##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935294.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 718257 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.20150725993621 33.0 31.0 34.0 30.0 34.0 2 32.33992568119768 34.0 31.0 34.0 30.0 34.0 3 32.412156094545544 34.0 31.0 34.0 30.0 34.0 4 35.898203567803726 37.0 35.0 37.0 35.0 37.0 5 31.767389666929805 37.0 35.0 37.0 0.0 37.0 6 33.443653177066146 37.0 35.0 37.0 17.0 37.0 7 35.21493977782326 37.0 35.0 37.0 32.0 37.0 8 35.750405495525975 37.0 35.0 37.0 35.0 37.0 9 37.74252530779373 39.0 37.0 39.0 35.0 39.0 10 37.49131299799375 39.0 37.0 39.0 35.0 39.0 11 37.37629010228929 39.0 37.0 39.0 35.0 39.0 12 36.99825549907624 39.0 35.0 39.0 34.0 39.0 13 36.795174986112215 39.0 35.0 39.0 33.0 39.0 14 37.85777096498885 40.0 36.0 41.0 33.0 41.0 15 38.02323402347628 40.0 36.0 41.0 33.0 41.0 16 38.11666715395743 40.0 36.0 41.0 34.0 41.0 17 38.15131909608956 40.0 36.0 41.0 34.0 41.0 18 38.149223745818 40.0 36.0 41.0 34.0 41.0 19 38.18284820057445 40.0 36.0 41.0 34.0 41.0 20 38.09402205617209 40.0 36.0 41.0 34.0 41.0 21 38.03332651126268 40.0 36.0 41.0 34.0 41.0 22 37.99204184574602 40.0 36.0 41.0 34.0 41.0 23 37.965906353853846 40.0 36.0 41.0 34.0 41.0 24 37.940454461286144 40.0 36.0 41.0 34.0 41.0 25 37.85863416576518 39.0 35.0 41.0 34.0 41.0 26 37.804316560785345 39.0 35.0 41.0 34.0 41.0 27 37.73365940046529 39.0 35.0 41.0 34.0 41.0 28 37.72664241350937 39.0 36.0 41.0 33.0 41.0 29 37.68332226487177 39.0 36.0 41.0 33.0 41.0 30 37.581705434127336 39.0 36.0 41.0 33.0 41.0 31 37.31332935147169 39.0 35.0 41.0 33.0 41.0 32 37.28829792121761 39.0 35.0 41.0 33.0 41.0 33 37.25534175093316 39.0 35.0 41.0 32.0 41.0 34 37.252539132928746 39.0 35.0 41.0 32.0 41.0 35 37.1689228228893 39.0 35.0 41.0 32.0 41.0 36 37.134387830539765 39.0 35.0 41.0 32.0 41.0 37 37.06949323153133 39.0 35.0 41.0 32.0 41.0 38 37.014851230130716 39.0 35.0 41.0 32.0 41.0 39 36.894335871422065 39.0 35.0 40.0 32.0 41.0 40 36.690807050958085 39.0 35.0 40.0 31.0 41.0 41 36.60387298696706 38.0 35.0 40.0 31.0 41.0 42 36.54421606750787 38.0 35.0 40.0 31.0 41.0 43 36.35449845946506 37.0 35.0 40.0 31.0 41.0 44 36.242074911904794 37.0 35.0 40.0 31.0 41.0 45 36.106679085619774 37.0 35.0 40.0 31.0 41.0 46 35.88623013768052 37.0 34.0 40.0 31.0 41.0 47 35.713730600606745 36.0 34.0 40.0 30.0 41.0 48 35.65794416204785 36.0 34.0 40.0 31.0 41.0 49 35.590304027666974 36.0 34.0 40.0 31.0 41.0 50 35.40986861248829 35.0 34.0 40.0 31.0 41.0 51 34.784163607176815 35.0 34.0 39.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 6.0 11 7.0 12 6.0 13 8.0 14 9.0 15 26.0 16 44.0 17 38.0 18 82.0 19 162.0 20 277.0 21 459.0 22 729.0 23 1156.0 24 1709.0 25 2530.0 26 3468.0 27 4622.0 28 6047.0 29 7873.0 30 10847.0 31 14325.0 32 20173.0 33 31964.0 34 55207.0 35 82064.0 36 70039.0 37 110368.0 38 140581.0 39 153241.0 40 187.