##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935301.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1088883 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.30424940053247 33.0 31.0 34.0 30.0 34.0 2 32.45837064220858 34.0 31.0 34.0 30.0 34.0 3 32.518472599902836 34.0 31.0 34.0 30.0 34.0 4 35.959288555336066 37.0 35.0 37.0 35.0 37.0 5 31.84131536629739 37.0 35.0 37.0 0.0 37.0 6 33.51213215744942 37.0 35.0 37.0 17.0 37.0 7 35.24506673352417 37.0 35.0 37.0 32.0 37.0 8 35.77411439061864 37.0 35.0 37.0 35.0 37.0 9 37.82439251967383 39.0 38.0 39.0 35.0 39.0 10 37.53976689873935 39.0 37.0 39.0 35.0 39.0 11 37.4177840961793 39.0 37.0 39.0 35.0 39.0 12 37.08236330257704 39.0 37.0 39.0 34.0 39.0 13 36.92093640914589 39.0 35.0 39.0 33.0 39.0 14 37.95825997834478 40.0 37.0 41.0 33.0 41.0 15 38.12320607448183 40.0 37.0 41.0 33.0 41.0 16 38.248888999093566 40.0 37.0 41.0 34.0 41.0 17 38.26843563541721 40.0 37.0 41.0 34.0 41.0 18 38.2634415267756 40.0 37.0 41.0 34.0 41.0 19 38.288524111405906 40.0 37.0 41.0 34.0 41.0 20 38.20303099598396 40.0 37.0 41.0 34.0 41.0 21 38.15014744467496 40.0 36.0 41.0 34.0 41.0 22 38.14932182796499 40.0 36.0 41.0 34.0 41.0 23 38.110506822128734 40.0 36.0 41.0 34.0 41.0 24 38.063953611177695 40.0 36.0 41.0 34.0 41.0 25 37.976153544503866 40.0 36.0 41.0 34.0 41.0 26 37.899018535508404 40.0 36.0 41.0 34.0 41.0 27 37.870375421418096 40.0 36.0 41.0 34.0 41.0 28 37.8450981418573 40.0 36.0 41.0 34.0 41.0 29 37.798003091241206 40.0 36.0 41.0 34.0 41.0 30 37.7398499195965 40.0 36.0 41.0 34.0 41.0 31 37.53628718604295 40.0 35.0 41.0 33.0 41.0 32 37.55658596929147 39.0 35.0 41.0 33.0 41.0 33 37.58395989284432 40.0 35.0 41.0 33.0 41.0 34 37.51123582607131 40.0 35.0 41.0 33.0 41.0 35 37.42144748333843 39.0 35.0 41.0 33.0 41.0 36 37.41963920825286 39.0 35.0 41.0 33.0 41.0 37 37.41497938713342 39.0 35.0 41.0 33.0 41.0 38 37.410416913479224 39.0 35.0 41.0 33.0 41.0 39 37.39423060145121 39.0 35.0 41.0 33.0 41.0 40 37.26917676187433 39.0 35.0 41.0 33.0 41.0 41 37.215983719095625 39.0 35.0 41.0 33.0 41.0 42 37.21874434627044 39.0 35.0 41.0 33.0 41.0 43 37.18531100219216 39.0 35.0 41.0 33.0 41.0 44 37.13193795843998 39.0 35.0 41.0 33.0 41.0 45 37.111817339420305 39.0 35.0 41.0 33.0 41.0 46 37.00026081773708 39.0 35.0 41.0 33.0 41.0 47 36.9568006847384 39.0 35.0 41.0 32.0 41.0 48 36.94333091801415 39.0 35.0 41.0 32.0 41.0 49 36.942622852960326 39.0 35.0 41.0 32.0 41.0 50 36.84697529486639 39.0 35.0 41.0 32.0 41.0 51 36.19915546482037 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 12.0 11 7.0 12 21.0 13 18.0 14 21.0 15 27.0 16 55.0 17 92.0 18 139.0 19 240.0 20 374.0 21 649.0 22 1004.0 23 1655.0 24 2524.0 25 3546.0 26 5063.0 27 6391.0 28 8223.0 29 10792.0 30 14276.0 31 19188.0 32 26766.0 33 42726.0 34 75007.0 35 102038.0 36 86954.0 37 136049.0 38 221264.0 39 323367.0 40 387.