##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935299.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 615315 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.21884725709596 33.0 31.0 34.0 30.0 34.0 2 32.373800411171516 34.0 31.0 34.0 30.0 34.0 3 32.429597848256584 34.0 31.0 34.0 30.0 34.0 4 35.932423230377935 37.0 35.0 37.0 35.0 37.0 5 31.56783273607827 37.0 35.0 37.0 0.0 37.0 6 33.38627207202815 37.0 35.0 37.0 17.0 37.0 7 35.22395033438158 37.0 35.0 37.0 32.0 37.0 8 35.782291996782135 37.0 35.0 37.0 35.0 37.0 9 37.84741636397617 39.0 38.0 39.0 35.0 39.0 10 37.48618024914068 39.0 37.0 39.0 35.0 39.0 11 37.37092546094277 39.0 37.0 39.0 35.0 39.0 12 37.032828713748245 39.0 35.0 39.0 34.0 39.0 13 36.82988388061399 39.0 35.0 39.0 33.0 39.0 14 37.91498663286284 40.0 36.0 41.0 33.0 41.0 15 38.06083875738443 40.0 36.0 41.0 33.0 41.0 16 38.193835677661035 40.0 36.0 41.0 34.0 41.0 17 38.187291062301426 40.0 36.0 41.0 34.0 41.0 18 38.2103410448307 40.0 36.0 41.0 34.0 41.0 19 38.241864735948255 40.0 36.0 41.0 34.0 41.0 20 38.163610508438765 40.0 36.0 41.0 34.0 41.0 21 38.063135142162956 40.0 36.0 41.0 34.0 41.0 22 38.03323826007817 40.0 36.0 41.0 34.0 41.0 23 37.986129055849446 40.0 36.0 41.0 34.0 41.0 24 37.98013375263076 40.0 36.0 41.0 34.0 41.0 25 37.870385087313004 39.0 36.0 41.0 34.0 41.0 26 37.82515134524593 39.0 36.0 41.0 34.0 41.0 27 37.754316082006774 39.0 35.0 41.0 34.0 41.0 28 37.71125683592957 39.0 36.0 41.0 33.0 41.0 29 37.65945897629669 39.0 36.0 41.0 33.0 41.0 30 37.62854472912248 39.0 36.0 41.0 33.0 41.0 31 37.373436369989356 39.0 35.0 41.0 33.0 41.0 32 37.35268277223861 39.0 35.0 41.0 33.0 41.0 33 37.36770922210575 39.0 35.0 41.0 33.0 41.0 34 37.269749640428074 39.0 35.0 41.0 33.0 41.0 35 37.226778154278705 39.0 35.0 41.0 33.0 41.0 36 37.221571065226755 39.0 35.0 41.0 33.0 41.0 37 37.107073612702436 39.0 35.0 41.0 32.0 41.0 38 37.08690670632115 39.0 35.0 41.0 32.0 41.0 39 37.136586951398876 39.0 35.0 41.0 32.0 41.0 40 37.082312311580246 39.0 35.0 41.0 32.0 41.0 41 37.11062138904464 39.0 35.0 41.0 32.0 41.0 42 37.08677506642939 39.0 35.0 41.0 32.0 41.0 43 36.942744773002445 39.0 35.0 41.0 32.0 41.0 44 36.8172708287625 39.0 35.0 40.0 32.0 41.0 45 36.88313302942395 39.0 35.0 40.0 32.0 41.0 46 36.86414763170084 39.0 35.0 40.0 32.0 41.0 47 36.8513103044782 39.0 35.0 40.0 32.0 41.0 48 36.80289120206724 39.0 35.0 40.0 32.0 41.0 49 36.776480339338384 39.0 35.0 40.0 32.0 41.0 50 36.63127991354022 38.0 35.0 40.0 31.0 41.0 51 35.95978645084225 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 5.0 10 5.0 11 1.0 12 4.0 13 7.0 14 10.0 15 8.0 16 18.0 17 21.0 18 65.0 19 101.0 20 198.0 21 294.0 22 548.0 23 806.0 24 1302.0 25 1882.0 26 2720.0 27 3619.0 28 4756.0 29 6253.0 30 8582.0 31 11574.0 32 16031.0 33 25416.0 34 42428.0 35 66035.0 36 52679.0 37 82478.0 38 131753.0 39 155589.0 40 126.