##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935305.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1847838 Sequences flagged as poor quality 0 Sequence length 51 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27810176000277 33.0 31.0 34.0 30.0 34.0 2 32.445086095209646 34.0 31.0 34.0 30.0 34.0 3 32.520329163054335 34.0 31.0 34.0 30.0 34.0 4 35.96709505919891 37.0 35.0 37.0 35.0 37.0 5 31.73679673218107 37.0 35.0 37.0 0.0 37.0 6 33.35772670547959 37.0 35.0 37.0 17.0 37.0 7 35.18643409216609 37.0 35.0 37.0 32.0 37.0 8 35.75124713313613 37.0 35.0 37.0 35.0 37.0 9 37.827487582785935 39.0 38.0 39.0 35.0 39.0 10 37.549502174974215 39.0 37.0 39.0 35.0 39.0 11 37.42713809327441 39.0 37.0 39.0 35.0 39.0 12 37.17040563079664 39.0 37.0 39.0 34.0 39.0 13 37.04794954968996 39.0 37.0 39.0 33.0 39.0 14 38.06884099147219 40.0 37.0 41.0 33.0 41.0 15 38.233547529599456 40.0 37.0 41.0 33.0 41.0 16 38.349057655487115 40.0 37.0 41.0 34.0 41.0 17 38.37808076249108 40.0 37.0 41.0 34.0 41.0 18 38.343930582659304 40.0 37.0 41.0 34.0 41.0 19 38.367875863576785 40.0 37.0 41.0 34.0 41.0 20 38.2805792499126 40.0 37.0 41.0 34.0 41.0 21 38.20638226944137 40.0 37.0 41.0 34.0 41.0 22 38.21848452082921 40.0 37.0 41.0 34.0 41.0 23 38.17011447973253 40.0 37.0 41.0 34.0 41.0 24 38.115072858118516 40.0 36.0 41.0 34.0 41.0 25 38.02607317308119 40.0 36.0 41.0 34.0 41.0 26 37.98275552294086 40.0 36.0 41.0 34.0 41.0 27 37.95080304658742 40.0 36.0 41.0 34.0 41.0 28 37.91717401633693 40.0 36.0 41.0 34.0 41.0 29 37.84866422272948 40.0 36.0 41.0 34.0 41.0 30 37.79199367044081 40.0 36.0 41.0 33.0 41.0 31 37.59297081237641 40.0 36.0 41.0 33.0 41.0 32 37.60325201668112 40.0 35.0 41.0 33.0 41.0 33 37.61424540462963 40.0 35.0 41.0 33.0 41.0 34 37.49897068898897 39.0 35.0 41.0 33.0 41.0 35 37.30798695556645 39.0 35.0 41.0 32.0 41.0 36 37.226084754183 39.0 35.0 41.0 32.0 41.0 37 37.189739035564806 39.0 35.0 41.0 32.0 41.0 38 37.19523194132819 39.0 35.0 41.0 32.0 41.0 39 37.212006139066304 39.0 35.0 41.0 32.0 41.0 40 37.13990836859075 39.0 35.0 41.0 32.0 41.0 41 37.01939347496913 39.0 35.0 41.0 32.0 41.0 42 37.01536714798592 39.0 35.0 41.0 32.0 41.0 43 36.98089334671113 39.0 35.0 41.0 32.0 41.0 44 36.955449016634574 39.0 35.0 41.0 32.0 41.0 45 36.9319274741617 39.0 35.0 41.0 32.0 41.0 46 36.83317152261183 38.0 35.0 40.0 32.0 41.0 47 36.748034189144285 38.0 35.0 40.0 32.0 41.0 48 36.71058177177869 38.0 35.0 40.0 32.0 41.0 49 36.68984997602604 38.0 35.0 40.0 32.0 41.0 50 36.59715895008112 38.0 35.0 40.0 32.0 41.0 51 35.90324747082807 37.0 34.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 7.0 10 21.0 11 16.0 12 27.0 13 32.0 14 45.0 15 65.0 16 87.0 17 144.0 18 243.0 19 404.0 20 734.0 21 1129.0 22 1838.0 23 2731.0 24 4285.0 25 6214.0 26 8646.0 27 11159.0 28 14233.0 29 18531.0 30 24219.0 31 32500.0 32 46365.0 33 72728.0 34 127035.0 35 159038.0 36 164726.0 37 254221.0 38 388972.0 39 506976.0 40 463.