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.76314351495983 4.902730596400164 55.31071749673748 17.023408391902528 2 18.668396880105576 5.012292413418154 53.92884267639406 22.390468030082204 3 20.786255272605043 4.513983596033733 52.62824380580834 22.071517325552882 4 19.048786692417828 4.6746987509218165 50.90436713586308 25.372147420797276 5 15.857993925885516 16.769478447179356 44.308249830330716 23.06427779660441 6 21.290349835565436 6.181104856995655 53.04013378847865 19.488411518960255 7 82.54853827270698 2.317053347329327 9.51479635553131 5.619612024432377 8 83.66711575072804 2.7759639924583266 7.599898244347648 5.957022012465986 9 78.93391668342696 4.819617902015184 10.071972838220452 6.174492576337403 10 41.16172260931615 25.571342375627133 17.389471596121897 15.877463418934818 11 31.01324935736897 24.770797229821753 23.745801890561243 20.470151522248027 12 28.932401369109446 20.80407169548978 29.660762451062233 20.602764484338536 13 24.25118217476074 25.7328840655975 30.066958525387943 19.94897523425382 14 18.655355993251803 27.823191288687582 31.412465802110972 22.108986915949647 15 16.669835051148745 24.572428810074175 37.18406844445179 21.573667694325284 16 19.731963856539224 23.26530949606156 33.56586520314855 23.436861444250667 17 19.704137175435747 23.56616826601205 28.91081961973876 27.818874938813444 18 20.87166389777414 22.50333598742932 32.74300361012156 23.881996504674973 19 23.358616123128012 24.185243042640945 29.45670012297005 22.99944071126099 20 23.893384321364188 26.64877677399684 28.868850005005132 20.588988899633843 21 22.13460950350038 27.271616877111683 29.79778360025825 20.795990019129697 22 21.649617084663824 24.44642812864192 28.527307341560114 25.376647445134143 23 20.977368551074818 25.286279609471357 28.34620432130908 25.39014751814474 24 21.760280948458192 24.65342924813777 29.849304287053798 23.73698551635024 25 20.833092260601003 26.640511423174022 26.87864536410248 25.647750952122493 26 18.61393740190636 29.143627001248067 25.866690911695745 26.375744685149826 27 19.422931572997282 26.687164736707246 29.117269715846422 24.772633974449047 28 16.79996840799241 25.711945176846363 32.009315968749625 25.4787704464116 29 18.442844639874075 24.985237165058138 29.71439539417917 26.857522800888617 30 22.373937328436572 25.43597429659569 28.082815141755358 24.107273233212386 31 22.03827224779889 26.264897146892736 26.54839868011531 25.148431925193066 32 22.29973284549396 26.017671320059183 26.649511471847752 25.033084362599105 33 23.1663089606505 24.503367212087984 26.28813196642798 26.042191860833537 34 19.332196388409038 24.26762103917501 29.394526317336204 27.005656255079746 35 18.31179291071676 25.35056567142659 28.80805375784175 27.529587660014897 36 21.904924587857465 25.196279122734033 28.390745378520926 24.50805091088758 37 19.02656208242759 25.610740547882553 30.49694044263709 24.865756927052768 38 19.621391829976222 26.040355116206243 28.097876447699154 26.24037660611838 39 21.433248567568782 23.465606497667792 29.046463210464303 26.054681724299122 40 22.99925703679826 22.34601881010173 28.933227904191728 25.721496248908288 41 18.4684672274248 22.988512080728597 28.633746692711703 29.909273999134893 42 19.035837642795414 23.34484053842332 30.520726285560524 27.09859553322074 43 20.163323332258837 22.917430063652386 30.7190947053081 26.20015189878068 44 19.973220263334078 23.56809684787071 