##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935304.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3063219 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.22037928075009 33.0 31.0 34.0 30.0 34.0 2 32.37418251845526 34.0 31.0 34.0 30.0 34.0 3 32.407271892737676 34.0 31.0 34.0 30.0 34.0 4 35.909507612743326 37.0 35.0 37.0 35.0 37.0 5 32.01992283281084 37.0 35.0 37.0 0.0 37.0 6 33.615069637528364 37.0 35.0 37.0 17.0 37.0 7 35.29186976184204 37.0 35.0 37.0 32.0 37.0 8 35.810901864998876 37.0 35.0 37.0 35.0 37.0 9 37.85121174816427 39.0 38.0 39.0 35.0 39.0 10 37.44152736059681 39.0 37.0 39.0 35.0 39.0 11 37.32032577494459 39.0 37.0 39.0 34.0 39.0 12 37.247294431119684 39.0 37.0 39.0 34.0 39.0 13 37.25310694403502 39.0 37.0 39.0 34.0 39.0 14 38.43656623963223 40.0 38.0 41.0 34.0 41.0 15 38.493024168366674 40.0 38.0 41.0 34.0 41.0 16 38.53920663197767 40.0 38.0 41.0 34.0 41.0 17 38.53851944637324 40.0 38.0 41.0 34.0 41.0 18 38.513291410114654 40.0 38.0 41.0 34.0 41.0 19 38.52946165455359 40.0 38.0 41.0 34.0 41.0 20 38.45608753406139 40.0 38.0 41.0 34.0 41.0 21 38.40826006890138 40.0 38.0 41.0 34.0 41.0 22 38.390058954322235 40.0 38.0 41.0 34.0 41.0 23 38.331387667679 40.0 38.0 41.0 34.0 41.0 24 38.311397258896605 40.0 37.0 41.0 34.0 41.0 25 38.214492662783826 40.0 37.0 41.0 34.0 41.0 26 38.171377560664126 40.0 37.0 41.0 34.0 41.0 27 38.15162252519327 40.0 37.0 41.0 34.0 41.0 28 38.137675105828215 40.0 37.0 41.0 34.0 41.0 29 38.082260523978206 40.0 37.0 41.0 34.0 41.0 30 37.99755845076699 40.0 37.0 41.0 34.0 41.0 31 37.82087764537893 40.0 37.0 41.0 33.0 41.0 32 37.817991792294315 40.0 37.0 41.0 33.0 41.0 33 37.760209113354286 40.0 37.0 41.0 33.0 41.0 34 37.76764149086304 40.0 37.0 41.0 33.0 41.0 35 37.67384636880354 40.0 37.0 41.0 33.0 41.0 36 37.63323647444078 40.0 37.0 41.0 33.0 41.0 37 37.6621067576298 40.0 37.0 41.0 33.0 41.0 38 37.66996385175203 40.0 37.0 41.0 33.0 41.0 39 37.5884685358768 39.0 36.0 41.0 33.0 41.0 40 37.54681790626135 39.0 36.0 41.0 33.0 41.0 41 37.51186382690888 39.0 36.0 41.0 33.0 41.0 42 37.46481332219472 39.0 36.0 41.0 33.0 41.0 43 37.42741736715527 39.0 36.0 41.0 33.0 41.0 44 37.43098061222524 39.0 36.0 41.0 33.0 41.0 45 37.44105596106579 39.0 36.0 41.0 33.0 41.0 46 37.31812449583265 39.0 36.0 41.0 32.0 41.0 47 37.250366036512574 39.0 35.0 41.0 32.0 41.0 48 37.222169880769215 39.0 35.0 41.0 32.0 41.0 49 37.199251506340225 39.0 35.0 41.0 32.0 41.0 50 37.14141169795565 39.0 35.0 41.0 32.0 41.0 51 36.406848808394045 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 6.0 10 10.0 11 15.0 12 23.0 13 20.0 14 38.0 15 59.0 16 88.0 17 154.0 18 233.0 19 426.0 20 746.0 21 1297.0 22 2309.0 23 3613.0 24 5833.0 25 9210.0 26 12795.0 27 16415.0 28 20864.0 29 27518.0 30 37188.0 31 50521.0 32 69367.0 33 101385.0 34 160522.0 35 216276.0 36 267626.0 37 433095.0 38 730426.0 39 894481.0 40 657.