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 26.16744541458721 4.275428906646579 52.67063454696787 16.88649113179835 2 19.133224882267818 4.206916407174222 52.11852987112506 24.541328839432893 3 20.38392976007637 4.179208350515576 53.533751335344334 21.903110554063723 4 18.702559423499245 4.2595725382852825 49.706143070983494 27.331724967231974 5 15.438582819489588 19.627315814481573 43.484818474346774 21.449282891682063 6 20.54709341403305 9.353742048815967 51.57221574618555 18.52694879096544 7 81.10602769290381 2.306858068726804 8.215817620375812 8.371296617993568 8 82.5474419294332 2.403132742155968 9.71270208752066 5.336723240890165 9 78.42051088894156 4.468519426486521 11.918036104896641 5.192933579675275 10 44.54670809887014 23.122697985429458 15.97721228809019 16.353381627610215 11 30.89594434144119 26.419740258615743 22.57724973726052 20.10706566268255 12 27.118394577879663 19.557504499853344 28.749868765551955 24.574232156715038 13 25.32673318764957 21.066565359084507 29.786756198324742 23.81994525494118 14 21.23557368124262 22.771260251169203 31.320602780113845 24.672563287474336 15 19.150325948486827 20.54444166642314 36.47992951763088 23.82530286745916 16 24.835131651151237 20.267469334432995 31.264753728411254 23.632645286004507 17 23.844298039113816 20.882241841546715 26.729615907888025 28.543844211451436 18 23.724752927475244 23.279042859817796 30.148476219235672 22.84772799347129 19 24.456364681319467 22.91369697993006 29.92843528491134 22.701503053839136 20 25.05111378811346 26.12869742910363 28.80490605778212 20.015282725000784 21 24.91609112920072 26.69319496622539 28.255831950636367 20.13488195393752 22 25.475718109487953 22.38210276009044 28.27596358555241 23.866215544869192 23 23.02923741150469 24.366205262582543 28.104032929293588 24.500524396619184 24 22.468365733359743 27.09853352945442 27.145074405873242 23.288026331312594 25 22.899842951600736 25.640234695898666 25.57740451273326 25.88251783976734 26 20.887058281083082 25.673138013180807 27.128406278039524 26.31139742769658 27 21.206079753744646 22.791608355277898 29.54550128312114 26.45681060785632 28 21.36101757838079 22.793340108819063 28.650942344512885 27.19469996828726 29 19.909158703306243 25.10284992515578 28.078056626176107 26.909934745361873 30 22.934748608914852 24.854126822805895 27.82424649779905 24.386878070480204 31 25.595533807617333 24.30121038749068 25.52740012923211 24.57585567565988 32 23.966386663765977 27.303692206784362 23.49464617569289 25.23527495375677 33 23.691849610193103 24.085498837019262 24.815595306514965 27.40705624627267 34 22.88290423727621 25.020429280055932 27.475081690061575 24.621584792606278 35 22.735055778699216 27.150973191372834 25.447847700934823 24.666123328993127 36 23.91989990464532 26.446365969311163 25.168007152142124 24.46572697390139 37 23.16209537849097 27.383948159957743 24.483639799592822 24.97031666195846 38 23.746724550528782 26.599680275002463 23.188234033502937 26.465361140965822 39 22.781921358907002 23.89316595935358 26.735244106896815 26.5896685748426 40 24.00107585188745 21.635338162761023 29.47076529436022 24.89282069099131 41 22.002199326997278 25.927056376154184 25.857028592333307 26.213715704515224 42 21.592423145319017 24.909326466930544 25.67660152026314 27.821648867487305 43 21.370325753664552 24.78723784227838 27.256068984402308 26.586367419654756 44 22.681966709202865 22.454674056924905 27.57205988836684 27.291299345505397 45 21.831513368596163 22.748098047556116 25.896967158376437 29.52342142547128 46 22.571513303655408 22.72731700506213 28.224173331211933 26.476996360070526 47 