##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935298.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1146429 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.23785336902678 33.0 31.0 34.0 30.0 34.0 2 32.38432820523556 34.0 31.0 34.0 30.0 34.0 3 32.43586301463065 34.0 31.0 34.0 30.0 34.0 4 35.92503068223152 37.0 35.0 37.0 35.0 37.0 5 31.677881491134645 37.0 35.0 37.0 0.0 37.0 6 33.417700529208524 37.0 35.0 37.0 17.0 37.0 7 35.21338259935853 37.0 35.0 37.0 32.0 37.0 8 35.754767194479555 37.0 35.0 37.0 35.0 37.0 9 37.794824624987676 39.0 38.0 39.0 35.0 39.0 10 37.46882100854043 39.0 37.0 39.0 35.0 39.0 11 37.36595637409731 39.0 37.0 39.0 35.0 39.0 12 37.112348867657744 39.0 37.0 39.0 34.0 39.0 13 36.983999881370764 39.0 37.0 39.0 33.0 39.0 14 38.11047347895072 40.0 37.0 41.0 33.0 41.0 15 38.21864502729781 40.0 37.0 41.0 34.0 41.0 16 38.322579941714665 40.0 37.0 41.0 34.0 41.0 17 38.326190283044134 40.0 37.0 41.0 34.0 41.0 18 38.31464224997797 40.0 37.0 41.0 34.0 41.0 19 38.339338938564886 40.0 37.0 41.0 34.0 41.0 20 38.267100710118115 40.0 37.0 41.0 34.0 41.0 21 38.19988852340616 40.0 37.0 41.0 34.0 41.0 22 38.17454722446833 40.0 37.0 41.0 34.0 41.0 23 38.140281692106534 40.0 37.0 41.0 34.0 41.0 24 38.09293554158173 40.0 37.0 41.0 34.0 41.0 25 38.02611151671844 40.0 36.0 41.0 34.0 41.0 26 38.00273196159553 40.0 36.0 41.0 34.0 41.0 27 37.93994481995832 40.0 36.0 41.0 34.0 41.0 28 37.92264763016288 40.0 36.0 41.0 34.0 41.0 29 37.887971256833175 40.0 36.0 41.0 34.0 41.0 30 37.7938633792411 40.0 36.0 41.0 33.0 41.0 31 37.59666494828725 40.0 36.0 41.0 33.0 41.0 32 37.5948488741998 39.0 36.0 41.0 33.0 41.0 33 37.58548763159341 39.0 36.0 41.0 33.0 41.0 34 37.58044414438225 39.0 36.0 41.0 33.0 41.0 35 37.502958316651096 39.0 35.0 41.0 33.0 41.0 36 37.486600565756795 39.0 35.0 41.0 33.0 41.0 37 37.47528194070457 39.0 35.0 41.0 33.0 41.0 38 37.46550462348737 39.0 35.0 41.0 33.0 41.0 39 37.42239685144043 39.0 35.0 41.0 33.0 41.0 40 37.34605283013602 39.0 35.0 41.0 33.0 41.0 41 37.291010607721894 39.0 35.0 41.0 33.0 41.0 42 37.300955401512 39.0 35.0 41.0 33.0 41.0 43 37.2936911051622 39.0 35.0 41.0 33.0 41.0 44 37.26594233048885 39.0 35.0 41.0 33.0 41.0 45 37.25905049505901 39.0 35.0 41.0 33.0 41.0 46 37.11864930143951 39.0 35.0 41.0 32.0 41.0 47 37.059481223869945 39.0 35.0 41.0 32.0 41.0 48 37.051806958826056 39.0 35.0 41.0 32.0 41.0 49 37.05042789392104 39.0 35.0 41.0 32.0 41.0 50 36.99526180862487 39.0 35.0 41.0 32.0 41.0 51 36.3084831245546 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 2.0 11 3.0 12 12.0 13 10.0 14 10.0 15 23.0 16 33.0 17 60.0 18 128.0 19 189.0 20 358.0 21 623.0 22 1023.0 23 1590.0 24 2324.0 25 3388.0 26 4852.0 27 6325.0 28 8269.0 29 10765.0 30 14825.0 31 20340.0 32 28171.0 33 43398.0 34 73747.0 35 101416.0 36 96112.0 37 151561.0 38 248065.0 39 328533.0 40 271.