28.21744852293589 28.241234365859324 45 20.155333493130115 24.245947452572956 25.42091299065189 30.17780606364504 46 21.70416840009441 23.760312173116855 28.794094498674326 25.74142492811441 47 17.91726016477436 23.639454376641016 32.141194232989214 26.302091225595404 48 17.96455633892714 23.208737761540952 31.85512125728843 26.971584642243474 49 21.306145839360152 20.527549791850916 32.398613992504245 25.767690376284687 50 20.24496663094198 21.47347327490649 29.70080348393721 28.58075661021432 51 18.853448901305285 21.876271371671706 28.17437686142588 31.09590286559713 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 300.0 1 597.0 2 894.0 3 1328.0 4 1762.0 5 1372.0 6 982.0 7 1086.5 8 1191.0 9 1472.5 10 1754.0 11 1977.5 12 2201.0 13 2289.0 14 2377.0 15 2449.0 16 2521.0 17 2515.5 18 2510.0 19 2442.5 20 2375.0 21 2560.5 22 2746.0 23 3410.5 24 4075.0 25 4544.5 26 8060.5 27 11107.0 28 11104.5 29 11102.0 30 13315.0 31 15528.0 32 19217.5 33 22907.0 34 24544.0 35 26181.0 36 28583.5 37 30986.0 38 34315.5 39 37645.0 40 42520.5 41 47396.0 42 55191.0 43 62986.0 44 71775.0 45 80564.0 46 93273.5 47 105983.0 48 119834.5 49 133686.0 50 127184.0 51 120682.0 52 101394.0 53 82106.0 54 70989.5 55 59873.0 56 54188.5 57 48504.0 58 45364.0 59 42224.0 60 37991.5 61 33759.0 62 29165.5 63 24572.0 64 22540.0 65 20508.0 66 17361.5 67 14215.0 68 11803.0 69 9391.0 70 8062.5 71 6734.0 72 5348.0 73 3962.0 74 3427.0 75 2046.0 76 1200.0 77 996.0 78 792.0 79 597.5 80 403.0 81 309.5 82 216.0 83 143.5 84 71.0 85 37.0 86 3.0 87 2.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1088883.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.015447534155342 #Duplication Level Percentage of deduplicated Percentage of total 1 65.75683612071252 16.449366839897355 2 12.912419980006314 6.460199290976543 3 5.867956232633822 4.403686538105137 4 3.3820072225300466 3.384096969413393 5 2.094893488709341 2.6202349078226086 6 1.4762495424575224 2.215742578600019 7 1.0681539103343851 1.8704243671660876 8 0.7902064642703436 1.5813894678484146 9 0.6392160967262079 1.4391249057577822 >10 4.4095929932535025 23.26756997110008 >50 1.366897807521582 24.088817450930144 >100 0.22301624619119215 8.111040043750759 >500 0.008861572696335385 1.4719300135190678 >1k 0.002584625369764487 1.144680513148959 >5k 0.0011076965870419231 1.4916961419636638 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGCCGTCTTCTGC 5463 0.5017067949449114 TruSeq Adapter, Index 13 (95% over 21bp) CTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGCCGTCTTCTGCT 5368 0.4929822579652726 TruSeq Adapter, Index 16 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGCCGTCTTCTGC 5319 0.48848223362840637 TruSeq Adapter, Index 13 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGCCGTCTTCTGC 3687 0.3386038720413488 TruSeq Adapter, Index 13 (95% over 21bp) AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 1810 0.16622538876995968 No Hit TCCTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGCCGTCTTCTG 1809 0.16613355153859505 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 1467 0.1347252184118955 No Hit TTCCTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGCCGTCTTCT 1315 0.12076595924447346 No Hit GCCTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGCCGTCTTCTG 1163 0.10680670007705143 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACTCGCTTTCGTATGCC 1142 0.10487811821839445 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.183723136461861E-5 0.0 0.0 0.5078598894463409 0.0 2 9.183723136461861E-5 0.0 0.0 1.9433676529066943 0.0 3 9.183723136461861E-5 0.0 0.0 2.7088309763307903 0.0 4 9.183723136461861E-5 0.0 0.0 3.5791724179732807 0.0 5 9.183723136461861E-5 0.0 0.0 5.07584377752247 0.0 6 9.183723136461861E-5 0.0 0.0 6.071726714440395 0.0 7 9.183723136461861E-5 0.0 0.0 6.960619276818538 0.0 8 9.183723136461861E-5 0.0 0.0 8.314667416058475 0.0 9 9.183723136461861E-5 0.0 0.0 8.933283006530546 0.0 10 9.183723136461861E-5 0.0 0.0 10.106595474444912 0.0 11 9.183723136461861E-5 0.0 0.0 12.525771823051697 0.0 12 9.183723136461861E-5 0.0 0.0 14.56712980182444 0.0 13 9.183723136461861E-5 0.0 0.0 15.20962307245131 0.0 14 9.183723136461861E-5 0.0 0.0 15.424154844919059 0.0 15 9.183723136461861E-5 0.0 0.0 15.77331999856734 0.0 16 9.183723136461861E-5 0.0 0.0 16.574967191149096 0.0 17 9.183723136461861E-5 0.0 0.0 17.82119842076697 0.0 18 9.183723136461861E-5 0.0 0.0 19.22842031696702 0.0 19 9.183723136461861E-5 0.0 0.0 20.08562903452437 0.0 20 9.183723136461861E-5 0.0 0.0 21.00666462788013 0.0 21 9.183723136461861E-5 0.0 0.0 22.283936841699244 0.0 22 9.183723136461861E-5 0.0 0.0 23.50206587851955 0.0 23 9.183723136461861E-5 0.0 0.0 24.6639905297447 0.0 24 1.8367446272923721E-4 0.0 0.0 25.54617897423323 0.0 25 1.8367446272923721E-4 0.0 0.0 26.3306526045498 0.0 26 1.8367446272923721E-4 0.0 0.0 27.038809495602376 0.0 27 1.8367446272923721E-4 0.0 0.0 27.739343896451686 0.0 28 1.8367446272923721E-4 0.0 0.0 28.45806206911119 0.0 29 1.8367446272923721E-4 0.0 0.0 29.24923981731738 0.0 30 1.8367446272923721E-4 0.0 0.0 30.087438227982254 0.0 31 2.7551169409385584E-4 0.0 0.0 30.82939122017701 0.0 32 2.7551169409385584E-4 0.0 0.0 31.489058053069062 0.0 33 2.7551169409385584E-4 0.0 0.0 32.19932720044302 0.0 34 2.7551169409385584E-4 0.0 0.0 32.9269535845449 0.0 35 2.7551169409385584E-4 0.0 0.0 33.74347840860772 0.0 36 2.7551169409385584E-4 0.0 0.0 34.396900309766984 0.0 37 2.7551169409385584E-4 0.0 0.0 35.085404033307526 0.0 38 2.7551169409385584E-4 0.0 0.0 35.78575475969411 0.0 39 2.7551169409385584E-4 0.0 0.0 36.74021910526659 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAGCGAA 20 7.033124E-4 45.0 29 TCGCACA 20 7.033124E-4 45.0 31 ATAGGTG 35 1.2118471E-7 45.0 24 GTCGACT 25 3.89067E-5 45.0 10 CAAGTCG 25 3.89067E-5 45.0 43 GGCCGTA 20 7.033124E-4 45.0 9 CACGATA 25 3.89067E-5 45.0 20 TACGGTA 25 3.89067E-5 45.0 13 CACGAAA 25 3.89067E-5 45.0 35 CTAACCG 20 7.033124E-4 45.0 15 TAACCGG 20 7.033124E-4 45.0 16 CGTAGTG 20 7.033124E-4 45.0 12 CTACGCG 40 6.8139343E-9 45.0 43 AGGCACG 40 6.8139343E-9 45.0 10 TGCGAAC 25 3.89067E-5 45.0 10 TCGCTAA 20 7.033124E-4 45.0 20 GGAACGT 20 7.033124E-4 45.0 8 ACTACGC 40 6.8139343E-9 45.0 42 CGCAGAT 20 7.033124E-4 45.0 24 GCGATAG 20 7.033124E-4 45.0 9 >>END_MODULE