 32.0 41.0 44 36.98855483572952 39.0 35.0 41.0 32.0 41.0 45 36.98036456477232 39.0 35.0 41.0 32.0 41.0 46 36.9186036303896 39.0 35.0 41.0 32.0 41.0 47 36.85367297649517 39.0 35.0 41.0 32.0 41.0 48 36.79782874735987 38.0 35.0 41.0 32.0 41.0 49 36.77779409259594 38.0 35.0 40.0 32.0 41.0 50 36.69259364154057 38.0 35.0 40.0 32.0 41.0 51 36.0477689166833 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 14.0 10 22.0 11 19.0 12 26.0 13 29.0 14 37.0 15 67.0 16 85.0 17 208.0 18 309.0 19 562.0 20 905.0 21 1464.0 22 2290.0 23 3369.0 24 4873.0 25 7027.0 26 9641.0 27 12504.0 28 15702.0 29 20435.0 30 26822.0 31 36540.0 32 51519.0 33 82537.0 34 145461.0 35 153897.0 36 155595.0 37 242341.0 38 383581.0 39 555257.0 40 590.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.54292707345953 4.880406576880591 54.947082509899495 16.629583839760382 2 19.518491075562224 4.739791423468465 53.910156792950325 21.831560708018984 3 21.183090230930734 4.372603507070471 51.28016746318976 23.16413879880903 4 19.35425717471707 5.167071285769078 50.07373020492921 25.40494133458464 5 15.965071425809437 17.40409064164612 43.66547284000807 22.965365092536373 6 21.361171406266493 6.484809278614478 52.85165022934222 19.30236908577681 7 82.72403583779145 2.932643721645746 9.068971967891045 5.27434847267175 8 84.97251969186941 3.0356883454022343 6.82712435479539 5.164667607932973 9 79.34070252187608 5.340919897958651 9.15607916251684 6.1622984176484294 10 42.58987926221722 23.272931347825768 17.714112828637628 16.423076561319387 11 32.71436887258104 23.448034052799397 23.646546489742043 20.191050584877523 12 29.657987996241904 20.25359846248225 29.299630983198295 20.78878255807756 13 27.502150246585995 21.355005450078224 31.04616420045837 20.09668010287741 14 20.869932811979094 23.52782570618487 34.57215057055996 21.03009091127607 15 19.1528185212783 22.37102962062648 37.08744266444553 21.388709193649692 16 25.096695779037216 21.97290741555514 30.322918441120866 22.60747836428678 17 25.55825417743532 22.14252346459853 27.882506137216563 24.416716220749592 18 26.38626893810739 21.054545720565134 30.13501353897668 22.4241718023508 19 26.34044229762339 23.988182265664925 27.63262814999368 22.038747286718007 20 24.37256170397767 28.055884464612113 28.02411411408273 19.547439717327485 21 24.206289902358428 24.930110454221953 30.69313708174699 20.170462561672625 22 23.11245972533278 21.93638196321955 31.23574122631463 23.715417085133044 23 21.796237094601445 23.190370239542172 30.955974027738442 24.05741863811794 24 22.524394717343164 25.82297226260285 28.575601415870754 23.077031604183233 25 24.27098018846924 24.295748520954323 25.937774006209853 25.495497284366586 26 21.06316760845551 24.492014041658873 26.165705369711777 28.27911298017384 27 20.712962198508254 23.283800151954242 29.65365092536371 26.34958672417379 28 18.908061412923637 23.745515311950356 28.454424700611476 28.89199857451454 29 20.834295675365542 25.440473963466186 26.982746818523367 26.7424835426449 30 24.03970457754317 23.342428989608795 28.321752134831694 24.296114298016338 31 24.216897437156888 24.259327576350735 26.940264425463518 24.583510561028856 32 25.422707649025412 23.95839756204363 26.27136268676838 24.347532102162578 33 25.207212705632028 23.064699691806698 27.430562450162878 24.2975251523984 