##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935300.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2657748 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31058512695711 33.0 31.0 34.0 30.0 34.0 2 32.47845807804201 34.0 31.0 34.0 31.0 34.0 3 32.47859879868219 34.0 31.0 34.0 30.0 34.0 4 35.99534982248129 37.0 35.0 37.0 35.0 37.0 5 31.733741874699934 37.0 35.0 37.0 0.0 37.0 6 33.52811967124046 37.0 35.0 37.0 17.0 37.0 7 35.35322686725754 37.0 35.0 37.0 32.0 37.0 8 35.88581874579531 37.0 35.0 37.0 35.0 37.0 9 37.95703053863647 39.0 38.0 39.0 35.0 39.0 10 37.59344640650656 39.0 37.0 39.0 35.0 39.0 11 37.44977514798243 39.0 37.0 39.0 35.0 39.0 12 37.37122932648242 39.0 37.0 39.0 35.0 39.0 13 37.38497818453819 39.0 37.0 39.0 35.0 39.0 14 38.619057186761125 40.0 38.0 41.0 35.0 41.0 15 38.697968355163844 40.0 38.0 41.0 35.0 41.0 16 38.73398079878152 40.0 38.0 41.0 35.0 41.0 17 38.72970424585024 40.0 38.0 41.0 35.0 41.0 18 38.64306886883181 40.0 38.0 41.0 35.0 41.0 19 38.595085011822036 40.0 38.0 41.0 35.0 41.0 20 38.45649738048905 40.0 37.0 41.0 34.0 41.0 21 38.407003598535304 40.0 37.0 41.0 34.0 41.0 22 38.382798519648965 40.0 37.0 41.0 34.0 41.0 23 38.32227509906883 40.0 37.0 41.0 34.0 41.0 24 38.303955830274354 40.0 37.0 41.0 34.0 41.0 25 38.216093474625886 40.0 37.0 41.0 34.0 41.0 26 38.13705663591883 40.0 37.0 41.0 34.0 41.0 27 38.09509291324836 40.0 37.0 41.0 34.0 41.0 28 38.05640226236648 40.0 37.0 41.0 34.0 41.0 29 37.986785805125244 40.0 37.0 41.0 34.0 41.0 30 37.90873137709068 40.0 36.0 41.0 34.0 41.0 31 37.6255657044987 40.0 36.0 41.0 33.0 41.0 32 37.524832677891204 40.0 36.0 41.0 33.0 41.0 33 37.396460085756814 40.0 36.0 41.0 33.0 41.0 34 37.26390726284057 40.0 36.0 41.0 33.0 41.0 35 37.132223596819564 40.0 36.0 41.0 32.0 41.0 36 37.074890094922466 40.0 36.0 41.0 32.0 41.0 37 37.01873729187267 40.0 36.0 41.0 32.0 41.0 38 37.01620018150705 40.0 36.0 41.0 32.0 41.0 39 37.009711605464474 40.0 36.0 41.0 32.0 41.0 40 36.980461277743416 40.0 36.0 41.0 31.0 41.0 41 36.914220987091326 40.0 36.0 41.0 31.0 41.0 42 36.83938883596188 40.0 35.0 41.0 31.0 41.0 43 36.80203126857776 39.0 35.0 41.0 31.0 41.0 44 36.78333724642065 39.0 35.0 41.0 31.0 41.0 45 36.78474181901369 39.0 35.0 41.0 31.0 41.0 46 36.70629231966311 39.0 35.0 41.0 31.0 41.0 47 36.64445199469626 39.0 35.0 41.0 31.0 41.0 48 36.5874819584099 39.0 35.0 41.0 31.0 41.0 49 36.563029301498865 39.0 35.0 41.0 31.0 41.0 50 36.51828277173005 39.0 35.0 41.0 31.0 41.0 51 35.893321338215664 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 11.0 11 12.0 12 16.0 13 14.0 14 18.0 15 40.0 16 100.0 17 180.0 18 350.0 19 652.0 20 1235.0 21 2218.0 22 3694.0 23 6470.0 24 11583.0 25 20098.0 26 26946.0 27 28526.0 28 27020.0 29 27857.0 30 33080.0 31 41835.0 32 55603.0 33 80097.0 34 126996.0 35 183430.0 36 215006.0 37 339403.0 38 570366.0 39 854055.0 40 830.