20.88538064484008 23.507093154270017 30.470690612488756 25.136835588401148 48 20.19094747483275 24.920528747649957 27.84897810305882 27.039545674458477 49 22.724340553663254 22.92857923692445 28.49335277226683 25.853727437145462 50 21.453071102553363 22.145501932528717 28.4723552605802 27.929071704337716 51 21.3034908904352 23.531878876827946 25.339126048928534 29.82550418380832 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 487.0 1 1147.0 2 1807.0 3 2610.5 4 3414.0 5 2493.0 6 1572.0 7 1739.5 8 1907.0 9 2058.0 10 2209.0 11 2377.5 12 2546.0 13 2453.0 14 2360.0 15 2305.0 16 2250.0 17 2313.5 18 2377.0 19 2586.0 20 2795.0 21 3257.0 22 3719.0 23 4539.0 24 5359.0 25 5243.5 26 7488.0 27 9848.0 28 13186.0 29 16524.0 30 24849.0 31 33174.0 32 29338.5 33 25503.0 34 29205.0 35 32907.0 36 36177.0 37 39447.0 38 48887.5 39 58328.0 40 63823.5 41 69319.0 42 77785.5 43 86252.0 44 98079.5 45 109907.0 46 134769.0 47 159631.0 48 188192.5 49 216754.0 50 209925.5 51 203097.0 52 174178.0 53 145259.0 54 130244.0 55 115229.0 56 110008.5 57 104788.0 58 93684.0 59 82580.0 60 76827.5 61 71075.0 62 68994.0 63 66913.0 64 63447.0 65 59981.0 66 49498.5 67 39016.0 68 31365.0 69 23714.0 70 20455.5 71 17197.0 72 14082.5 73 10968.0 74 8360.0 75 4646.0 76 3540.0 77 2669.5 78 1799.0 79 1370.5 80 942.0 81 629.0 82 316.0 83 192.5 84 69.0 85 73.0 86 77.0 87 39.0 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1847838.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.41028990920343 #Duplication Level Percentage of deduplicated Percentage of total 1 66.7392707006818 15.623856754317671 2 12.695775626914052 5.944235760965137 3 5.767106527244439 4.050289072201552 4 3.3193001616390383 3.1082311631854274 5 1.9512920860076624 2.2840156715486843 6 1.3242399161174816 1.8600504207389685 7 0.8924015615805384 1.4623965490418385 8 0.644049654415497 1.2061911300631252 9 0.5012197979644375 1.056033070072187 >10 4.3859995968403265 23.92769272145316 >50 1.5693503493110637 25.398254122462916 >100 0.19614282670914526 7.2777953094154135 >500 0.007172940047524385 1.1313795589328366 >1k 0.0046995124449297696 2.187021134187688 >5k 0.0017313993218162308 2.6537246115917856 >10k+ 2.473427602594615E-4 0.8288329498216195 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAAA 14314 0.7746350058825503 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACCTGTCTCTT 8847 0.47877573683407315 No Hit CTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGCT 6726 0.3639929474337036 No Hit GCTCAACTTGACCCCTGTCTCTTATACACATCTGACGCACGCTGAATCGTA 6707 0.3629647187686367 No Hit CCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGC 6396 0.34613423904043533 No Hit GCTCAACTTGACCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATG 6096 0.3298990495920097 No Hit TCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGC 5917 0.32021205322111573 No Hit GCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGC 5141 0.2782170298478546 No Hit GCTCAACTTGACCCTGCATTAGAACTGTCTCTTATACACATCTGACGCACG 4793 0.25938421008768087 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 3909 0.2115445185129865 No Hit GCTCCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTC 2683 0.14519671096708694 No Hit GCTCAACCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTC 2677 0.14487200717811843 