34 20.923597532363434 22.71512132825147 30.48945151207012 25.87182962731498 35 20.60699135825564 25.487502442868237 28.13196609351143 25.773540105364695 36 23.90290395634921 24.232887120153585 27.15952164720907 24.704687276288137 37 22.070831160443404 26.820812087782315 27.25342184441516 23.85493490735912 38 21.932253907805368 26.15577713517134 27.798116143622885 24.1138528134004 39 21.88177667324717 24.03400890614892 28.960607900575525 25.123606520028385 40 24.36524616273735 21.831142677090966 30.119755410104016 23.68385575006767 41 21.532041548093936 21.846766583025644 28.67613785405913 27.945054014821284 42 20.022375105422174 21.77753021057263 31.414449448042415 26.785645235962786 43 20.364481166139075 22.00943286789073 31.111324771363208 26.514761194606983 44 22.038747286718007 21.959478171992554 28.627123727748998 27.37465081354044 45 20.715783907272378 21.72386549018829 27.186798165262253 30.373552437277073 46 21.22505008533056 21.734264009522743 29.833665493741556 27.207020411405136 47 18.619306549395056 24.12712529536498 31.7699324984559 25.483635656784067 48 19.292597612834385 24.84300325959616 30.327464527463064 25.536934600106388 49 22.43875063096543 21.91276321578652 31.002636730078475 24.645849423169572 50 20.882525993685643 22.1510930986229 28.98485369440058 27.981527213290875 51 19.84727240044855 23.149298700864385 27.725692285343733 29.277736613343336 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 304.0 1 831.5 2 1359.0 3 2389.5 4 3420.0 5 2475.0 6 1530.0 7 1567.5 8 1605.0 9 1819.5 10 2034.0 11 2015.5 12 1997.0 13 2014.5 14 2032.0 15 2181.0 16 2330.0 17 2277.0 18 2224.0 19 2496.5 20 2769.0 21 3508.5 22 4248.0 23 5077.0 24 5906.0 25 7974.0 26 11616.0 27 13190.0 28 16906.0 29 20622.0 30 23625.5 31 26629.0 32 30874.0 33 35119.0 34 40591.0 35 46063.0 36 50029.5 37 53996.0 38 57620.5 39 61245.0 40 70684.5 41 80124.0 42 88183.5 43 96243.0 44 108633.0 45 121023.0 46 141891.5 47 162760.0 48 184270.0 49 205780.0 50 203512.0 51 201244.0 52 176809.0 53 152374.0 54 142287.5 55 132201.0 56 121704.0 57 111207.0 58 103551.5 59 95896.0 60 82521.5 61 69147.0 62 62425.5 63 55704.0 64 49720.0 65 43736.0 66 38143.0 67 32550.0 68 25868.5 69 19187.0 70 16556.0 71 13925.0 72 11694.5 73 9464.0 74 7526.0 75 4743.0 76 3898.0 77 2947.5 78 1997.0 79 1243.5 80 490.0 81 389.0 82 288.0 83 227.0 84 166.0 85 113.5 86 61.0 87 38.5 88 16.0 89 8.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1913734.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.939556315259377 #Duplication Level Percentage of deduplicated Percentage of total 1 69.9555550580592 17.446605049356954 2 12.198063038440713 6.084285601685522 3 5.129338664679504 3.837702914634354 4 2.6675153241493943 2.6610659459376476 5 1.5360481978496199 1.9154180266611636 6 1.0258532695901152 1.5350595232881385 7 0.7424567559243339 1.2961579453213798 8 0.5490573809729662 1.095459797846729 9 0.4159728805840564 0.9336761172852065 >10 3.9047594958236425 23.228377537266773 >50 1.6584427609360706 28.942840767589967 >100 0.20703547894980223 7.787600527208806 >500 0.006301078025847337 1.0236945309177592 >1k 0.0029255005120005493 1.2696842857978328 >5k 6.751155027693575E-4 0.9423714292017595 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGC 5949 0.310858248847541 TruSeq Adapter, Index 