##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935317.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 468737 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.246406833682855 33.0 31.0 34.0 30.0 34.0 2 32.40021589932094 34.0 31.0 34.0 30.0 34.0 3 32.47917275572443 34.0 31.0 34.0 30.0 34.0 4 35.9321111838835 37.0 35.0 37.0 35.0 37.0 5 31.564578857653654 37.0 35.0 37.0 0.0 37.0 6 33.305593541794224 37.0 35.0 37.0 17.0 37.0 7 35.19512434478183 37.0 35.0 37.0 32.0 37.0 8 35.709532211026655 37.0 35.0 37.0 35.0 37.0 9 37.748573293766015 39.0 38.0 39.0 35.0 39.0 10 37.50651644738947 39.0 37.0 39.0 35.0 39.0 11 37.396559264576936 39.0 37.0 39.0 35.0 39.0 12 37.01778609326765 39.0 35.0 39.0 34.0 39.0 13 36.784712962706166 39.0 35.0 39.0 33.0 39.0 14 37.89810917422776 40.0 36.0 41.0 33.0 41.0 15 38.057569596596814 40.0 36.0 41.0 33.0 41.0 16 38.181914378425425 40.0 36.0 41.0 34.0 41.0 17 38.18260773098774 40.0 36.0 41.0 34.0 41.0 18 38.193746173227204 40.0 36.0 41.0 34.0 41.0 19 38.21231735493464 40.0 36.0 41.0 34.0 41.0 20 38.08528876534176 40.0 36.0 41.0 34.0 41.0 21 38.03037310901422 40.0 36.0 41.0 34.0 41.0 22 37.98696283843605 40.0 36.0 41.0 34.0 41.0 23 37.92026232194173 40.0 36.0 41.0 34.0 41.0 24 37.90795904739758 40.0 35.0 41.0 34.0 41.0 25 37.84459088998735 40.0 35.0 41.0 34.0 41.0 26 37.803132673546145 40.0 35.0 41.0 34.0 41.0 27 37.69816336239725 40.0 35.0 41.0 33.0 41.0 28 37.71244429178836 39.0 36.0 41.0 34.0 41.0 29 37.67067673343474 39.0 36.0 41.0 33.0 41.0 30 37.625683485622 39.0 36.0 41.0 33.0 41.0 31 37.446704655275774 39.0 35.0 41.0 33.0 41.0 32 37.447848153655464 39.0 35.0 41.0 33.0 41.0 33 37.44396964609152 39.0 35.0 41.0 33.0 41.0 34 37.481114142898896 39.0 35.0 41.0 33.0 41.0 35 37.38526295129252 39.0 35.0 41.0 33.0 41.0 36 37.351292942524275 39.0 35.0 41.0 33.0 41.0 37 37.29151955147556 39.0 35.0 41.0 33.0 41.0 38 37.29709410607654 39.0 35.0 41.0 33.0 41.0 39 37.31767494351843 39.0 35.0 41.0 33.0 41.0 40 37.26324996746576 39.0 35.0 41.0 33.0 41.0 41 37.211203724049945 39.0 35.0 41.0 33.0 41.0 42 37.21558357885125 39.0 35.0 41.0 33.0 41.0 43 37.13624271179788 39.0 35.0 41.0 33.0 41.0 44 37.09445595291176 39.0 35.0 41.0 33.0 41.0 45 37.07680212997907 39.0 35.0 41.0 33.0 41.0 46 36.97787671978103 39.0 35.0 41.0 33.0 41.0 47 36.93758973582201 39.0 35.0 41.0 33.0 41.0 48 36.94465553178008 39.0 35.0 41.0 33.0 41.0 49 36.97342006284974 39.0 35.0 41.0 33.0 41.0 50 36.872100986267355 39.0 35.0 41.0 33.0 41.0 51 36.33442634142387 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 5.0 11 5.0 12 6.0 13 7.0 14 5.0 15 9.0 16 15.0 17 32.0 18 46.0 19 113.0 20 254.0 21 423.0 22 642.0 23 912.0 24 1292.0 25 1727.0 26 2225.0 27 2632.0 28 3271.0 29 4396.0 30 5863.0 31 8177.0 32 11577.0 33 18090.0 34 31769.0 35 52206.0 36 38379.0 37 57011.0 38 92911.0 39 134564.0 40 171.