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 21.728433244987862 4.20626786286736 57.26615164417394 16.79914724797084 2 23.604419982631914 4.136923440446574 52.04199194205019 20.216664634871325 3 18.075227598703865 4.084284890817338 56.04850422237172 21.791983288107076 4 16.31595621556295 3.710208793309223 56.26519143274682 23.708643558381006 5 14.522407692527658 16.324121022760625 48.5529102081913 20.600561076520425 6 18.87880265548126 5.726013150983464 57.852399851302685 17.542784342232597 7 80.59785954123566 1.3608889932378843 13.29001094159416 4.7512405239322915 8 83.19272557067112 1.6693832522872747 10.743080231835373 4.394810945206242 9 78.5066153751221 3.7784244405413907 12.607478210876275 5.107481973460238 10 35.949909472229876 26.875572853408226 21.700891130385575 15.47362654397633 11 22.93994765493192 25.845753622992095 30.257496196027617 20.956802526048367 12 20.018903221825397 22.10081617971305 36.118285104532106 21.761995493929447 13 20.806336793405546 23.912387479926615 36.95549766193032 18.325778064737513 14 19.222815707132504 26.378836518736914 35.02943093175124 19.36891684237934 15 17.087737437860927 26.359120578775713 36.40864370888436 20.144498274478995 16 18.208310193441967 26.761039797603082 34.47693310276219 20.55371690619276 17 19.34446004662594 26.656515215137027 31.400004816107476 22.599019922129564 18 19.507831442258635 25.739949761978938 33.938582589470485 20.813636206291942 19 19.967581576582884 28.700727081724832 30.895969068549768 20.435722273142527 20 20.7827077661238 28.64774989953901 31.099186228340685 19.470356105996505 21 20.614934147255497 28.38455715139283 32.05680147252486 18.94370722882681 22 20.101905824028464 25.54497266106493 31.31538430280072 23.03773721210589 23 18.65594480740838 27.35914014421232 30.329624930580323 23.65529011779898 24 19.664881696835064 26.92087436431144 31.572368787409495 21.841875151444004 25 19.255362058404334 28.96749428463496 29.174135395831357 22.603008261129347 26 18.823868929635164 30.217086044275078 29.66255641994651 21.296488606143246 27 20.194992151249856 27.901253241466083 30.607228375301194 21.296526231982867 28 18.87959279811329 26.645415592448945 32.125694384870194 22.349297224567565 29 19.31368210981628 25.73690206896967 31.55543715958022 23.393978661633835 30 21.61318529822993 26.8704181133802 30.29207434263896 21.224322245750916 31 21.35089557023465 28.099353287068602 29.61638951473202 20.93336162796473 32 21.319703749189163 28.652904639567033 28.598798682192594 21.428592929051213 33 21.948393903409954 27.391836998842628 27.95938516367993 22.70038393406749 34 19.91524403367061 26.930807585971284 29.92593729729079 23.22801108306732 35 21.175258150885636 27.696493422250718 28.54510660905398 22.583141817809665 36 22.354715345472933 28.530056273205734 27.688817750968113 21.426410630353214 37 20.825450719932814 28.350581018215422 30.95094042023548 19.873027841616285 38 21.435591335220646 27.810311587103065 29.252020883846026 21.502076193830266 39 20.882228111920316 27.076570088661526 29.066036358601345 22.97516544081681 40 21.083940238126413 25.835782775492632 30.334591541410244 22.745685444970704 41 20.607333727652133 27.54501179193814 28.84174872862288 23.00590575178685 42 21.133907353142586 29.02344390815081 28.364427327195806 21.4782214115108 43 20.894381258117775 27.462234944772796 29.718506043462362 21.924877753647074 44 20.630812251575396 26.358480939502165 28.391555557562263 24.619151251360176 45 21.32820718894342 25.548358986630788 27.440374331953215 25.683059492472577 46 22.349184347048702 25.734042505158506 