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACCTGTCTCTTATACACATC 2582 0.13973086385278363 No Hit GCCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTG 2487 0.13458972052744883 No Hit TCCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTG 2311 0.12506507605103911 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGCTGTCTCTTATACACATCTG 1977 0.10698989846512519 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0823459632283782E-4 0.0 0.0 0.37838814874464105 0.0 2 1.0823459632283782E-4 0.0 0.0 1.3901110378723676 0.0 3 1.0823459632283782E-4 0.0 0.0 2.0122434975360393 0.0 4 1.0823459632283782E-4 0.0 0.0 2.689521484026197 0.0 5 1.0823459632283782E-4 0.0 0.0 3.871822096958716 0.0 6 1.0823459632283782E-4 0.0 0.0 4.6232948992281795 0.0 7 1.0823459632283782E-4 0.0 0.0 5.319026884391381 0.0 8 1.0823459632283782E-4 0.0 0.0 6.598792751312615 0.0 9 1.0823459632283782E-4 0.0 0.0 7.181257231423967 0.0 10 1.0823459632283782E-4 0.0 0.0 8.259544397290238 0.0 11 1.0823459632283782E-4 0.0 0.0 10.34809328523388 0.0 12 1.0823459632283782E-4 0.0 0.0 12.244363412809998 0.0 13 1.0823459632283782E-4 0.0 0.0 13.171609199507749 0.0 14 1.0823459632283782E-4 0.0 0.0 13.374873771402038 0.0 15 1.0823459632283782E-4 0.0 0.0 14.053667042240717 0.0 16 1.0823459632283782E-4 0.0 0.0 14.763631876820371 0.0 17 1.0823459632283782E-4 0.0 0.0 15.757496057554828 0.0 18 1.0823459632283782E-4 0.0 0.0 16.85910777892867 0.0 19 1.0823459632283782E-4 0.0 0.0 17.642239200622566 0.0 20 1.0823459632283782E-4 0.0 0.0 18.56883557974238 0.0 21 1.0823459632283782E-4 0.0 0.0 19.76066083715131 0.0 22 1.6235189448425674E-4 0.0 0.0 20.962714263912744 0.0 23 1.6235189448425674E-4 0.0 0.0 22.127967927924416 0.0 24 1.6235189448425674E-4 0.0 0.0 23.036489129458317 0.0 25 1.6235189448425674E-4 0.0 0.0 24.048644956971337 0.0 26 1.6235189448425674E-4 0.0 0.0 24.731172321383152 0.0 27 1.6235189448425674E-4 0.0 0.0 25.4072056100156 0.0 28 1.6235189448425674E-4 0.0 0.0 26.089787091725572 0.0 29 1.6235189448425674E-4 0.0 0.0 26.88303844817565 0.0 30 1.6235189448425674E-4 0.0 0.0 27.671906303474657 0.0 31 1.6235189448425674E-4 0.0 0.0 28.35124074729495 0.0 32 1.6235189448425674E-4 0.0 0.0 29.135725101442876 0.0 33 1.6235189448425674E-4 0.0 0.0 29.791247934072143 0.0 34 2.1646919264567565E-4 0.0 0.0 30.67703987037825 0.0 35 2.1646919264567565E-4 0.0 0.0 31.43424910625282 0.0 36 2.1646919264567565E-4 0.0 0.0 32.10465419587648 0.0 37 2.1646919264567565E-4 0.0 0.0 32.802388521071656 0.0 38 2.705864908070946E-4 0.0 0.0 33.6049480528055 0.0 39 2.705864908070946E-4 0.0 0.0 34.854895288439785 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGACATA 20 7.0344E-4 45.000004 39 TAACGAC 20 7.0344E-4 45.000004 19 ACGGATA 20 7.0344E-4 45.000004 40 TTACGAA 20 7.0344E-4 45.000004 31 TAACACG 25 3.89173E-5 45.0 34 CAACGTA 30 2.1662217E-6 44.999996 27 CCGGTAA 30 2.1662217E-6 44.999996 32 ACTTGAC 5650 0.0 43.725666 6 CTCAACT 5860 0.0 43.61775 2 TCAACTT 5800 0.0 43.603447 3 TTGACCC 5265 0.0 43.16239 8 CTTGACC 5910 0.0 43.134518 7 TTACACG 230 0.0 43.04348 34 CGAACGA 110 0.0 42.954544 22 CAACTTG 5790 0.0 42.784973 4 AACTTGA 5755 0.0 42.732407 5 GCTCAAC 6210 0.0 42.644928 1 TGCATTA 4375 0.0 42.48 15 CATTAGA 4285 0.0 42.47958 17 GCATTAG 4410 0.0 42.34694 16 >>END_MODULE