##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935311.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1064184 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.403349420776856 33.0 31.0 34.0 31.0 34.0 2 32.555174669042195 34.0 31.0 34.0 31.0 34.0 3 32.605586064064106 34.0 31.0 34.0 31.0 34.0 4 36.0181068311495 37.0 35.0 37.0 35.0 37.0 5 32.14217560121182 37.0 35.0 37.0 0.0 37.0 6 33.65921964622659 37.0 35.0 37.0 17.0 37.0 7 35.32772809965194 37.0 35.0 37.0 32.0 37.0 8 35.82912165565353 37.0 35.0 37.0 35.0 37.0 9 37.84771336535787 39.0 38.0 39.0 35.0 39.0 10 37.62520861054104 39.0 37.0 39.0 35.0 39.0 11 37.50470501341873 39.0 37.0 39.0 35.0 39.0 12 37.29855645264353 39.0 37.0 39.0 35.0 39.0 13 37.24543687933666 39.0 37.0 39.0 34.0 39.0 14 38.47578238349759 40.0 38.0 41.0 34.0 41.0 15 38.57042673071574 40.0 38.0 41.0 35.0 41.0 16 38.63656285003345 40.0 38.0 41.0 35.0 41.0 17 38.63046146155176 40.0 38.0 41.0 35.0 41.0 18 38.62326439788608 40.0 38.0 41.0 35.0 41.0 19 38.62655142343805 40.0 38.0 41.0 35.0 41.0 20 38.55596682528585 40.0 38.0 41.0 35.0 41.0 21 38.50733801673395 40.0 38.0 41.0 34.0 41.0 22 38.453849146388215 40.0 37.0 41.0 34.0 41.0 23 38.41774918623095 40.0 37.0 41.0 34.0 41.0 24 38.395655262623755 40.0 37.0 41.0 34.0 41.0 25 38.30782646609985 40.0 37.0 41.0 34.0 41.0 26 38.274554964179124 40.0 37.0 41.0 34.0 41.0 27 38.19824767145531 40.0 37.0 41.0 34.0 41.0 28 38.19730328589793 40.0 37.0 41.0 34.0 41.0 29 38.13352390188163 40.0 37.0 41.0 34.0 41.0 30 38.06227400524721 40.0 37.0 41.0 34.0 41.0 31 37.90225656465423 40.0 36.0 41.0 34.0 41.0 32 37.91615077843681 40.0 36.0 41.0 34.0 41.0 33 37.89112691038392 40.0 36.0 41.0 34.0 41.0 34 37.86331780970208 40.0 36.0 41.0 34.0 41.0 35 37.78882505281042 40.0 36.0 41.0 33.0 41.0 36 37.769818941085376 40.0 36.0 41.0 33.0 41.0 37 37.72672582936785 40.0 36.0 41.0 33.0 41.0 38 37.71407388196026 40.0 36.0 41.0 33.0 41.0 39 37.70150368733226 40.0 36.0 41.0 33.0 41.0 40 37.63623489922795 40.0 36.0 41.0 33.0 41.0 41 37.584943957060055 40.0 35.0 41.0 33.0 41.0 42 37.5503070897514 40.0 35.0 41.0 33.0 41.0 43 37.47042146846786 39.0 35.0 41.0 33.0 41.0 44 37.404293806334245 39.0 35.0 41.0 33.0 41.0 45 37.4012454613112 39.0 35.0 41.0 33.0 41.0 46 37.306223359870096 39.0 35.0 41.0 33.0 41.0 47 37.25927753095329 39.0 35.0 41.0 33.0 41.0 48 37.21239278169941 39.0 35.0 41.0 33.0 41.0 49 37.1897763920525 39.0 35.0 41.0 33.0 41.0 50 37.097656984130566 39.0 35.0 41.0 33.0 41.0 51 36.43723829713659 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 4.0 10 14.0 11 13.0 12 12.0 13 24.0 14 14.0 15 19.0 16 39.0 17 70.0 18 90.0 19 179.0 20 373.0 21 642.0 22 983.0 23 1470.0 24 2105.0 25 3148.0 26 4365.0 27 5663.0 28 6727.0 29 8571.0 30 11532.0 31 15844.0 32 21839.0 33 34094.0 34 59223.0 35 88754.0 36 84669.0 37 132695.0 38 222622.0 39 357953.0 40 431.