28.392571455232023 23.52420169256077 47 19.947639881583957 26.652451624458003 30.840696710147085 22.559211783810955 48 20.47560566314037 25.9321049249214 30.439304253074408 23.15298515886382 49 21.382877533912172 24.368676037005766 30.989845538403188 23.258600890678878 50 20.741808478456196 23.821370573884355 30.47162484930851 24.965196098350933 51 19.52536508352184 23.70905744261683 28.980512825143695 27.785064648717633 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 558.0 1 823.5 2 1089.0 3 14798.0 4 28507.0 5 19411.5 6 10316.0 7 10950.5 8 11585.0 9 12726.0 10 13867.0 11 15245.0 12 16623.0 13 17099.5 14 17576.0 15 17097.0 16 16618.0 17 15894.5 18 15171.0 19 14387.0 20 13603.0 21 13081.0 22 12559.0 23 13680.5 24 14802.0 25 15856.5 26 20467.5 27 24024.0 28 27749.5 29 31475.0 30 36687.0 31 41899.0 32 48240.0 33 54581.0 34 64366.5 35 74152.0 36 80697.5 37 87243.0 38 99974.5 39 112706.0 40 127466.0 41 142226.0 42 157326.0 43 172426.0 44 196398.5 45 220371.0 46 264635.5 47 308900.0 48 324647.0 49 340394.0 50 317674.0 51 294954.0 52 240380.0 53 185806.0 54 156185.5 55 126565.0 56 106298.5 57 86032.0 58 74227.0 59 62422.0 60 50387.0 61 38352.0 62 32488.0 63 26624.0 64 22077.0 65 17530.0 66 13240.0 67 8950.0 68 6623.0 69 4296.0 70 3560.5 71 2825.0 72 2075.5 73 1326.0 74 1083.0 75 614.0 76 388.0 77 335.0 78 282.0 79 208.0 80 134.0 81 176.0 82 218.0 83 118.5 84 19.0 85 11.0 86 3.0 87 1.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2657748.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.0052630616682 #Duplication Level Percentage of deduplicated Percentage of total 1 69.92268770147217 22.378940138644886 2 12.761123098859766 8.168462034826748 3 5.312717721006777 5.1010478469962495 4 2.806245944342685 3.5925855865770857 5 1.6621351402081437 2.6598536203202197 6 1.0817831502655457 2.077365257995736 7 0.7363297897273537 1.6496500034256754 8 0.5854491128795256 1.49899622935436 9 0.4385565571710182 1.263250618171017 >10 4.0665434130139975 28.153533759437032 >50 0.5073340221416567 10.815780795213005 >100 0.10953468536090928 6.374085242157148 >500 0.0054626648860882305 1.2348050485535702 >1k 0.0028554839177279377 1.675267590811786 >5k 0.0011173632721544102 2.7050400080570665 >10k+ 1.241514746838234E-4 0.6513362194584283 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16392 0.6167627630610577 No Hit CCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC 9875 0.37155516625353496 No Hit CTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGCT 9026 0.3396108284156361 Illumina Single End Adapter 1 (95% over 21bp) CGTTTCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTT 8665 0.3260279003125955 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTC 8326 0.3132727406812083 No Hit TCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC 7564 0.2846018508903026 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCT 7380 0.27767869640011017 No Hit CGCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTG 6539 0.24603536527917622 No Hit GCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTGC 5524 0.2078451380642559 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCC 5178 0.19482659755552445 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTC 4205 