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.966935634593664 4.5298749421028255 57.42895915100396 15.074230272299555 2 18.302007914645344 4.291948026620512 55.66595971169238 21.740084347041762 3 19.4729528777943 4.306574681260818 55.267302113551594 20.953170327393288 4 18.688639152304106 4.263669827649253 53.08711798022151 23.96057303982513 5 14.808675231385552 16.459049429966765 46.7966813745805 21.935593964067184 6 19.51276988209291 5.984739523658614 55.490114819238926 19.01237577500955 7 81.72285739824318 1.61315748844088 10.87930572145974 5.784679391856204 8 83.65243818206935 1.8587227680131313 7.774066941322737 6.714772108594786 9 79.03951634528656 4.276671298440636 10.463746211290152 6.220066144982652 10 38.15801662563077 26.458318097234752 18.49166686981465 16.89199840731983 11 29.17692563971299 27.725798981009724 24.410423929206992 18.68685145007029 12 26.733786759627183 22.25022955721866 31.48842462803605 19.52755905511811 13 21.587804620397684 29.719086971713676 31.000056881434713 17.693051526453928 14 16.703314562459877 32.998057905300534 29.402013602788816 20.89661392945077 15 14.248474358661822 26.367307801695066 38.50450582222114 20.87971201742197 16 16.73955616229086 24.405710896045115 34.864744074173394 23.989988867490634 17 16.35666284748462 24.85166134418956 28.967926996741504 29.82374881158431 18 18.625582018965893 23.751086841698967 33.90149760691678 23.721833532418355 19 20.776350324630474 25.16174642256405 31.412528542291344 22.649374710514127 20 23.81869448981416 26.349430779356915 29.205528875454036 20.62634585537489 21 22.056345124042156 27.377359563800656 29.999756222422665 20.566539089734526 22 20.16804400997863 25.492471335819864 28.840675101370845 25.498809552830664 23 19.11021184271471 27.388735850743117 26.976589226656266 26.524463079885912 24 21.236927427415225 23.787003404760164 31.00054443658939 23.97552473123522 25 17.784386858763398 26.525275671810373 28.947937235399756 26.742400234026476 26 18.80613994458123 29.61296246637901 27.77114161039468 23.809755978645082 27 19.622794828664993 29.261597718241877 27.932197329822937 23.183410123270196 28 16.62806855025475 28.004843047869795 32.07690369973103 23.29018470214443 29 16.736955868132583 28.128357020387934 30.222893964879777 24.91179314659971 30 19.84235716665448 30.081340451638596 26.903130916684947 23.17317146502198 31 24.481444463404923 31.403915067892058 22.841308923071924 21.2733315456311 32 22.77305120141716 33.28214004209226 22.83318300382731 21.111625752663272 33 23.706069249083804 29.66838123562728 23.395009060399957 23.23054045488896 34 20.267667779917602 29.456619780112625 26.2337176893136 24.04199475065617 35 20.888488010206157 28.10690459358215 24.72115908112105 26.283448315090645 36 25.464030618463713 26.84592444520286 25.21992800435549 22.47011693197793 37 20.55532532117696 30.626264596182445 27.038996286454903 21.779413796185693 38 17.82371630790733 35.19839431835726 24.27910907421402 22.698780299521385 39 21.724320063707207 29.973590762455004 27.721573503002528 20.580515670835265 40 24.75788823610671 26.79749396650496 26.768728212379024 21.675889585009305 41 21.943232328157123 26.471482086411026 24.696456286617423 26.888829298814425 42 24.679554374588626 25.214402379269156 24.361505895354412 25.74453735078781 43 24.555552846915806 24.38328335892998 25.3379163517873 25.72324744236692 44 20.114412942964172 27.128218879760773 26.226729398763236 26.53063877851182 45 21.057344612109244 27.634138611930474 24.28772254861331 