##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935303.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1253326 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21568211303364 33.0 31.0 34.0 30.0 34.0 2 32.37118754418244 34.0 31.0 34.0 30.0 34.0 3 32.43680096000562 34.0 31.0 34.0 30.0 34.0 4 35.89811030809223 37.0 35.0 37.0 35.0 37.0 5 31.567195605931737 37.0 35.0 37.0 0.0 37.0 6 33.361166208951225 37.0 35.0 37.0 17.0 37.0 7 35.16989274937247 37.0 35.0 37.0 32.0 37.0 8 35.72744282014416 37.0 35.0 37.0 35.0 37.0 9 37.772059304602315 39.0 38.0 39.0 35.0 39.0 10 37.4795639761722 39.0 37.0 39.0 35.0 39.0 11 37.35816539352092 39.0 37.0 39.0 35.0 39.0 12 37.09427315798124 39.0 37.0 39.0 34.0 39.0 13 37.00458539916989 39.0 37.0 39.0 33.0 39.0 14 38.126508187015986 40.0 37.0 41.0 33.0 41.0 15 38.20978261043017 40.0 37.0 41.0 34.0 41.0 16 38.27916998450523 40.0 37.0 41.0 34.0 41.0 17 38.26825103763905 40.0 37.0 41.0 34.0 41.0 18 38.262707388181525 40.0 37.0 41.0 34.0 41.0 19 38.29236447660066 40.0 37.0 41.0 34.0 41.0 20 38.22371513875879 40.0 37.0 41.0 34.0 41.0 21 38.16343872224784 40.0 37.0 41.0 34.0 41.0 22 38.13058613640825 40.0 37.0 41.0 34.0 41.0 23 38.11005197370836 40.0 37.0 41.0 34.0 41.0 24 38.078824663335794 40.0 36.0 41.0 34.0 41.0 25 37.9831408588029 40.0 36.0 41.0 34.0 41.0 26 37.95267711672781 40.0 36.0 41.0 34.0 41.0 27 37.88941664020375 40.0 36.0 41.0 34.0 41.0 28 37.823625297807595 40.0 36.0 41.0 33.0 41.0 29 37.77600959367315 40.0 36.0 41.0 33.0 41.0 30 37.694364435111055 40.0 36.0 41.0 33.0 41.0 31 37.38336075370654 39.0 35.0 41.0 33.0 41.0 32 37.44951911952676 39.0 35.0 41.0 33.0 41.0 33 37.485348584486395 39.0 35.0 41.0 33.0 41.0 34 37.39281639413848 39.0 35.0 41.0 33.0 41.0 35 37.348794328051916 39.0 35.0 41.0 33.0 41.0 36 37.38078600459896 39.0 35.0 41.0 33.0 41.0 37 37.29243867916249 39.0 35.0 41.0 33.0 41.0 38 37.28163143507754 39.0 35.0 41.0 33.0 41.0 39 37.3032259763222 39.0 35.0 41.0 33.0 41.0 40 37.20909244681751 39.0 35.0 41.0 33.0 41.0 41 37.15522138693365 39.0 35.0 41.0 32.0 41.0 42 37.190006430888694 39.0 35.0 41.0 33.0 41.0 43 37.177498113020874 39.0 35.0 41.0 33.0 41.0 44 37.111775388047484 39.0 35.0 41.0 32.0 41.0 45 37.0604519494529 39.0 35.0 41.0 32.0 41.0 46 36.91756893258418 39.0 35.0 41.0 32.0 41.0 47 36.85233769984824 39.0 35.0 40.0 32.0 41.0 48 36.824409610907296 39.0 35.0 40.0 32.0 41.0 49 36.82018644789943 39.0 35.0 40.0 32.0 41.0 50 36.73147529054691 39.0 35.0 40.0 32.0 41.0 51 36.07570496423117 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 12.0 11 16.0 12 15.0 13 21.0 14 17.0 15 21.0 16 41.0 17 67.0 18 137.0 19 239.0 20 444.0 21 672.0 22 1115.0 23 1763.0 24 2613.0 25 4020.0 26 5640.0 27 7455.0 28 9643.0 29 12661.0 30 16831.0 31 22803.0 32 31564.0 33 48741.0 34 82167.0 35 115840.0 36 111200.0 37 173247.0 38 271164.0 39 332850.0 40 299.