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.547680008687696 4.604758463892451 52.85197359719432 16.995587930225533 2 20.460642917507244 4.63678042817543 51.58348613379333 23.319090520523993 3 21.215386693063902 4.595848004265882 50.773608889297286 23.415156413372927 4 19.53687886090912 4.448546968564178 51.05679443430415 24.957779736222548 5 16.340251469877774 16.722008974503556 44.8534438230327 22.084295732585968 6 21.4118344826434 6.856598682644234 52.80268761738487 18.928879217327502 7 81.34107986417118 2.0782254819653687 10.69505761865182 5.885637035211631 8 81.23735654508066 2.779367273830955 8.593302954235044 7.389973226853341 9 74.59460889347407 5.902204921079781 12.127135551759329 7.376050633686828 10 40.465738586606186 25.982482593277894 18.22077612887866 15.331002691237257 11 32.319072421152875 24.262485433486898 25.2702027268791 18.14823941848113 12 29.74951862634127 20.10408530651285 30.18640959990644 19.959986467239442 13 24.05754486207583 26.932978028755723 30.44815435143688 18.561322757731563 14 17.82300764211139 30.836733926714256 29.733368418268114 21.606890012906245 15 16.468757004804687 25.56466557235084 38.68267207977089 19.283905343073577 16 16.91400153426977 22.37861935212605 37.8254580185087 22.88192109509549 17 16.989601215163933 23.15271553218416 29.882897068876463 29.974786183775443 18 19.25759164198887 23.34623957719869 33.81644731621133 23.57972146460111 19 22.939142953009856 24.77943131775952 30.15007163174184 22.13135409748878 20 25.71280196364254 25.679109288179582 28.707551753759446 19.900536994418434 21 22.73726535209542 27.809544494519372 28.324680441680343 21.12850971170486 22 19.953721300314513 25.131812150803963 28.278039754572525 26.636426794309 23 20.14724534532904 26.911954913074286 26.70617898607323 26.23462075552344 24 21.746115944571372 23.348745643968662 30.27078051449551 24.634357896964456 25 18.825016672305317 24.997459126747113 28.78732821260357 27.390195988344008 26 20.635649913610308 27.44505100542007 27.412472137410425 24.506826943559197 27 22.112140918918993 28.05931581592661 28.554960132654468 21.273583132499926 28 19.70520301229226 24.8386023387172 31.031371779182106 24.424822869808438 29 22.22380011611443 23.543522722368177 30.28762685222699 23.94505030929041 30 24.175608452127857 27.218808866464233 26.675131603311907 21.930451078096002 31 24.42677203285175 29.096131329036822 22.543741307080893 23.933355331030537 32 25.4266926740707 30.64028613713476 22.853519005035803 21.079502183758738 33 23.892840584915984 30.254491080490688 23.2096589382352 22.643009396358128 34 21.077831472578758 27.984273038759106 25.330905233085094 25.606990255577045 35 22.529401036119385 27.031828440237966 24.743232575526587 25.695537948116066 36 26.62779478654576 27.709997953378807 24.271535119045133 21.3906721410303 37 23.062914806260153 28.52349507209815 26.587001588567883 21.826588533073814 38 21.788022950002574 30.689432891012547 23.453025866785847 24.06951829219903 39 22.213775849034537 29.12328038571152 26.457103794324315 22.205839970929624 40 23.189610404075424 28.47086766992873 26.18004419031071 22.159477735685137 41 19.288360572886866 29.573119370921553 24.165166507252973 26.97335354893861 42 22.45950961842349 27.38407004735074 24.775950669467893 25.380469664757875 43 25.120813302202414 24.621549111251266 25.778655829320147 24.478981757226173 44 22.4011739530558 24.14386493970821 26.22612797369187 27.22883313354412 45 22.657628119182966 25.923033120456886 24.026636705246172 27.392702055113975 46 24.027193608972834 26.197725883632184 26.399603484546617 23.37547702284837 47 19.92030707671488 27.772231944833116 28.341387553480164 23.966073424971842 48 21.113612537016692 24.966829421780783 28.582387641192497 25.337170400010024 49 22.284502622320424 22.658045796977962 30.538929658882548 24.51852192181907 50 21.623736350637724 