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.18842955727292 4.442940579827952 59.436462100816165 14.93216776208296 2 19.609665518528058 4.418652404545675 55.18325656768256 20.78842550924371 3 19.152825834522442 4.160296733599524 55.051467100458694 21.635410331419333 4 18.65668109266755 4.150601050724744 52.72747394162807 24.465243914979634 5 15.56447645434427 15.57635937881033 46.74807775741793 22.111086409427468 6 19.725719904453452 5.896868620885415 56.09164738139846 18.285764093262678 7 80.9937846428871 1.7227955298005138 11.300889685001302 5.982530142311079 8 82.76528710483971 1.8128641798056226 8.759967863871307 6.661880851483358 9 77.83282879872448 4.108031453186991 11.692895610793745 6.366244137294787 10 35.89713957767956 23.50429401227924 22.654664912955948 17.943901497085253 11 24.40791859804996 26.264984645237575 26.25669271442884 23.070404042283624 12 19.88966508760882 22.525748240657947 34.338452458018836 23.2461342137144 13 20.603064945731926 24.840013071216912 35.27573444797776 19.2811875350734 14 19.575159334020846 26.345912584114945 32.967313143461176 21.111614938403033 15 17.110007479060428 26.955565370938217 34.309234827806954 21.625192322194398 16 18.05489584649351 25.774814011012598 32.13358235242077 24.036707790073123 17 18.092209535132813 27.112002112810085 29.67998696795756 25.11580138409954 18 19.279130875069658 24.953553761582178 33.057283857275635 22.710031506072532 19 19.859631322474822 27.324784809705083 30.688174759950236 22.12740910786986 20 20.980576315307527 28.17232460362775 30.68928470344432 20.157814377620404 21 21.54661485189273 28.306236021649124 30.152235279292793 19.994913847165353 22 19.59615032421776 26.237562511854364 29.213908636633555 24.95237852729433 23 18.535403443240593 26.983607766862246 28.07970961266563 26.401279177231533 24 20.05432846949565 25.977901025032818 29.471480818054474 24.49628968741706 25 17.92206172656934 28.73953837450081 27.085265532761447 26.2531343661684 26 17.611408129813768 29.390095843620713 29.203657982011734 23.794838044553785 27 18.801822527217283 27.158946193530404 31.014628728798037 23.024602550454276 28 16.916812020296295 25.802595243761544 31.011266252918908 26.269326483023253 29 18.777632288125663 24.91196352595097 31.239784031112368 25.070620154811003 30 20.913261506931107 25.974048868200413 31.22006621139396 21.892623413474517 31 21.84659340386698 27.80767552042476 26.78956352777911 23.556167547929157 32 21.381331207465088 28.309010880384328 27.173734558319207 23.135923353831377 33 20.90506751231303 24.8867939249528 30.48570800847083 23.72243055426334 34 20.647952366448497 24.57140674564894 28.8568985763016 25.923742311600968 35 20.755029268230576 25.860508177835147 28.673039701046516 24.71142285288776 36 20.148934829667745 25.90281661219782 32.117227008581494 21.831021549552936 37 19.84575702879879 25.355255370249402 31.51821662114266 23.280770979809148 38 21.91106806271442 25.191310187094036 28.80358864318875 24.094033107002797 39 22.706571094002747 22.908711391513307 32.31802884481978 22.066688669664167 40 24.468965490224498 23.117315477607054 30.589357143580003 21.82436188858844 41 22.81224424371878 24.981465575918666 28.03567097226806 24.17061920809449 42 21.77908272310925 23.876255664384427 30.620239689033006 23.72442192347331 43 20.828971092174605 23.272479049000413 31.816922002638403 24.08162785618658 44 19.781608823920198 23.03890123428981 29.112087643749923 28.06740229804007 45 22.05490368138876 22.640660037692374 27.757009864459576 27.547426416459288 46 23.351807363430428 22.641900562773998 30.78715560330489 23.219136470490685 47 19.60982874551248 24.258598552698974 