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.851575727304787 4.385770342273279 55.53670792754638 16.22594600287555 2 19.536018561810735 4.477605985992471 53.577840083106864 22.408535369089925 3 21.14916629831345 4.518058350341411 51.12197464985167 23.21080070149347 4 19.286043694936513 4.724947858737472 50.70691902984539 25.28208941648063 5 15.7826455367558 16.944753400152873 44.37847774641235 22.89412331667898 6 21.668664018778834 6.249451459556412 52.874671075203096 19.207213446461655 7 81.3943858182149 2.1363156912088317 10.754185263849948 5.715113226726327 8 82.45221115655464 2.6767975770070995 8.205766097567592 6.665225168870668 9 77.29976079647275 4.991279204293217 10.903946778412003 6.805013220822037 10 39.28140005074498 25.7021716616427 18.106542112746403 16.909886174865917 11 29.64719474422457 24.656154903034007 24.859533752591105 20.83711660015032 12 25.491133192800596 22.099597391261334 31.07874567351192 21.330523742426152 13 22.50037101280912 24.916422383322455 31.82500003989385 20.758206563974575 14 19.411310385326722 26.969359927105955 31.94595819443624 21.67337149313108 15 17.755635804252044 24.739453262758452 36.042498120999646 21.462412811989857 16 19.702455705857854 24.5440531832899 31.841356518575374 23.91213459227687 17 18.755934210253358 24.38878631736675 29.449560609131225 27.40571886324867 18 20.2161289241586 23.439791403034803 32.70649455927668 23.63758511352992 19 21.603716830258048 24.700357289324565 30.350443539829225 23.345482340588163 20 24.262083448360602 26.761991692504584 29.069771152916317 19.906153706218493 21 23.013086778699236 26.835077226515686 29.91679738551662 20.235038609268457 22 21.85967577469868 24.01825223445456 29.066340281778245 25.055731709068514 23 21.238129584800763 24.821873957773157 27.850056569479925 26.08993988794615 24 22.178268064334418 23.356732406413016 29.938659215559237 24.526340313693325 25 20.28642188863871 25.61225092274476 26.75520973792932 27.346117450687213 26 19.94724437217452 26.59691093937252 27.69734290998511 25.758501778467853 27 19.956978471682547 26.16414244976965 28.43051209342182 25.448366985125976 28 18.049972632818594 26.382601174794107 29.904350504178485 25.663075688208814 29 20.30317730582466 25.219934797490833 29.163521701456762 25.313366195227736 30 22.78529289267118 26.069913175023895 27.363590957181135 23.78120297512379 31 22.239305655511814 30.66672198613928 24.015220301820914 23.07875205652799 32 22.44340259437688 30.50810403677894 23.616680735897923 23.431812632946254 33 22.431992953150257 27.44880422172683 24.594558797950413 25.5246440271725 34 20.028548039376826 27.241914713330768 27.02369535140897 25.705841895883434 35 20.06876104062311 27.66135865688576 25.549617577549654 26.720262724941474 36 23.376759119335272 26.915104290503827 25.11948208207601 24.588654508084886 37 19.44282652717649 30.12376668161356 26.7805822268109 23.652824564399047 38 19.42758707630736 32.28250271677122 24.25609937079419 24.033810836127234 39 22.06201738414427 27.295133109821386 26.362015947965656 24.28083355806869 40 23.574393254428617 26.313185875023738 26.263717500474737 23.84870337007291 41 19.24614984449377 27.611411556131443 24.739373475057565 28.403065124317216 42 20.43977384974061 25.456505330616295 25.311132139602943 28.792588680040147 43 21.184352674403947 24.06085886672741 26.54145848725711 28.213329971611532 44 20.645147391819847 24.228492826287816 26.34222859814605 28.784131183746286 45 22.038559800083938 25.014481467710713 25.077673326812018 27.869285405393327 46 23.02912410657722 25.366744167120125 27.533299396964555 24.070832329338096 47 18.78545565958099 