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.38011720858392 4.559699789007482 55.33529463217113 14.724888370237469 2 18.324561534506557 6.827282676639565 52.1435261137909 22.704629675062986 3 20.64142578887521 7.38260474423824 50.05408149986026 21.921887967026287 4 17.974685164601897 5.1122484463569124 52.39419973247258 24.51886665656861 5 16.3134124253046 17.081007046595424 43.057834137266745 23.54774639083324 6 19.93932631731653 8.363751954720877 53.354226357210976 18.342695370751617 7 81.38465706782269 2.042083300443532 11.177483322204136 5.395776309529651 8 81.50178031604077 4.4519634677868405 7.769602143632784 6.276654072539611 9 75.56070888365971 5.9071504916403015 10.077292810253939 8.454847814446055 10 39.4436539040016 27.170886872595933 17.438136950998107 15.947322272404355 11 33.97619560649149 23.390728702876025 25.3937709205802 17.23930477005229 12 29.60935449943145 20.469261014172126 28.66447496143893 21.256909524957493 13 22.890448161762354 29.87026840211035 29.933843498593028 17.305439937534267 14 16.60910062572402 32.46212694965407 28.88272101412946 22.046051410492453 15 14.63592590301171 24.480465591579073 40.93766867134448 19.94593983406473 16 16.23149015332692 24.295500461879477 35.31916618487553 24.153843199918075 17 16.64024815621553 23.07754668396137 29.385348286992492 30.896856872830607 18 19.61185056865577 21.99463665125646 34.21662894117597 24.1768838389118 19 22.928635887501947 25.416598220323976 28.947576146111786 22.70718974606229 20 24.728579139261463 25.612230312520666 29.533619065702087 20.12557148251578 21 22.547398647855836 30.04136648056373 26.559029903762664 20.852204967817777 22 20.013141697796417 26.29171582358551 27.05312360662802 26.642018871990047 23 18.789427760129882 27.637673151468732 27.548070666493153 26.024828421908236 24 20.363658085450904 25.00506680718612 30.624635989904785 24.00663911745819 25 17.999219178345214 28.87418744413178 27.116058685360873 26.01053469216213 26 16.66158208120972 30.005738825823435 27.124805594608492 26.207873498358353 27 19.26304089500082 29.988031668078264 28.256783654800028 22.49214378212089 28 17.699050853677008 25.847543505206545 32.71344058608558 23.739965055030858 29 17.172529584820488 24.457851631085237 30.832641758598108 27.536977025496174 30 19.328322705483032 27.987762860623334 27.627859545971408 25.056054887922226 31 23.923436809980863 27.120538809609652 24.542120634812274 24.413903745597214 32 21.218081781468072 27.648340113965826 25.659378286757818 25.47419981780828 33 20.27213554722584 27.29846374406117 25.920292189436722 26.50910851927627 34 18.361895903246385 24.629376388038494 28.87248073013225 28.136246978582875 35 16.70040982469914 25.649778020510432 28.730396789670966 28.919415365119463 36 21.305977552444123 26.034002009655733 28.210915716062523 24.44910472183762 37 19.145490968282854 27.9427482788856 30.078487510053613 22.83327324277793 38 18.96799271233122 27.591591873481292 27.381879390788438 26.05853602339905 39 18.239225834529808 25.672178641754336 30.747092719371416 25.34150280434444 40 21.82161851955361 22.617160582586823 31.00416651555136 24.557054382308202 41 16.318745906553143 23.5409195348351 31.5934095238908 28.54692503472096 42 19.81281614210101 22.610760405088566 31.12854329826747 26.44788015454295 43 21.500542948391104 24.560681149557215 28.224569428058803 25.714206473992878 44 20.478007923419742 24.92826467720705 27.829678476416415 26.764048922956796 45 18.85214949961279 26.949227391906334 25.04325453292571 29.155368575555162 46 21.208268175970744 26.24158109984917 27.896667000898155 24.653483723281926 47 17.132421805831417 24.44611797233843 32.63727847385634 25.78418174797381 48 19.095569583796458 22.39614111964705 32.85424449104722 