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.885797550480667 4.502764671863674 54.43224133374156 16.1791964439141 2 20.16287096715104 5.063549508953455 53.01593033672386 21.757649187171644 3 20.53105774539897 4.8917987943431305 52.0751830248537 22.501960435404197 4 18.970123749486447 4.662041870887774 51.412342151149346 24.955492228476427 5 16.000816448292916 17.202286404129694 45.53199543975248 21.264901707824908 6 21.14199832697882 6.676994388662534 53.288428677222925 18.892578607135725 7 80.9921940216097 2.5552389201599053 10.757404078229005 5.695162980001378 8 81.19761450556467 3.20621686995008 8.744283335470405 6.851885289014844 9 76.29011478251161 5.048023035006965 11.507297878891759 7.154564303589668 10 37.98011041241978 24.380663782929428 21.20227244774862 16.436953356902173 11 29.54975842376632 25.32786592104701 24.664240000907164 20.458135654279506 12 25.998382804342878 20.77450936778466 32.34434927937099 20.882758548501474 13 22.498820249662213 26.15443259024327 32.12418736790503 19.222559792189486 14 19.256927380587896 28.705397368698804 30.44820045550139 21.589474795211917 15 17.038473381256054 25.820700627775466 36.7219426584638 20.418883332504674 16 18.229999415576543 23.764140648919383 33.779850300367485 24.226009635136585 17 17.887108578027945 24.888239917168878 29.388387767580898 27.83626373722228 18 19.17981837514578 23.2983464305247 33.670467163688286 23.851368030641236 19 21.856041673753893 26.15172854140989 29.532400174803676 22.459829610032543 20 24.077199721919108 26.070258166881683 30.13392019915756 19.71862191204165 21 21.922160029099054 27.73342265417222 29.10960905559786 21.23480826113087 22 20.216864716436866 25.50136118329177 27.997808848171147 26.283965252100217 23 19.926484762684822 26.481709726463652 27.29493060625647 26.296874904595054 24 21.252602647002124 24.199230828947975 30.18965849607782 24.358508027972075 25 18.01498391963218 26.733011813204303 28.059391379666778 27.192612887496743 26 17.442248931246507 26.850681551147083 30.73116608180707 24.97590343579934 27 19.271232671190276 26.037024534445656 29.602356534944597 25.089386259419467 28 16.485539008521243 24.13014674262427 32.79357029523852 26.59074395361597 29 19.754908502837942 23.088128440575037 30.977234525644416 26.179728530942604 30 20.594210369765594 26.029522979617575 28.30764050804716 25.068626142569666 31 23.33838379873503 27.24207081293303 24.721373935934977 24.698171452396963 32 21.639543312320257 29.42345317503308 25.151928292114036 23.78507522053263 33 21.314446860642917 29.013397253558658 24.150994086855793 25.521161798942632 34 19.907033056560852 26.035279986811222 27.998419439843197 26.05926751678473 35 19.02019226659479 25.996376574563275 28.248849252766632 26.7345819060753 36 20.33148149601938 27.437809057516866 27.27556612751422 24.95514331894954 37 19.828353958247742 26.499591339716634 28.249983208729017 25.422071493306607 38 20.516490772651423 29.17415731807203 24.72617144192968 25.583180467346867 39 22.93879516306723 27.558008389529576 27.519977251098847 21.98321919630435 40 23.206583224953313 26.289983941439026 27.855366533819364 22.6480662997883 41 18.777264008499436 27.295715652691964 26.667416822149477 27.25960351665912 42 19.545301104560334 26.63645110163822 27.070407325704426 