32.52532711503813 23.606245586750408 48 19.851861718016245 22.613629649071775 32.634754485395916 24.89975414751606 49 22.506128357130194 20.183702177350035 33.89698875594595 23.413180709573815 50 22.83039508438672 19.095794326164732 31.12944258964181 26.94436799980674 51 21.511553695638476 19.249750017873353 28.54947687383762 30.689219412650548 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 644.0 1 1181.5 2 1719.0 3 4010.0 4 6301.0 5 4486.5 6 2672.0 7 3052.5 8 3433.0 9 4327.0 10 5221.0 11 5600.5 12 5980.0 13 6590.5 14 7201.0 15 7472.0 16 7743.0 17 7819.5 18 7896.0 19 8015.0 20 8134.0 21 8818.0 22 9502.0 23 10361.5 24 11221.0 25 12855.0 26 20298.5 27 26108.0 28 28854.0 29 31600.0 30 37534.0 31 43468.0 32 53399.5 33 63331.0 34 69134.0 35 74937.0 36 86216.5 37 97496.0 38 108140.0 39 118784.0 40 135648.0 41 152512.0 42 179228.0 43 205944.0 44 234783.5 45 263623.0 46 322724.5 47 381826.0 48 427003.5 49 472181.0 50 433189.0 51 394197.0 52 313095.0 53 231993.0 54 186890.0 55 141787.0 56 115458.0 57 89129.0 58 75434.0 59 61739.0 60 52343.5 61 42948.0 62 36297.0 63 29646.0 64 24604.5 65 19563.0 66 15386.0 67 11209.0 68 8999.0 69 6789.0 70 5309.5 71 3830.0 72 3303.5 73 2777.0 74 2357.0 75 1324.5 76 712.0 77 602.5 78 493.0 79 398.5 80 304.0 81 209.5 82 115.0 83 80.0 84 45.0 85 38.5 86 32.0 87 19.0 88 6.0 89 4.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3063219.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.027127430638743 #Duplication Level Percentage of deduplicated Percentage of total 1 61.771645072523526 16.695101229752815 2 14.804861792288582 8.002657725063564 3 7.101968607506513 5.758374316904236 4 3.962382548024443 4.283672722175826 5 2.434129611287145 3.2893765593474407 6 1.596729115588374 2.5893000767530854 7 1.1386659480758814 2.154240877570315 8 0.8369986458555979 1.8097335248649051 9 0.6504516120954216 1.5821854746810624 >10 5.0374484325671265 29.300790868179345 >50 0.5140336076550476 9.024951897282932 >100 0.13367067780804193 6.861512966387857 >500 0.009522945181638303 1.8111851096561413 >1k 0.006602575325935676 3.5011624091014006 >5k 3.8091780726551977E-4 0.7053182681943571 >10k+ 5.078904096873597E-4 2.6304359740848375 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTGCT 22919 0.7481998512022809 Illumina Single End Adapter 2 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTGC 22385 0.7307672092658083 No Hit TCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTGC 18514 0.6043968779248236 No Hit GCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTGC 12833 0.41893837822238633 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCC 7508 0.24510163981093092 No Hit TCCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTG 7478 0.24412227790438754 No Hit TTCCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCT 5567 0.18173692445757225 No Hit CGTTCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTC 4558 0.1487977190008289 No Hit TGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTGCTT 4049 0.13218121198647567 Illumina Single End Adapter 2 (95% over 22bp) CGCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTG 4032 0.13162624023943442 No Hit TGCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTG 3781 0.12343224562135453 No Hit TTCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTG 3709 0.12108177704565033 No Hit TTTCCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTC 3655 0.11931892561387221 No Hit GCCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTCTTCTG 3562 0.11628290370358763 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCATCGTGGTTCGTATGCCGTC 3434 0.11210429290233574 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3104 0.10133131193035823 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.793619065434108E-5 0.0 0.0 0.7702354940995078 0.0 2 9.793619065434108E-5 0.0 0.0 2.6298152368472514 0.0 3 9.793619065434108E-5 0.0 0.0 3.678418030183281 0.0 4 1.3058158753912142E-4 0.0 0.0 4.955897701078506 0.0 5 1.3058158753912142E-4 0.0 0.0 7.063386587769272 0.0 6 1.3058158753912142E-4 0.0 0.0 8.567457958441757 0.0 7 1.3058158753912142E-4 0.0 0.0 9.85182580807967 0.0 8 1.3058158753912142E-4 0.0 0.0 11.796610036696691 0.0 9 1.3058158753912142E-4 0.0 0.0 12.602135204828645 0.0 10 1.3058158753912142E-4 0.0 0.0 14.294864324098278 0.0 11 1.3058158753912142E-4 0.0 0.0 17.830099643544912 0.0 12 1.3058158753912142E-4 0.0 0.0 20.62781015657059 0.0 13 1.3058158753912142E-4 0.0 0.0 21.519584463272132 0.0 14 1.3058158753912142E-4 0.0 0.0 21.805656076173463 0.0 15 1.3058158753912142E-4 0.0 0.0 22.207977947381497 0.0 16 1.3058158753912142E-4 0.0 0.0 23.313122568121965 0.0 17 1.3058158753912142E-4 0.0 0.0 25.084461803090147 0.0 18 1.3058158753912142E-4 0.0 0.0 26.955108335381833 0.0 19 1.3058158753912142E-4 0.0 0.0 28.297584991474654 0.0 20 1.6322698442390178E-4 0.0 0.0 29.56974346267766 0.0 21 2.285177781934625E-4 0.0 0.0 31.455765976902075 0.0 22 2.285177781934625E-4 0.0 0.0 33.388047018512225 0.0 23 2.285177781934625E-4 0.0 0.0 35.27371043337091 0.0 24 2.285177781934625E-4 0.0 0.0 36.68947600547006 0.0 25 2.6116317507824283E-4 0.0 0.0 37.93473466964001 0.0 26 2.6116317507824283E-4 0.0 0.0 38.96322789849501 0.0 27 2.6116317507824283E-4 0.0 0.0 40.010883975321384 0.0 28 2.6116317507824283E-4 0.0 0.0 41.106920530331 0.0 29 2.938085719630232E-4 0.0 0.0 42.22283813204345 0.0 30 2.938085719630232E-4 0.0 0.0 43.38883377257715 0.0 31 2.938085719630232E-4 0.0 0.0 44.49143205236061 0.0 32 2.938085719630232E-4 0.0 0.0 45.52935980091531 0.0 33 2.938085719630232E-4 0.0 0.0 46.515446659216984 0.0 34 2.938085719630232E-4 0.0 0.0 47.51031512928067 0.0 35 2.938085719630232E-4 0.0 0.0 48.51863350286088 0.0 36 2.938085719630232E-4 0.0 0.0 49.454022059800494 0.0 37 2.938085719630232E-4 0.0 0.0 50.39123875896565 0.0 38 2.938085719630232E-4 0.0 0.0 51.33446221115761 0.0 39 2.938085719630232E-4 0.0 0.0 52.26155883728848 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCGAAT 20 7.0351287E-4 45.0 27 TCGCGAT 25 3.892333E-5 45.0 11 CCCGATA 30 2.166691E-6 44.999996 30 TACGGGA 915 0.0 43.770493 4 CGCACGG 100 0.0 42.75 2 TTTACGG 1160 0.0 42.478447 2 TGTTACG 245 0.0 42.2449 1 TTACGGG 1905 0.0 42.047245 3 TTTTACG 830 0.0 41.746986 1 TACGGGT 505 0.0 41.435642 4 CGTTTTT 3680 0.0 41.392666 1 TTATGGG 6700 0.0 40.97015 3 GTTACGG 385 0.0 40.909092 2 TTTATGG 4085 0.0 40.758873 2 TTGTACG 205 0.0 40.609756 1 CTACGGG 795 0.0 40.18868 3 TACGGGG 1370 0.0 39.744526 4 TTCTACG 340 0.0 39.705883 1 GCGATGC 465 0.0 39.67742 9 TATGGGA 3485 0.0 39.57676 4 >>END_MODULE