##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935310.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1174071 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.37269807362587 33.0 31.0 34.0 30.0 34.0 2 32.52526210084399 34.0 31.0 34.0 31.0 34.0 3 32.578495678711086 34.0 31.0 34.0 31.0 34.0 4 35.998451541687004 37.0 35.0 37.0 35.0 37.0 5 32.18101205123029 37.0 35.0 37.0 0.0 37.0 6 33.6691256320955 37.0 35.0 37.0 17.0 37.0 7 35.31222302569436 37.0 35.0 37.0 32.0 37.0 8 35.81146029499068 37.0 35.0 37.0 35.0 37.0 9 37.81396951291702 39.0 38.0 39.0 35.0 39.0 10 37.58489648411382 39.0 37.0 39.0 35.0 39.0 11 37.50755874218851 39.0 37.0 39.0 35.0 39.0 12 37.18503139929357 39.0 37.0 39.0 34.0 39.0 13 37.06114962383025 39.0 37.0 39.0 33.0 39.0 14 38.094862235759166 40.0 37.0 41.0 33.0 41.0 15 38.230400887169516 40.0 37.0 41.0 33.0 41.0 16 38.33991044834597 40.0 37.0 41.0 34.0 41.0 17 38.37193236184183 40.0 37.0 41.0 34.0 41.0 18 38.349819559464464 40.0 37.0 41.0 34.0 41.0 19 38.36573852858984 40.0 37.0 41.0 34.0 41.0 20 38.28485670798444 40.0 37.0 41.0 34.0 41.0 21 38.208977991961305 40.0 37.0 41.0 34.0 41.0 22 38.21682930589377 40.0 37.0 41.0 34.0 41.0 23 38.17015921524337 40.0 37.0 41.0 34.0 41.0 24 38.14544009689363 40.0 36.0 41.0 34.0 41.0 25 38.05842661985519 40.0 36.0 41.0 34.0 41.0 26 37.998376588809364 40.0 36.0 41.0 34.0 41.0 27 37.92956558845249 40.0 36.0 41.0 34.0 41.0 28 37.903448769282264 40.0 36.0 41.0 34.0 41.0 29 37.83851487686861 40.0 36.0 41.0 34.0 41.0 30 37.76121461138211 40.0 36.0 41.0 33.0 41.0 31 37.59049495303095 40.0 35.0 41.0 33.0 41.0 32 37.589321259106136 40.0 35.0 41.0 33.0 41.0 33 37.54482395016996 39.0 35.0 41.0 33.0 41.0 34 37.441631724146156 39.0 35.0 41.0 33.0 41.0 35 37.355240867034446 39.0 35.0 41.0 33.0 41.0 36 37.34130900090369 39.0 35.0 41.0 33.0 41.0 37 37.329233070231695 39.0 35.0 41.0 33.0 41.0 38 37.333904849025316 39.0 35.0 41.0 33.0 41.0 39 37.315240730756486 39.0 35.0 41.0 33.0 41.0 40 37.19296873868787 39.0 35.0 41.0 33.0 41.0 41 37.14209106604285 39.0 35.0 41.0 33.0 41.0 42 37.140996583681904 39.0 35.0 41.0 33.0 41.0 43 37.060423091959514 39.0 35.0 41.0 32.0 41.0 44 36.99452077429729 39.0 35.0 41.0 32.0 41.0 45 36.963175140174656 39.0 35.0 41.0 32.0 41.0 46 36.90014147355654 39.0 35.0 41.0 32.0 41.0 47 36.85868742179987 39.0 35.0 41.0 32.0 41.0 48 36.833932530485804 39.0 35.0 41.0 32.0 41.0 49 36.80032212702639 39.0 35.0 41.0 32.0 41.0 50 36.701025747165204 38.0 35.0 40.0 32.0 41.0 51 36.05851434879151 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 6.0 10 10.0 11 15.0 12 16.0 13 29.0 14 33.0 15 36.0 16 48.0 17 113.0 18 160.0 19 298.0 20 506.0 21 811.0 22 1355.0 23 2028.0 24 2850.0 25 4299.0 26 5606.0 27 7214.0 28 9130.0 29 11462.0 30 14816.0 31 20432.0 32 28507.0 33 44549.0 34 79740.0 35 102231.0 36 96037.0 37 148571.0 38 241929.0 39 350763.0 40 468.