26.747840468097024 43 21.189362795253782 24.435180896505585 27.451067619538584 26.92438868870205 44 20.210584344952892 23.52034011700681 27.7393541161293 28.529721421911 45 22.14476430725322 23.329224923654234 26.143005803237706 28.38300496585484 46 22.534496248786446 24.856838059749013 28.21858135130915 24.390084340155386 47 18.43864731265521 25.264626069298668 30.963888736240968 25.332837881805155 48 19.121550484155584 24.443729179914325 29.46619459207679 26.968525743853306 49 20.86976166862492 22.5255118284691 31.29779515347222 25.306931349433764 50 21.46910100843576 22.23242782588368 28.71883038548397 27.57964078019659 51 19.338659437261267 22.9007640246365 25.830295639764874 31.930280898337358 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 343.0 1 689.5 2 1036.0 3 1489.5 4 1943.0 5 1482.0 6 1021.0 7 1089.0 8 1157.0 9 1359.0 10 1561.0 11 1681.0 12 1801.0 13 1864.0 14 1927.0 15 1994.5 16 2062.0 17 1904.0 18 1746.0 19 2195.5 20 2645.0 21 2833.5 22 3022.0 23 3620.5 24 4219.0 25 5073.5 26 8039.5 27 10151.0 28 11483.0 29 12815.0 30 14081.0 31 15347.0 32 16819.5 33 18292.0 34 20875.5 35 23459.0 36 26692.0 37 29925.0 38 33557.5 39 37190.0 40 44627.0 41 52064.0 42 63171.0 43 74278.0 44 84907.0 45 95536.0 46 113613.5 47 131691.0 48 147247.5 49 162804.0 50 153278.5 51 143753.0 52 118445.0 53 93137.0 54 77040.5 55 60944.0 56 51912.0 57 42880.0 58 37915.5 59 32951.0 60 29700.5 61 26450.0 62 22387.5 63 18325.0 64 15177.5 65 12030.0 66 10090.5 67 8151.0 68 6654.0 69 5157.0 70 4377.5 71 3598.0 72 2968.0 73 2338.0 74 1882.0 75 1060.5 76 695.0 77 538.0 78 381.0 79 289.5 80 198.0 81 120.0 82 42.0 83 24.5 84 7.0 85 4.5 86 2.0 87 1.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1146429.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.152330822788038 #Duplication Level Percentage of deduplicated Percentage of total 1 63.24965077900573 16.541257915983714 2 13.45454319180264 7.0373532924302635 3 6.374699281812347 5.001397335412375 4 3.837287139066613 4.014160108915997 5 2.461741508169156 3.219013916091447 6 1.6633902470560502 2.6100919217045373 7 1.2591142850095942 2.3050141327688394 8 0.9724688325211317 2.0345861298354473 9 0.7798055533883715 1.8354359528693995 >10 4.874988771852352 27.086936001982536 >50 0.9123639720244872 16.12722815422714 >100 0.1456179031951777 6.532582492973943 >500 0.008996987153523933 1.677807565616475 >1k 0.0039986609571217475 1.4900095443261046 >5k 0.0013328869857072493 2.487125534861798 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 8417 0.7341928719528205 No Hit CTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGCT 7564 0.6597879153440814 No Hit TCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 6404 0.5586041525467342 No Hit GCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 6155 0.5368845344979933 No Hit TCCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTG 2550 0.2224298233907202 No Hit GCCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTG 1742 0.15195009895946457 No Hit TTCCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCT 1654 