0.15821665560466983 No Hit CGTCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCT 4054 0.15253515382195754 No Hit TCCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCTG 3377 0.12706246039880378 No Hit TTCCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGTCTTCT 2805 0.10554048013581424 No Hit CGTTTTTTCTGTCTCTTATACACATCTGACGCAGTGCTGATCGTATGCCGT 2678 0.10076199850399663 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.525167924122227E-5 0.0 0.0 0.3505599477452339 0.0 2 7.525167924122227E-5 0.0 0.0 1.2694205771201785 0.0 3 7.525167924122227E-5 0.0 0.0 1.9904445417699497 0.0 4 1.128775188618334E-4 0.0 0.0 2.8204705638006313 0.0 5 1.128775188618334E-4 0.0 0.0 4.446207842127997 0.0 6 1.128775188618334E-4 0.0 0.0 6.101443778717922 0.0 7 1.128775188618334E-4 0.0 0.0 7.424631680655954 0.0 8 1.128775188618334E-4 0.0 0.0 9.10274412773521 0.0 9 1.128775188618334E-4 0.0 0.0 9.937887263954295 0.0 10 1.128775188618334E-4 0.0 0.0 11.250013169043868 0.0 11 1.128775188618334E-4 0.0 0.0 13.671950839582985 0.0 12 1.128775188618334E-4 0.0 0.0 15.602231663799577 0.0 13 1.5050335848244454E-4 0.0 0.0 16.319982180402356 0.0 14 1.5050335848244454E-4 0.0 0.0 16.585883989001214 0.0 15 1.5050335848244454E-4 0.0 0.0 16.87496331480637 0.0 16 1.5050335848244454E-4 0.0 0.0 17.550083755118994 0.0 17 1.5050335848244454E-4 0.0 0.0 18.64559770151271 0.0 18 1.5050335848244454E-4 0.0 0.0 19.82520539945849 0.0 19 1.5050335848244454E-4 0.0 0.0 20.67626426583709 0.0 20 1.5050335848244454E-4 0.0 0.0 21.464638483407757 0.0 21 1.5050335848244454E-4 0.0 0.0 22.63164152508063 0.0 22 1.5050335848244454E-4 0.0 0.0 23.90275526498374 0.0 23 1.5050335848244454E-4 0.0 0.0 25.250174207637443 0.0 24 1.5050335848244454E-4 0.0 0.0 26.2165186466136 0.0 25 1.5050335848244454E-4 0.0 0.0 27.055913502709814 0.0 26 1.5050335848244454E-4 0.0 0.0 27.81298302171613 0.0 27 1.5050335848244454E-4 0.0 0.0 28.552067389383794 0.0 28 1.5050335848244454E-4 0.0 0.0 29.338146430737602 0.0 29 1.5050335848244454E-4 0.0 0.0 30.177052150918747 0.0 30 1.5050335848244454E-4 0.0 0.0 31.057873056437256 0.0 31 1.5050335848244454E-4 0.0 0.0 31.8783421152043 0.0 32 1.5050335848244454E-4 0.0 0.0 32.66047044339795 0.0 33 1.8812919810305568E-4 0.0 0.0 33.44421668269528 0.0 34 2.257550377236668E-4 0.0 0.0 34.220738760785444 0.0 35 2.257550377236668E-4 0.0 0.0 35.04959838178789 0.0 36 2.257550377236668E-4 0.0 0.0 35.81757939428418 0.0 37 2.257550377236668E-4 0.0 0.0 36.59312320054422 0.0 38 2.257550377236668E-4 0.0 0.0 37.37051067294567 0.0 39 2.257550377236668E-4 0.0 0.0 38.170774655836446 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCACG 30 2.166582E-6 45.000004 1 TCGCTAG 20 7.034959E-4 45.0 1 AACGCGC 25 3.8921928E-5 45.0 42 TAAGCGT 20 7.034959E-4 45.0 10 CGTTTTT 11785 0.0 43.85448 1 CGTTATT 1835 0.0 43.405994 1 CCTACGG 140 0.0 43.392857 2 CTTACGG 495 0.0 41.81818 2 CGTATGG 375 0.0 41.399998 2 CTACGGG 780 0.0 41.250004 3 TTCGCGC 55 6.184564E-11 40.909092 1 TTATGGG 5850 0.0 40.884617 3 TTTACGG 925 0.0 40.62162 2 CCGGCTA 50 1.0822987E-9 40.5 19 TAGTTCG 50 1.0822987E-9 40.5 1 CTTCGCG 195 0.0 40.384617 1 TATGGGA 3770 0.0 40.344826 4 TATGGGT 1355 0.0 40.1845 4 TCACGGG 750 0.0 39.899998 3 TTGTACG 220 0.0 39.886364 1 >>END_MODULE