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.07971919926478 4.785570889665106 52.67160163226926 18.463108278800856 2 19.568492876495544 5.146281613292552 52.55832057856807 22.726904931643826 3 21.19897348627127 5.122432970408093 51.20073658237023 22.4778569609504 4 19.703152535068153 5.038025809342025 50.13231738114645 25.126504274443366 5 16.3343613801891 16.35344029449667 44.52354244334457 22.78865588196966 6 21.369661630344332 7.168391008720938 51.64704689920797 19.81490046172676 7 82.27219648556178 2.835177770339272 9.629315433223375 5.263310310875577 8 83.44376106726084 3.264197821085778 7.575010369900968 5.717030741752415 9 77.5652409436908 5.6720590151702925 10.28983766739831 6.4728623737405995 10 39.014420763309886 27.949331854717474 16.964732115860116 16.071515266112527 11 33.055155948831036 24.495622496424833 23.601553909431374 18.847667645312765 12 29.11663775018717 22.13537341438465 28.291304358935704 20.45668447649248 13 25.538404406547816 24.51631971149956 29.59216265455837 20.353113227394253 14 19.97528258512475 27.648924128097875 31.01728941435399 21.358503872423388 15 18.893320761691584 23.596869354579066 36.34822766255192 21.161582221177426 16 21.578337255583353 24.510783419401385 32.20043762259693 21.710441702418336 17 22.759781989334545 23.634516140846678 28.40407437028936 25.201627499529415 18 23.86397415488501 22.565671070999965 30.906137703767488 22.664217070347533 19 25.6954647546869 24.415729542761895 27.766719389202187 22.122086313349023 20 26.863707561127054 26.84062548176388 26.86438895092375 19.431278006185316 21 24.82899245445974 26.20335567440129 28.845018742478096 20.122633128660876 22 23.079268630261712 24.328426475059857 29.082823781525992 23.509481113152443 23 22.039212279325525 26.343381277622903 28.088676068142387 23.528730374909184 24 22.86394945450488 25.51992170831236 28.208941367259733 23.40718746992303 25 21.823467234945756 27.221266856944766 26.040077644367333 24.91518826374214 26 20.424233287424695 28.903022048922082 26.309567308961725 24.363177354691494 27 20.9839098316882 27.44816965924548 28.16396964067761 23.40395086838871 28 18.91504006146136 27.164285635195828 28.43499243231457 25.48568187102824 29 21.47416979041302 27.242134419468666 28.03160967266886 23.252086117449455 30 22.254361107633184 26.801445568453698 28.901063053256575 22.043130270656544 31 24.047268010196998 26.958335569143603 26.440990366000012 22.553406054659387 32 26.031645445633185 27.119654603512057 26.03888521222311 20.809814738631648 33 25.46600674064856 25.798269440263834 26.347214095229333 22.38850972385827 34 21.734886561374907 25.448546127108155 30.028763166793148 22.787804144723786 35 22.348137378403862 27.538198286134314 27.34604636346524 22.767617971996582 36 23.71662361134889 28.63855763407835 25.97560113485471 21.669217619718058 37 22.371474978940796 27.838180144130973 27.38761114106387 22.402733735864356 38 23.897617776097015 26.427362570066038 26.147055842449053 23.5279638113879 39 23.818832080853714 23.30148687771012 28.64664913791415 24.23303190352202 40 24.64016230704957 23.719008475637334 