14 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGC 5600 0.2926216496127466 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGC 5242 0.27391476558393174 TruSeq Adapter, Index 14 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTGCT 4685 0.24480936222066388 Illumina Paired End PCR Primer 2 (95% over 21bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 2541 0.13277707351178378 No Hit TCCTGTCTCTTATACACATCTGACGCCCCATGTTTCGTATGCCGTCTTCTG 2300 0.1201838918052352 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0901546400910472E-4 0.0 0.0 0.2546330890290918 0.0 2 2.0901546400910472E-4 0.0 0.0 1.1954639464000745 0.0 3 2.0901546400910472E-4 0.0 0.0 1.7186819066808658 0.0 4 2.0901546400910472E-4 0.0 0.0 2.318922065449012 0.0 5 2.0901546400910472E-4 0.0 0.0 3.385057693493453 0.0 6 2.0901546400910472E-4 0.0 0.0 4.211034553391433 0.0 7 2.0901546400910472E-4 0.0 0.0 4.944260801135372 0.0 8 2.0901546400910472E-4 0.0 0.0 6.116106000102418 0.0 9 2.0901546400910472E-4 0.0 0.0 6.711800072528366 0.0 10 2.0901546400910472E-4 0.0 0.0 7.717582485340178 0.0 11 2.0901546400910472E-4 0.0 0.0 9.453142390739778 0.0 12 2.0901546400910472E-4 0.0 0.0 10.911809060193319 0.0 13 2.0901546400910472E-4 0.0 0.0 11.378279321995638 0.0 14 2.0901546400910472E-4 0.0 0.0 11.577680074660323 0.0 15 2.0901546400910472E-4 0.0 0.0 11.855304864730417 0.0 16 2.0901546400910472E-4 0.0 0.0 12.490032575060066 0.0 17 2.0901546400910472E-4 0.0 0.0 13.3539979955417 0.0 18 2.0901546400910472E-4 0.0 0.0 14.318813377407727 0.0 19 2.0901546400910472E-4 0.0 0.0 14.951868964025303 0.0 20 2.612693300113809E-4 0.0 0.0 15.660588148614176 0.0 21 2.612693300113809E-4 0.0 0.0 16.609936386143527 0.0 22 2.612693300113809E-4 0.0 0.0 17.584627748683985 0.0 23 3.135231960136571E-4 0.0 0.0 18.468449638246486 0.0 24 3.135231960136571E-4 0.0 0.0 19.17335429061719 0.0 25 3.135231960136571E-4 0.0 0.0 19.814195703269107 0.0 26 3.135231960136571E-4 0.0 0.0 20.38747286718008 0.0 27 3.6577706201593326E-4 0.0 0.0 21.094467674190874 0.0 28 4.1803092801820943E-4 0.0 0.0 21.72726199147844 0.0 29 4.1803092801820943E-4 0.0 0.0 22.448940134835876 0.0 30 4.1803092801820943E-4 0.0 0.0 23.20087326660863 0.0 31 4.1803092801820943E-4 0.0 0.0 23.806286558111 0.0 32 4.1803092801820943E-4 0.0 0.0 24.406944747807167 0.0 33 4.1803092801820943E-4 0.0 0.0 24.998458510952933 0.0 34 4.1803092801820943E-4 0.0 0.0 25.66981618135018 0.0 35 4.1803092801820943E-4 0.0 0.0 26.374250548926863 0.0 36 4.1803092801820943E-4 0.0 0.0 26.96654812006266 0.0 37 4.1803092801820943E-4 0.0 0.0 27.568512656408885 0.0 38 4.702847940204856E-4 0.0 0.0 28.365122843613584 0.0 39 4.702847940204856E-4 0.0 0.0 29.820602027240984 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAG 20 7.034462E-4 45.000004 31 TTTACGG 805 0.0 43.04348 2 CGTATGG 240 0.0 42.187496 2 TTACGGG 1305 0.0 41.551727 3 TACGGGT 180 0.0 41.25 4 TATGGGC 1190 0.0 40.65126 4 TACGGGA 775 0.0 40.64516 4 CGATAAC 90 0.0 40.0 16 TTTTACG 525 0.0 39.85714 1 CGAACGA 85 0.0 39.705883 22 ACATACG 255 0.0 39.705883 17 GCCGATT 330 0.0 39.545452 9 TTATGGG 4115 0.0 39.204132 3 TCTACGG 595 0.0 38.94958 2 CGTTTTT 1030 0.0 38.883495 1 GTACGGG 475 0.0 38.842106 3 TTGGGCA 2145 0.0 38.81119 5 CTACGGG 865 0.0 38.757225 3 TTTGGGC 4425 0.0 38.74576 4 TACGGGG 1390 0.0 38.687054 4 >>END_MODULE