27.02079422734697 46 23.710619763860787 27.47698333373963 26.56606778641834 22.246329115981244 47 19.993824301374094 28.06318714804612 28.699771661669228 23.24321688891056 48 20.569139383892804 26.5774440733608 28.48508487522651 24.36833166751989 49 22.669201953470985 23.5923063796592 30.082478080332837 23.65601358653698 50 22.77305120141716 24.28203440514208 27.222642061383194 25.722272332057567 51 20.53679822529924 25.264945596970655 23.871350446519262 30.326905731210847 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 77.0 1 185.0 2 293.0 3 489.0 4 685.0 5 533.5 6 382.0 7 446.0 8 510.0 9 677.0 10 844.0 11 1063.0 12 1282.0 13 1266.0 14 1250.0 15 1271.5 16 1293.0 17 1212.5 18 1132.0 19 996.0 20 860.0 21 1102.5 22 1345.0 23 1697.0 24 2049.0 25 2866.5 26 4084.5 27 4485.0 28 5655.0 29 6825.0 30 7584.5 31 8344.0 32 9514.5 33 10685.0 34 12009.5 35 13334.0 36 15395.0 37 17456.0 38 20175.5 39 22895.0 40 28743.5 41 34592.0 42 40289.5 43 45987.0 44 52243.5 45 58500.0 46 67595.5 47 76691.0 48 83741.0 49 90791.0 50 84423.0 51 78055.0 52 61868.5 53 45682.0 54 36469.0 55 27256.0 56 23034.0 57 18812.0 58 15708.0 59 12604.0 60 10905.5 61 9207.0 62 7958.0 63 6709.0 64 5684.5 65 4660.0 66 3633.0 67 2606.0 68 2058.5 69 1511.0 70 1106.5 71 702.0 72 509.5 73 317.0 74 355.5 75 263.0 76 132.0 77 143.5 78 155.0 79 166.5 80 178.0 81 101.0 82 24.0 83 32.0 84 40.0 85 20.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 615315.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.729057499858794 #Duplication Level Percentage of deduplicated Percentage of total 1 63.93343118764643 17.088803583778667 2 13.534632977355127 7.235359661824203 3 6.342254256517288 5.085674361035243 4 3.657883076123157 3.9108706827782487 5 2.4374429192549103 3.2575275970694086 6 1.6417707375753359 2.6329790667742046 7 1.2166926863312741 2.27647341408244 8 0.8865723607364078 1.89577948863272 9 0.6695394468520169 1.6106542535998092 >10 4.544624862730157 25.463576565949314 >50 0.9598560991268237 17.322584104137157 >100 0.1624277562379362 7.499725088761291 >500 0.00980695886719615 1.7320290459921874 >1k 0.003064674645998797 2.9879630855850845 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 4776 0.7761878062455816 No Hit CTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGCT 4364 0.7092302316699576 No Hit TCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 4323 0.7025669778893737 No Hit GCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 3204 0.5207089051949001 No Hit TCCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTG 1571 0.2553163826657891 No Hit TTCCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCT 948 0.15406742887789182 No Hit TGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTG 834 0.13554033300017065 No Hit GCCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTG 810 0.13163989176275567 No Hit TGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGCTT 737 0.11977604966561843 Illumina Single End Adapter 2 (95% over 21bp) TTTCCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTC 704 0.11441294296417283 No Hit TTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTG 666 0.10823724433826577 No Hit CGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTG 666 0.10823724433826577 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCC 664 0.10791220756848117 No Hit TTTTTTGGGAGTTACATCATCGGAGAGCGGTTTTTGAGCTTTCAATAAGCT 637 0.10352421117638932 No Hit TTTTTCGGGATTTGGGGAAAGGGAAAATTGGCTTTCTGTTTAATTGGCAAA 623 0.10124895378789726 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.250367697845819E-4 0.0 0.0 0.7656241112275827 0.0 2 3.250367697845819E-4 0.0 0.0 2.983837546622462 0.0 3 3.250367697845819E-4 0.0 0.0 4.10310166337567 0.0 4 3.250367697845819E-4 0.0 0.0 5.270958777211672 0.0 5 3.250367697845819E-4 0.0 0.0 7.165273071516215 0.0 6 3.250367697845819E-4 0.0 0.0 8.383998439823506 0.0 7 3.250367697845819E-4 0.0 0.0 9.47043384282847 0.0 8 3.250367697845819E-4 0.0 0.0 11.320055581287633 0.0 9 3.250367697845819E-4 0.0 0.0 12.042449802133866 0.0 10 3.250367697845819E-4 0.0 0.0 13.710375986283449 0.0 11 3.250367697845819E-4 0.0 0.0 16.68982553651382 0.0 12 3.250367697845819E-4 0.0 0.0 19.268179712830015 0.0 13 3.250367697845819E-4 0.0 0.0 20.089547630075653 0.0 14 3.250367697845819E-4 0.0 0.0 20.328124619097537 0.0 15 3.250367697845819E-4 0.0 0.0 20.71719363252968 0.0 16 3.250367697845819E-4 0.0 0.0 21.812242509933935 0.0 17 3.250367697845819E-4 0.0 0.0 23.40573527380285 0.0 18 3.250367697845819E-4 0.0 0.0 25.42242591193129 0.0 19 3.250367697845819E-4 0.0 0.0 26.55404142593631 0.0 20 3.250367697845819E-4 0.0 0.0 27.717022988225544 0.0 21 3.250367697845819E-4 0.0 0.0 29.425416250213306 0.0 22 3.250367697845819E-4 0.0 0.0 30.99079333349585 0.0 23 3.250367697845819E-4 0.0 0.0 32.54365650114169 0.0 24 3.250367697845819E-4 0.0 0.0 33.676084607071175 0.0 25 3.250367697845819E-4 0.0 0.0 34.615928426903295 0.0 26 4.875551546768728E-4 0.0 0.0 35.51823049982529 0.0 27 4.875551546768728E-4 0.0 0.0 36.33797323322201 0.0 28 4.875551546768728E-4 0.0 0.0 37.168604698406504 0.0 29 4.875551546768728E-4 0.0 0.0 38.13965204813795 0.0 30 4.875551546768728E-4 0.0 0.0 39.25387809495949 0.0 31 4.875551546768728E-4 0.0 0.0 40.254178753971544 0.0 32 4.875551546768728E-4 0.0 0.0 41.102687241494195 0.0 33 4.875551546768728E-4 0.0 0.0 41.866198613718176 0.0 34 4.875551546768728E-4 0.0 0.0 42.676352762406246 0.0 35 4.875551546768728E-4 0.0 0.0 43.546801231889354 0.0 36 4.875551546768728E-4 0.0 0.0 44.36459374466737 0.0 37 4.875551546768728E-4 0.0 0.0 45.16125886740937 0.0 38 4.875551546768728E-4 0.0 0.0 45.94784785028806 0.0 39 4.875551546768728E-4 0.0 0.0 46.74370038110561 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTAAT 35 1.2107012E-7 45.000004 15 TCGGCGT 65 0.0 45.000004 4 CTTTGAC 70 0.0 45.000004 35 GCGTCCC 70 0.0 45.000004 7 TCGCGGT 35 1.2107012E-7 45.000004 13 GTCGGCG 65 0.0 45.000004 3 AGTCGCG 35 1.2107012E-7 45.000004 11 AAACTCC 20 7.0307293E-4 45.0 31 AATCCGA 25 3.888686E-5 45.0 44 GTACCGC 25 3.888686E-5 45.0 26 AGATCGA 50 2.1827873E-11 45.0 32 TGCCCCG 20 7.0307293E-4 45.0 1 ACTGCGG 25 3.888686E-5 45.0 2 TCCGCTA 20 7.0307293E-4 45.0 41 TCCGCGT 25 3.888686E-5 45.0 38 GCGACAG 20 7.0307293E-4 45.0 38 TCCGCAC 25 3.888686E-5 45.0 17 ATAGGTG 20 7.0307293E-4 45.0 36 GTCGAGG 20 7.0307293E-4 45.0 1 GTTTCGC 25 3.888686E-5 45.0 37 >>END_MODULE