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.17860445186171 4.785356667643941 55.6771197462093 16.35891913428505 2 20.366402802522874 5.139336806416935 53.43258308713531 21.061677303924885 3 20.86039632244048 5.063879930538328 51.69632319222992 22.379400554791275 4 18.672146921960863 5.479973388060711 50.72055208497779 25.127327605000637 5 16.562925208422605 16.334393300406695 44.51852311254444 22.584158378626253 6 21.564315945362832 7.452000781819685 52.43754839388677 18.54613487893071 7 82.18428392082572 2.556982627064493 10.084440284762785 5.174293167347 8 84.4587026303722 3.3479172774632957 6.918540402787487 5.274839689377025 9 78.42750877667771 5.679374995301564 9.581895612037016 6.311220615983702 10 40.015166550145466 25.201750825045295 18.314408034700765 16.468674590108478 11 30.17899160295588 25.881426520225826 23.90282131661442 20.036760560203877 12 25.696402125948143 22.361076655916644 29.6261736692151 22.316347548920113 13 23.733019853709507 25.099982709756958 30.151834645136553 21.01516279139698 14 20.563643129383642 27.28616479856867 29.620817452620972 22.529374619426715 15 18.66632086180585 24.56811979883178 33.98782541365027 22.777733925712095 16 20.40004360148245 23.358742473106155 32.221401562135874 24.019812363275523 17 19.6201972591206 23.944167549972562 29.07561098456658 27.360024206340256 18 20.993362050171775 22.848586334694 32.052163911504024 24.1058877036302 19 22.848022522420937 24.512114446373936 29.660660186584277 22.979202844620854 20 24.969272231117927 24.86440314832773 29.265239845740965 20.901084774813377 21 24.53344534403825 26.621242191200018 27.95259090533216 20.89272155942957 22 22.663186065567608 25.65007555084459 27.287198454402624 24.39953992918518 23 21.53076911511543 25.23755290438496 27.613457823083227 25.61822015741639 24 22.511238657976442 24.422092420107802 28.82415071077934 24.24251821113642 25 20.924764890282134 25.663231170549455 28.250283785510778 25.16172015365764 26 19.713038346752064 26.620960285063482 29.360899994737753 24.305101373446696 27 20.43603361824647 28.0300211241665 29.082846575404254 22.45109868218278 28 20.705723822196163 25.270629891071465 30.53193808589492 23.49170820083745 29 21.77640332874766 24.22052953248686 30.476120670861427 23.526946467904047 30 22.244837358952964 27.808724806988266 28.42901227607256 21.517425557986215 31 24.10663945332762 27.21662795155725 26.417424054486816 22.25930854062831 32 23.90357306631184 26.96488577163348 26.18231433661848 22.949226825436202 33 24.14751584312487 27.116457304375935 25.865733745292168 22.870293107207022 34 21.74078918683235 25.637953586973683 28.45128286085865 24.169974365335317 35 20.524364207693406 24.77738812085128 28.689211640092317 26.009036031362996 36 23.3405125429437 26.65901761349541 27.910211016140067 22.090258827420822 37 22.965483412642925 27.41339843485713 28.730275967313922 20.89084218518602 38 23.37095840568924 27.364816610661315 25.760300850228905 23.503924133420536 39 23.254907046149913 26.108642866271246 27.882866120896388 22.753583966682452 40 22.24934785713749 24.942867022996023 29.340978627756105 23.466806492110386 41 20.93810844741135 