0.14427408936794167 No Hit TGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTG 1573 0.13720867144847174 No Hit TGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGCTT 1522 0.13276007498065734 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCC 1361 0.11871646652343931 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC 1193 0.10406226639416832 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG 1149 0.10022426159840689 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6793268488497761 0.0 2 0.0 0.0 0.0 2.6354881113440083 0.0 3 0.0 0.0 0.0 3.6714004966727116 0.0 4 0.0 0.0 0.0 4.863973259573859 0.0 5 0.0 0.0 0.0 6.798676586164516 0.0 6 0.0 0.0 0.0 7.982788293038644 0.0 7 0.0 0.0 0.0 9.10086887194933 0.0 8 0.0 0.0 0.0 10.876120544752444 0.0 9 0.0 0.0 0.0 11.622001885855992 0.0 10 0.0 0.0 0.0 13.351371955873413 0.0 11 0.0 0.0 0.0 16.34309669416946 0.0 12 0.0 0.0 0.0 19.052291943068433 0.0 13 8.722738172185107E-5 0.0 0.0 19.85993027043105 0.0 14 8.722738172185107E-5 0.0 0.0 20.122135779886936 0.0 15 8.722738172185107E-5 0.0 0.0 20.57379916244268 0.0 16 8.722738172185107E-5 0.0 0.0 21.70374266526754 0.0 17 8.722738172185107E-5 0.0 0.0 23.32233396049821 0.0 18 8.722738172185107E-5 0.0 0.0 25.225809884432444 0.0 19 8.722738172185107E-5 0.0 0.0 26.394133435214915 0.0 20 8.722738172185107E-5 0.0 0.0 27.613746686449836 0.0 21 8.722738172185107E-5 0.0 0.0 29.192562295615343 0.0 22 8.722738172185107E-5 0.0 0.0 30.713982287607866 0.0 23 8.722738172185107E-5 0.0 0.0 32.252847755944764 0.0 24 8.722738172185107E-5 0.0 0.0 33.4270155413026 0.0 25 8.722738172185107E-5 0.0 0.0 34.44722699792137 0.0 26 8.722738172185107E-5 0.0 0.0 35.36991824177511 0.0 27 8.722738172185107E-5 0.0 0.0 36.21026683728343 0.0 28 8.722738172185107E-5 0.0 0.0 37.10766214043783 0.0 29 8.722738172185107E-5 0.0 0.0 38.07326925609872 0.0 30 8.722738172185107E-5 0.0 0.0 39.09967385681974 0.0 31 8.722738172185107E-5 0.0 0.0 40.078452307120635 0.0 32 8.722738172185107E-5 0.0 0.0 41.031324225050135 0.0 33 8.722738172185107E-5 0.0 0.0 41.877080918225204 0.0 34 8.722738172185107E-5 0.0 0.0 42.73897467701881 0.0 35 8.722738172185107E-5 0.0 0.0 43.65599614106063 0.0 36 8.722738172185107E-5 0.0 0.0 44.51719208080047 0.0 37 8.722738172185107E-5 0.0 0.0 45.39400172186851 0.0 38 8.722738172185107E-5 0.0 0.0 46.26993908911934 0.0 39 8.722738172185107E-5 0.0 0.0 47.08882974872408 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACAGTCG 20 7.0332806E-4 45.0 15 CGAACGA 25 3.8908E-5 45.0 22 CACGGTA 20 7.0332806E-4 45.0 44 GTACACG 20 7.0332806E-4 45.0 36 CGAAACA 25 3.8908E-5 45.0 44 TCCGATA 25 3.8908E-5 45.0 14 ACGTTAG 20 7.0332806E-4 45.0 13 GTTTACG 80 0.0 45.0 1 CGGCACG 20 7.0332806E-4 45.0 18 TAAACCG 20 7.0332806E-4 45.0 15 CAACCCG 20 7.0332806E-4 45.0 23 ACCTCGT 20 7.0332806E-4 45.0 23 CGCCTCA 20 7.0332806E-4 45.0 18 ATTCCCG 25 3.8908E-5 45.0 1 TCGTGTT 20 7.0332806E-4 45.0 12 ACGGCCC 20 7.0332806E-4 45.0 14 TACGACA 25 3.8908E-5 45.0 23 CGCTAAA 25 3.8908E-5 45.0 19 GTCACGA 25 3.8908E-5 45.0 16 TATTACG 20 7.0332806E-4 45.0 1 >>END_MODULE