26.841061304082096 28.83415807220149 25.539324964135428 48 18.698726428718466 25.778927429894537 29.209240054064146 26.31310608732285 49 21.858798109988943 23.181757978371152 29.714854714575456 25.24458919706445 50 21.28672029464002 23.81351699398241 27.714178114871952 27.18558459650562 51 19.600646599527977 23.314684288046365 25.534138763577875 31.55053034884779 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 521.0 1 821.0 2 1121.0 3 1682.0 4 2243.0 5 1634.5 6 1026.0 7 1106.0 8 1186.0 9 1610.5 10 2035.0 11 2080.5 12 2126.0 13 2130.5 14 2135.0 15 2185.5 16 2236.0 17 2407.0 18 2578.0 19 2533.5 20 2489.0 21 2894.5 22 3300.0 23 3485.5 24 3671.0 25 4544.0 26 7360.5 27 9304.0 28 10139.5 29 10975.0 30 13259.0 31 15543.0 32 17988.5 33 20434.0 34 23983.5 35 27533.0 36 29951.0 37 32369.0 38 36630.5 39 40892.0 40 46782.0 41 52672.0 42 63591.0 43 74510.0 44 85704.5 45 96899.0 46 114733.0 47 132567.0 48 150818.0 49 169069.0 50 160754.5 51 152440.0 52 129095.5 53 105751.0 54 89753.5 55 73756.0 56 63810.5 57 53865.0 58 48446.0 59 43027.0 60 38882.0 61 34737.0 62 30524.5 63 26312.0 64 22005.5 65 17699.0 66 14469.5 67 11240.0 68 9090.0 69 6940.0 70 5660.0 71 4380.0 72 3846.0 73 3312.0 74 2893.5 75 1890.0 76 1305.0 77 1116.0 78 927.0 79 604.0 80 281.0 81 151.0 82 21.0 83 13.5 84 6.0 85 3.0 86 0.0 87 0.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1253326.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.38911682873252 #Duplication Level Percentage of deduplicated Percentage of total 1 65.50635783051648 17.286549298142567 2 12.872717132421046 6.7939927262137125 3 5.96029054800435 4.718604108134308 4 3.382279393295335 3.570214642283405 5 2.270947861436699 2.996415421370666 6 1.5875399660095897 2.5136266579985467 7 1.179203226116319 2.178269218916128 8 0.8862605420055347 1.8710106386943888 9 0.6858583724528273 1.6289277046759798 >10 4.412065080612153 24.881187389144667 >50 1.0807248385634474 19.573258375980856 >100 0.1637171805892336 7.1106319569942915 >500 0.008125668884498899 1.508946401699305 >1k 0.0027085562948329666 1.078420167824993 >5k 0.0012038027977035407 2.289945291926198 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTGCT 7873 0.6281685690714147 Illumina Single End Adapter 1 (96% over 25bp) CCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTGC 7634 0.6090993085597841 Illumina Single End Adapter 1 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTGC 7478 0.5966524272216487 Illumina Single End Adapter 1 (95% over 24bp) GCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTGC 5849 0.46667826247919536 Illumina Single End Adapter 1 (95% over 24bp) TCCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTG 2447 0.19524050406677912 Illumina Single End Adapter 1 (95% over 23bp) GCCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTG 1646 0.1313305556575065 Illumina Single End Adapter 1 (95% over 23bp) TTCCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCT 1612 0.12861777382740006 Illumina Single End Adapter 1 (95% over 22bp) TGCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTG 1494 0.11920282512291294 Illumina Single End Adapter 1 (95% over 23bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 1374 0.10962830101665488 No Hit TGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTGCTT 1336 0.10659636838300648 Illumina Single End Adapter 1 (96% over 26bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCC 1313 0.10476125126264037 No Hit CGCTGTCTCTTATACACATCTGACGCGCAAGAACTCGTATGCCGTCTTCTG 1278 0.10196868173164844 Illumina Single End Adapter 1 (95% over 23bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.97877008854839E-5 0.0 0.0 0.6623177050504019 0.0 2 7.97877008854839E-5 0.0 0.0 2.49216883715809 0.0 3 7.97877008854839E-5 0.0 0.0 3.4391690589678983 0.0 4 7.97877008854839E-5 0.0 0.0 4.509840217150207 0.0 5 7.97877008854839E-5 0.0 0.0 6.212190603242892 0.0 6 7.97877008854839E-5 0.0 0.0 7.355548356931876 0.0 7 7.97877008854839E-5 0.0 0.0 8.37260218011914 0.0 8 7.97877008854839E-5 0.0 0.0 9.897265356339851 0.0 9 7.97877008854839E-5 0.0 0.0 10.569396948599167 0.0 10 7.97877008854839E-5 0.0 0.0 11.962171055256174 0.0 11 7.97877008854839E-5 0.0 0.0 14.692984905762746 0.0 12 7.97877008854839E-5 0.0 0.0 16.98105680405577 0.0 13 7.97877008854839E-5 0.0 0.0 17.72268348378634 0.0 14 7.97877008854839E-5 0.0 0.0 17.980397757646454 0.0 15 7.97877008854839E-5 0.0 0.0 18.350133963549787 0.0 16 7.97877008854839E-5 0.0 0.0 19.34955470484136 0.0 17 7.97877008854839E-5 0.0 0.0 20.752860788015248 0.0 18 7.180893079693552E-4 0.0 0.0 22.392657616613715 0.0 19 7.180893079693552E-4 0.0 0.0 23.494047039636936 0.0 20 7.180893079693552E-4 0.0 0.0 24.589452385093743 0.0 21 7.180893079693552E-4 0.0 0.0 26.04246620591929 0.0 22 7.180893079693552E-4 0.0 0.0 27.460373438355223 0.0 23 7.978770088548391E-4 0.0 0.0 28.801125964034895 0.0 24 7.978770088548391E-4 0.0 0.0 29.872116273020747 0.0 25 8.776647097403229E-4 0.0 0.0 30.817201590009304 0.0 26 9.574524106258068E-4 0.0 0.0 31.63965321073687 0.0 27 9.574524106258068E-4 0.0 0.0 32.426359941467744 0.0 28 9.574524106258068E-4 0.0 0.0 33.25519457826615 0.0 29 9.574524106258068E-4 0.0 0.0 34.11155597187005 0.0 30 9.574524106258068E-4 0.0 0.0 35.08017866061982 0.0 31 9.574524106258068E-4 0.0 0.0 35.95066247728045 0.0 32 0.0011170278123967747 0.0 0.0 36.76074700437077 0.0 33 0.0011968155132822587 0.0 0.0 37.539235601910434 0.0 34 0.0011968155132822587 0.0 0.0 38.34166050971575 0.0 35 0.0011968155132822587 0.0 0.0 39.215575197514454 0.0 36 0.0011968155132822587 0.0 0.0 39.979462645792076 0.0 37 0.0011968155132822587 0.0 0.0 40.78204712899916 0.0 38 0.0011968155132822587 0.0 0.0 41.603461509615215 0.0 39 0.0011968155132822587 0.0 0.0 42.480168766944914 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACCGAAC 30 2.1656597E-6 45.000004 11 ATTCGTT 30 2.1656597E-6 45.000004 11 ATTCGAT 30 2.1656597E-6 45.000004 14 CACGATA 20 7.03353E-4 45.000004 20 TGACGTA 20 7.03353E-4 45.000004 25 ACGATAC 20 7.03353E-4 45.000004 21 CGCTATC 20 7.03353E-4 45.000004 1 CTACGAA 80 0.0 45.000004 11 TACGAAT 80 0.0 45.000004 12 TACGAAG 20 7.03353E-4 45.000004 37 CGAGGAT 20 7.03353E-4 45.000004 37 GGTATCG 20 7.03353E-4 45.000004 20 AGCGAAT 20 7.03353E-4 45.000004 15 CCCGGTT 20 7.03353E-4 45.000004 3 CAATCGG 20 7.03353E-4 45.000004 20 GTGGTCG 30 2.1656597E-6 45.000004 18 CGTCATT 20 7.03353E-4 45.000004 21 AATCGAC 20 7.03353E-4 45.000004 19 CGGACAA 25 3.891009E-5 45.0 11 GGTCGAC 35 1.2120472E-7 45.0 20 >>END_MODULE