23.789025206167356 28.271802620599445 27.00106372582185 42 22.50569450395796 24.270802793501876 27.010742503176143 26.21276019936402 43 24.11453282515054 24.450001127624546 27.714662126098492 23.72080392112642 44 22.2044308127166 25.09678777354292 27.85862219315457 24.840159220585914 45 21.77997413981041 25.214530569901445 27.137130421055005 25.86836486923314 46 22.64551994767822 25.45330506754471 28.778293979236675 23.122881005540396 47 20.637408568443053 25.43075257662209 30.29532486863174 23.63651398630312 48 21.807131097629735 23.941254519895054 29.152853265976557 25.098761116498654 49 23.32143689437165 22.643828510859024 30.070081865542047 23.964652729227275 50 22.541308645873272 22.79041970185607 29.132180149297486 25.536091502973168 51 20.562797410974042 23.310630492471226 27.619659758086947 28.50691233846778 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 237.0 1 569.0 2 901.0 3 1422.0 4 1943.0 5 1481.0 6 1019.0 7 1145.0 8 1271.0 9 1403.5 10 1536.0 11 1652.0 12 1768.0 13 1835.5 14 1903.0 15 2012.5 16 2122.0 17 1985.5 18 1849.0 19 2011.5 20 2174.0 21 2849.0 22 3524.0 23 3666.5 24 3809.0 25 5053.0 26 7302.0 27 8307.0 28 9773.5 29 11240.0 30 12630.5 31 14021.0 32 17239.5 33 20458.0 34 24236.5 35 28015.0 36 29887.5 37 31760.0 38 34728.5 39 37697.0 40 45155.5 41 52614.0 42 58837.5 43 65061.0 44 72507.5 45 79954.0 46 91571.0 47 103188.0 48 113951.5 49 124715.0 50 120689.0 51 116663.0 52 98486.5 53 80310.0 54 70150.0 55 59990.0 56 54251.0 57 48512.0 58 44172.5 59 39833.0 60 35862.0 61 31891.0 62 28267.5 63 24644.0 64 21672.0 65 18700.0 66 15161.0 67 11622.0 68 10049.0 69 8476.0 70 7613.0 71 6750.0 72 5229.5 73 3709.0 74 3078.5 75 2183.5 76 1919.0 77 1280.0 78 641.0 79 517.5 80 394.0 81 277.0 82 160.0 83 106.5 84 53.0 85 65.0 86 77.0 87 42.5 88 8.0 89 4.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1064184.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.949725307209427 #Duplication Level Percentage of deduplicated Percentage of total 1 67.92932547152478 17.627473362900922 2 12.520421153069433 6.498029793054521 3 5.381582931658937 4.189517963835486 4 2.943753982688857 3.0555842889111826 5 1.8878490955476845 2.449458272546308 6 1.2842732704305042 1.9995923152237842 7 0.9122669467877009 1.6571153673191235 8 0.6854518351394024 1.4229829466552075 9 0.5508618109020748 1.2865241407626702 >10 4.367382838995533 26.302616443776607 >50 1.3725475321767417 24.170185175955147 >100 0.15699784810370557 6.5311480745447 >500 0.004735433933521564 0.9207733434760226 >1k 0.002185584892394568 1.2917861114817086 >5k 3.6426414873242795E-4 0.5972123995566687 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC 6318 0.5936943235380349 No Hit CTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGCT 4155 0.39043999909790034 No Hit GCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC 3057 0.28726235312690285 No Hit TCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTGC 3014 0.28322169850326634 No Hit TCCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGCCGTCTTCTG 1303 0.12244123196740414 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAGGATCGTCGTATGC 1084 0.1018620840005112 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.396871217759335E-5 0.0 0.0 0.4014343384226788 0.0 2 9.396871217759335E-5 0.0 0.0 1.6299812814325343 0.0 3 9.396871217759335E-5 0.0 0.0 2.2230178239853258 0.0 4 9.396871217759335E-5 0.0 0.0 2.860783473534652 0.0 5 9.396871217759335E-5 0.0 0.0 4.060951865466874 0.0 6 9.396871217759335E-5 0.0 0.0 4.853014140411808 0.0 7 9.396871217759335E-5 0.0 0.0 5.5873796260797 0.0 8 9.396871217759335E-5 0.0 0.0 6.785668643768371 0.0 9 9.396871217759335E-5 0.0 0.0 7.413379641114695 0.0 10 9.396871217759335E-5 0.0 0.0 8.593062853792201 0.0 11 9.396871217759335E-5 0.0 0.0 10.503352803650497 0.0 12 9.396871217759335E-5 0.0 0.0 12.196199153529841 0.0 13 9.396871217759335E-5 0.0 0.0 12.732102719078656 0.0 14 9.396871217759335E-5 0.0 0.0 12.939209760718072 0.0 15 9.396871217759335E-5 0.0 0.0 13.2590792569706 0.0 16 9.396871217759335E-5 0.0 0.0 14.023514730535322 0.0 17 9.396871217759335E-5 0.0 0.0 15.087898333370921 0.0 18 9.396871217759335E-5 0.0 0.0 16.337212361772025 0.0 19 9.396871217759335E-5 0.0 0.0 17.13303338520406 0.0 20 9.396871217759335E-5 0.0 0.0 17.935150312352 0.0 21 9.396871217759335E-5 0.0 0.0 18.974350300324005 0.0 22 1.879374243551867E-4 0.0 0.0 19.99748163851364 0.0 23 1.879374243551867E-4 0.0 0.0 21.00294685881389 0.0 24 1.879374243551867E-4 0.0 0.0 21.83184486893244 0.0 25 1.879374243551867E-4 0.0 0.0 22.52796508874405 0.0 26 1.879374243551867E-4 0.0 0.0 23.15971674071401 0.0 27 1.879374243551867E-4 0.0 0.0 23.76900987047353 0.0 28 1.879374243551867E-4 0.0 0.0 24.40461423964277 0.0 29 1.879374243551867E-4 0.0 0.0 25.067093660494802 0.0 30 1.879374243551867E-4 0.0 0.0 25.755696383332207 0.0 31 1.879374243551867E-4 0.0 0.0 26.40483224705502 0.0 32 2.8190613653278004E-4 0.0 0.0 27.046074738954918 0.0 33 2.8190613653278004E-4 0.0 0.0 27.64108462446344 0.0 34 2.8190613653278004E-4 0.0 0.0 28.25451237755877 0.0 35 2.8190613653278004E-4 0.0 0.0 28.911353675680147 0.0 36 3.758748487103734E-4 0.0 0.0 29.511625809070612 0.0 37 3.758748487103734E-4 0.0 0.0 30.113683347992453 0.0 38 3.758748487103734E-4 0.0 0.0 30.725701570405118 0.0 39 3.758748487103734E-4 0.0 0.0 31.317516519699602 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGATA 65 0.0 45.000004 14 TCGCATA 20 7.0330506E-4 45.0 31 TCGCAAG 20 7.0330506E-4 45.0 12 CGACGAT 20 7.0330506E-4 45.0 15 CTATCGA 20 7.0330506E-4 45.0 42 ATCCGGC 25 3.890611E-5 45.0 12 AATGACG 20 7.0330506E-4 45.0 34 AACATCG 20 7.0330506E-4 45.0 23 AGGTTAC 25 3.890611E-5 45.0 41 AGATTCG 35 1.2118107E-7 45.0 40 ACTCGTC 25 3.890611E-5 45.0 37 CATACGA 50 2.1827873E-11 45.0 18 ACGTCTA 20 7.0330506E-4 45.0 34 CATCGGT 20 7.0330506E-4 45.0 33 GGCATCG 20 7.0330506E-4 45.0 10 GACGCGT 20 7.0330506E-4 45.0 42 TGAATCG 25 3.890611E-5 45.0 28 GTTATCG 25 3.890611E-5 45.0 1 TACGTTG 20 7.0330506E-4 45.0 1 TACGTCA 20 7.0330506E-4 45.0 36 >>END_MODULE