29.90151362225964 21.73931559505345 41 21.47187009984916 25.118838639230507 27.78460587136553 25.62468538955481 42 24.279877452045064 25.102400110385148 25.94672724221959 24.670995195350194 43 23.688345934785886 24.18984882515623 27.225951411797073 24.89585382826081 44 23.17210799006193 24.365732566429116 27.082178164693616 25.379981278815333 45 22.22574273617183 23.843532460984047 27.14529189461285 26.78543290823127 46 21.57705964971454 25.214659079391282 28.66402457772997 24.54425669316421 47 19.845988871201143 26.20258911088001 30.54866358167436 23.402758436244486 48 21.538901821099405 25.32512940018108 28.875255414706608 24.260713364012908 49 23.55002380605602 22.959003331144366 30.030807336183248 23.460165526616365 50 21.635829519679813 24.008769486683516 28.38950966338492 25.96589133025175 51 20.70079237115984 24.02009759205363 26.71533493289588 28.56377510389065 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 313.0 1 715.5 2 1118.0 3 1712.5 4 2307.0 5 1760.0 6 1213.0 7 1306.5 8 1400.0 9 1579.5 10 1759.0 11 1982.5 12 2206.0 13 2311.5 14 2417.0 15 2351.5 16 2286.0 17 2443.0 18 2600.0 19 2517.0 20 2434.0 21 3384.5 22 4335.0 23 4175.0 24 4015.0 25 5144.5 26 8278.0 27 10282.0 28 11340.5 29 12399.0 30 14711.0 31 17023.0 32 19820.5 33 22618.0 34 26579.5 35 30541.0 36 32667.0 37 34793.0 38 39029.5 39 43266.0 40 48519.5 41 53773.0 42 61752.5 43 69732.0 44 74458.0 45 79184.0 46 91543.5 47 103903.0 48 118110.5 49 132318.0 50 128217.5 51 124117.0 52 106043.0 53 87969.0 54 79412.0 55 70855.0 56 65171.0 57 59487.0 58 57013.0 59 54539.0 60 47303.5 61 40068.0 62 34749.5 63 29431.0 64 25836.0 65 22241.0 66 18701.0 67 15161.0 68 12304.0 69 9447.0 70 7682.5 71 5918.0 72 5213.0 73 4508.0 74 3675.5 75 2110.0 76 1377.0 77 1134.5 78 892.0 79 671.5 80 451.0 81 307.5 82 164.0 83 100.5 84 37.0 85 25.0 86 13.0 87 28.0 88 43.0 89 21.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1174071.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.401273696673286 #Duplication Level Percentage of deduplicated Percentage of total 1 68.22084551670706 17.328963687883427 2 12.242056696525085 6.219276655172514 3 5.400582639595486 4.1154503324960166 4 2.953829254400821 3.001241013771026 5 1.8900285098141976 2.4004565736153 6 1.2505565422020704 1.9059437400984092 7 0.9364552239205614 1.6651008813239954 8 0.7148469242671789 1.4526417899628556 9 0.5521853332655434 1.262358970341014 >10 4.174316238815363 24.44059093995077 >50 1.4652942505109663 25.498618661439565 >100 0.1892544185749226 7.443806011270417 >500 0.007059223428161707 1.2464833631828127 >1k 0.0020169209794747736 1.0797220254450381 >5k 6.723069931582579E-4 0.9393453540467271 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 5679 0.4837015819315868 No Hit CTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGCT 5322 0.4532945622539012 Illumina Single End Adapter 2 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 3864 0.3291112718055382 No Hit TCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTGC 3864 0.3291112718055382 No Hit TCCTGTCTCTTATACACATCTGACGCAACGTTGGTCGTATGCCGTCTTCTG 1627 0.13857764990362595 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.51737245873546E-5 0.0 0.0 0.46717787936163996 0.0 2 8.51737245873546E-5 0.0 0.0 1.6784334167184096 0.0 3 8.51737245873546E-5 0.0 0.0 2.3365707866048986 0.0 4 8.51737245873546E-5 0.0 0.0 3.0330363325556973 0.0 5 8.51737245873546E-5 0.0 0.0 4.286878732206144 0.0 6 8.51737245873546E-5 0.0 0.0 5.1096569117199895 0.0 7 8.51737245873546E-5 0.0 0.0 5.883034330973169 0.0 8 8.51737245873546E-5 0.0 0.0 7.136195340826918 0.0 9 8.51737245873546E-5 0.0 0.0 7.757878356590019 0.0 10 8.51737245873546E-5 0.0 0.0 8.89341445278863 0.0 11 8.51737245873546E-5 0.0 0.0 10.68708791887373 0.0 12 8.51737245873546E-5 0.0 0.0 12.238953180855331 0.0 13 8.51737245873546E-5 0.0 0.0 12.763708498038023 0.0 14 8.51737245873546E-5 0.0 0.0 12.960715323008575 0.0 15 8.51737245873546E-5 0.0 0.0 13.272962197345816 0.0 16 8.51737245873546E-5 0.0 0.0 13.976667509886541 0.0 17 8.51737245873546E-5 0.0 0.0 14.948244186254493 0.0 18 8.51737245873546E-5 0.0 0.0 16.043237589549523 0.0 19 8.51737245873546E-5 0.0 0.0 16.77334675671233 0.0 20 8.51737245873546E-5 0.0 0.0 17.54289135835908 0.0 21 8.51737245873546E-5 0.0 0.0 18.54674887634564 0.0 22 8.51737245873546E-5 0.0 0.0 19.503420150910806 0.0 23 8.51737245873546E-5 0.0 0.0 20.38641615370791 0.0 24 8.51737245873546E-5 0.0 0.0 21.10502686805142 0.0 25 2.555211737620638E-4 0.0 0.0 21.72900957437838 0.0 26 2.555211737620638E-4 0.0 0.0 22.336724099309155 0.0 27 2.555211737620638E-4 0.0 0.0 22.93438812473862 0.0 28 2.555211737620638E-4 0.0 0.0 23.533840798384425 0.0 29 2.555211737620638E-4 0.0 0.0 24.199984498382126 0.0 30 2.555211737620638E-4 0.0 0.0 24.921661466810782 0.0 31 3.406948983494184E-4 0.0 0.0 25.53857475399699 0.0 32 3.406948983494184E-4 0.0 0.0 26.13640912687563 0.0 33 3.406948983494184E-4 0.0 0.0 26.735265584449323 0.0 34 3.406948983494184E-4 0.0 0.0 27.33190752518374 0.0 35 3.406948983494184E-4 0.0 0.0 27.986297251188386 0.0 36 3.406948983494184E-4 0.0 0.0 28.568289311293782 0.0 37 3.406948983494184E-4 0.0 0.0 29.173618971936108 0.0 38 3.406948983494184E-4 0.0 0.0 29.836951939022427 0.0 39 3.406948983494184E-4 0.0 0.0 30.801544369974216 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGATTG 30 2.1655414E-6 45.000004 12 ATTAGCG 20 7.0333487E-4 45.0 14 ACGCATT 20 7.0333487E-4 45.0 10 CACGCAT 25 3.890857E-5 45.0 36 CGCGATT 20 7.0333487E-4 45.0 13 TAACGGT 20 7.0333487E-4 45.0 24 ACGGGTA 45 3.8562575E-10 45.0 5 ACCTCGC 20 7.0333487E-4 45.0 33 GTTACCG 20 7.0333487E-4 45.0 38 TACGCTT 20 7.0333487E-4 45.0 15 CGTAGTA 35 1.2119563E-7 45.0 21 CGAATCT 20 7.0333487E-4 45.0 27 CGTAAGT 25 3.890857E-5 45.0 30 TTAAACG 20 7.0333487E-4 45.0 31 TTACGCC 20 7.0333487E-4 45.0 14 TTACGAG 20 7.0333487E-4 45.0 25 CGAGACG 20 7.0333487E-4 45.0 14 GACGCGT 20 7.0333487E-4 45.0 32 CCGAAAT 20 7.0333487E-4 45.0 45 GCTACGC 20 7.0333487E-4 45.0 17 >>END_MODULE