SRR2935295.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2935295.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	801984
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC	4091	0.5101099273800974	No Hit
CTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGCT	3503	0.4367917564440188	No Hit
TCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC	2855	0.3559921394940547	No Hit
GCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTGC	2170	0.2705789641688612	No Hit
TCCTGTCTCTTATACACATCTGACGCAGAAGCAGTCGTATGCCGTCTTCTG	1125	0.14027711276035432	No Hit
CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG	1122	0.13990304045966004	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCACAAG	30	2.1646774E-6	45.000004	45
CGCATAC	30	2.1646774E-6	45.000004	23
TGCGATG	60	0.0	45.000004	1
TTAGTAG	30	2.1646774E-6	45.000004	44
ATCGGAT	30	2.1646774E-6	45.000004	11
AGCAACG	25	3.889747E-5	45.0	20
ACCGGTT	25	3.889747E-5	45.0	11
CGAACTG	25	3.889747E-5	45.0	27
TGCCCGG	40	6.8102963E-9	45.0	2
CTCGTTA	20	7.0320105E-4	45.0	20
CTACTTG	20	7.0320105E-4	45.0	1
CGTATGG	105	0.0	45.0	2
ATTACGA	25	3.889747E-5	45.0	19
TAAACCG	20	7.0320105E-4	45.0	26
TTCGTAC	20	7.0320105E-4	45.0	33
CGTCTAC	35	1.2113196E-7	45.0	24
CCTCGTC	55	1.8189894E-12	45.0	36
TCGATGT	35	1.2113196E-7	45.0	21
ACGGGTA	25	3.889747E-5	45.0	5
CGTTCCA	25	3.889747E-5	45.0	12