25.654044805509272 49 20.85625841356667 19.759908008115428 33.12411864222368 26.259714936094227 50 19.667105434390713 22.348566466910018 30.58858165666461 27.395746442034657 51 17.630995632945552 22.82004620928154 28.025523907863043 31.523434249909865 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 135.0 1 217.0 2 299.0 3 483.0 4 667.0 5 546.5 6 426.0 7 476.0 8 526.0 9 830.5 10 1135.0 11 1136.0 12 1137.0 13 1214.0 14 1291.0 15 1266.5 16 1242.0 17 1074.5 18 907.0 19 999.5 20 1092.0 21 1235.0 22 1378.0 23 1519.0 24 1660.0 25 1844.5 26 3375.0 27 4721.0 28 5744.0 29 6767.0 30 6345.5 31 5924.0 32 7411.5 33 8899.0 34 10093.0 35 11287.0 36 11448.5 37 11610.0 38 12939.0 39 14268.0 40 19420.0 41 24572.0 42 28022.0 43 31472.0 44 35771.5 45 40071.0 46 49997.0 47 59923.0 48 61593.0 49 63263.0 50 58586.5 51 53910.0 52 44520.5 53 35131.0 54 29115.5 55 23100.0 56 19845.5 57 16591.0 58 14686.0 59 12781.0 60 11029.0 61 9277.0 62 8280.5 63 7284.0 64 6009.5 65 4735.0 66 3799.5 67 2864.0 68 2741.0 69 2618.0 70 1959.0 71 1300.0 72 1241.5 73 1183.0 74 828.5 75 494.0 76 514.0 77 339.5 78 165.0 79 110.0 80 55.0 81 49.5 82 44.0 83 27.0 84 10.0 85 5.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 468737.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.64949373818093 #Duplication Level Percentage of deduplicated Percentage of total 1 67.7297931196674 16.695051113915316 2 12.482416486551463 6.153704940452334 3 5.559965755730305 4.111510232411236 4 3.137669162251603 3.0936782546961714 5 1.9091350824079658 2.3529606629578343 6 1.2922394119725849 1.91118283761893 7 0.9304509442931085 1.6054601307526255 8 0.6834859059835242 1.347806524774064 9 0.5878319873544077 1.304078480225543 >10 3.971343197629328 20.12490086698132 >50 1.356535000510351 24.25555330218314 >100 0.3443511924372429 12.432040115646044 >500 0.00869573718275866 1.4684811522808805 >1k 0.006087016027931062 3.1435913851045676 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCTGC 2641 0.5634289590964656 TruSeq Adapter, Index 23 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCTGC 2487 0.5305747146054184 TruSeq Adapter, Index 23 (95% over 22bp) CTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCTGCT 2240 0.47787991986977774 TruSeq Adapter, Index 20 (96% over 25bp) CCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCTGC 2056 0.43862549788047456 TruSeq Adapter, Index 23 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGC 1894 0.4040645393898924 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCG 1875 0.40001109364099696 No Hit GAATCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTC 1473 0.3142487151643672 No Hit TCCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCTG 960 0.20480567994419047 TruSeq Adapter, Index 20 (95% over 23bp) AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 920 0.19627210994651584 No Hit TTTTTTGGGGGTTTTGTTTTGTTTTGTTTTTTTCCACATTTTACATGACTG 858 0.18304507645012022 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAGCCTTTT 680 0.14507068996046824 No Hit TTGTCGGGATGTGCGAGGGGAATAAATCCCTGTCTCTTATACACATCTGAC 628 0.13397704896349125 No Hit CTTTGTGGGCAACGACGCGCAATCGGGAGAAACAAGCGAGATAGGAATGTC 614 0.13099029946430515 No Hit TTCCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCT 582 0.12416344346616547 No Hit GCCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCTG 544 0.11605655196837458 TruSeq Adapter, Index 23 (95% over 21bp) TGCTGTCTCTTATACACATCTGACGCCAGCCTTTTCGTATGCCGTCTTCTG 533 0.11370982021901407 TruSeq Adapter, Index 20 (95% over 23bp) TGTCATGGGAGCTGGACGGTGGTGGCTCACGCCTTTAATCCCAGTTGGATT 532 0.11349648096907221 No Hit TCCGCTGGGTGATGGGCTGCGAACATGGACTGAGCTTGTGGTGTGCTTTGC 487 0.10389621472168828 No Hit GTTTTTGGGGTCTTTGGGATACCTCCAGTGCAACCACTTGGCTTATGCTAG 478 0.10197616147221149 No Hit TTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 476 0.10154948297232777 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.4962270953647781 0.0 2 0.0 0.0 0.0 2.126992321920395 0.0 3 0.0 0.0 0.0 2.9449350061975053 0.0 4 0.0 0.0 0.0 3.9512562481732827 0.0 5 0.0 0.0 0.0 5.7721067464271005 0.0 6 0.0 0.0 0.0 6.831549461638403 0.0 7 0.0 0.0 0.0 7.867311520106157 0.0 8 0.0 0.0 0.0 9.625440278877068 0.0 9 0.0 0.0 0.0 10.460236763899585 0.0 10 0.0 0.0 0.0 12.341675609136894 0.0 11 0.0 0.0 0.0 14.61757872751671 0.0 12 0.0 0.0 0.0 17.067353334599147 0.0 13 0.0 0.0 0.0 17.704170995675614 0.0 14 2.1333924994186505E-4 0.0 0.0 17.934364046362887 0.0 15 2.1333924994186505E-4 0.0 0.0 18.380243078741383 0.0 16 2.1333924994186505E-4 0.0 0.0 19.312962279487216 0.0 17 2.1333924994186505E-4 0.0 0.0 20.553743357149106 0.0 18 2.1333924994186505E-4 0.0 0.0 22.189628725703326 0.0 19 2.1333924994186505E-4 0.0 0.0 23.123841301198752 0.0 20 2.1333924994186505E-4 0.0 0.0 24.09133479968511 0.0 21 4.266784998837301E-4 0.0 0.0 25.197925489133564 0.0 22 4.266784998837301E-4 0.0 0.0 26.175872610867074 0.0 23 4.266784998837301E-4 0.0 0.0 27.171100211845875 0.0 24 4.266784998837301E-4 0.0 0.0 27.90754730264519 0.0 25 4.266784998837301E-4 0.0 0.0 28.602179900455905 0.0 26 4.266784998837301E-4 0.0 0.0 29.22278377853679 0.0 27 4.266784998837301E-4 0.0 0.0 29.76957227613779 0.0 28 4.266784998837301E-4 0.0 0.0 30.34153480523193 0.0 29 4.266784998837301E-4 0.0 0.0 31.01526015654834 0.0 30 4.266784998837301E-4 0.0 0.0 31.895497901808476 0.0 31 4.266784998837301E-4 0.0 0.0 32.55812961212791 0.0 32 4.266784998837301E-4 0.0 0.0 33.104064752729144 0.0 33 4.266784998837301E-4 0.0 0.0 33.649146536330605 0.0 34 4.266784998837301E-4 0.0 0.0 34.21812231592556 0.0 35 4.266784998837301E-4 0.0 0.0 34.8267791960097 0.0 36 4.266784998837301E-4 0.0 0.0 35.35052705461698 0.0 37 4.266784998837301E-4 0.0 0.0 35.937636670456996 0.0 38 4.266784998837301E-4 0.0 0.0 36.47845166905962 0.0 39 4.266784998837301E-4 0.0 0.0 37.064921267149806 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCTACG 40 6.7993824E-9 45.000004 1 ATCTCGA 20 7.029006E-4 45.000004 6 AATCCAT 20 7.029006E-4 45.000004 36 ATCTCAT 20 7.029006E-4 45.000004 8 GCCTTAC 20 7.029006E-4 45.000004 27 AGTCCAT 20 7.029006E-4 45.000004 34 CGTATCC 20 7.029006E-4 45.000004 33 ATAGGTG 20 7.029006E-4 45.000004 24 GTCGACA 20 7.029006E-4 45.000004 14 TTTACGG 160 0.0 45.000004 2 GAATGCG 20 7.029006E-4 45.000004 34 CGACGGC 20 7.029006E-4 45.000004 31 CGACGCG 80 0.0 45.000004 13 CTATCGA 20 7.029006E-4 45.000004 41 ACTTGCG 20 7.029006E-4 45.000004 1 GAGTCGA 20 7.029006E-4 45.000004 28 CCCTAAG 20 7.029006E-4 45.000004 20 TTAGATG 20 7.029006E-4 45.000004 1 TAGGTGA 20 7.029006E-4 45.000004 34 CGGTTGC 20 7.029006E-4 45.000004 29 >>END_MODULE