24.802682048347595 27.27115781677032 26.30242378424436 51 19.125605458770327 25.11983872068076 24.88468612209836 30.869869698450554 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 213.0 1 410.5 2 608.0 3 858.5 4 1109.0 5 882.5 6 656.0 7 749.0 8 842.0 9 1119.0 10 1396.0 11 1424.5 12 1453.0 13 1514.0 14 1575.0 15 1675.5 16 1776.0 17 1602.0 18 1428.0 19 1648.5 20 1869.0 21 1848.5 22 1828.0 23 1936.5 24 2045.0 25 2835.5 26 4442.5 27 5259.0 28 5849.5 29 6440.0 30 7600.0 31 8760.0 32 10334.5 33 11909.0 34 12565.0 35 13221.0 36 14646.5 37 16072.0 38 19485.0 39 22898.0 40 28483.5 41 34069.0 42 39150.5 43 44232.0 44 49688.5 45 55145.0 46 65668.0 47 76191.0 48 88519.5 49 100848.0 50 95733.0 51 90618.0 52 73913.5 53 57209.0 54 47415.5 55 37622.0 56 34004.0 57 30386.0 58 28052.5 59 25719.0 60 23565.0 61 21411.0 62 17843.0 63 14275.0 64 11779.5 65 9284.0 66 7413.0 67 5542.0 68 4549.5 69 3557.0 70 3343.5 71 3130.0 72 2587.0 73 2044.0 74 1518.0 75 813.0 76 634.0 77 405.5 78 177.0 79 158.5 80 140.0 81 90.5 82 41.0 83 23.5 84 6.0 85 4.0 86 2.0 87 1.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 718257.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.808632937323377 #Duplication Level Percentage of deduplicated Percentage of total 1 64.28713146904795 16.59162978678109 2 13.137303689418184 6.781116974126762 3 6.219390449313139 4.815418956006526 4 3.6368471023529114 3.754482076551778 5 2.334857271275952 3.0129737137700765 6 1.7135604019510013 2.6534790857931427 7 1.1982049691477283 2.1646822562687427 8 0.9051570668728736 1.8688693191637014 9 0.6339418412866964 1.4725055056841339 >10 4.624281346626309 25.587703549325514 >50 1.146470408325141 19.911372231968354 >100 0.1520331216324366 7.123103336699042 >500 0.00703356078726575 1.2156696002764418 >1k 0.003787301962373866 3.0469936075846817 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGCT 4755 0.6620193050676847 No Hit TCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 4644 0.6465652266528554 No Hit CCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 4526 0.6301365667163703 No Hit GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 3849 0.5358806109790785 No Hit TCCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTG 1860 0.2589602328971385 No Hit GCCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTG 1166 0.1623374363215395 No Hit TGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTG 1021 0.14214967623009592 No Hit TTCCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCT 849 0.11820281598369385 No Hit TGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGCTT 845 0.11764591225703333 Illumina Single End Adapter 2 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCC 763 0.10622938586049283 No Hit GTTCCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC 744 0.1035840931588554 No Hit CGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTG 726 0.1010780263888831 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.6929274618973431 0.0 2 0.0 0.0 0.0 2.652671676015688 0.0 3 0.0 0.0 0.0 3.731951098283762 0.0 4 0.0 0.0 0.0 4.835038154866573 0.0 5 0.0 0.0 0.0 6.765127245540246 0.0 6 0.0 0.0 0.0 7.8982871033627235 0.0 7 0.0 0.0 0.0 8.955986506222702 0.0 8 0.0 0.0 0.0 10.780403114762544 0.0 9 0.0 0.0 0.0 11.596823978046855 0.0 10 0.0 0.0 0.0 13.194859221699197 0.0 11 0.0 0.0 0.0 16.025322412451253 0.0 12 0.0 0.0 0.0 18.526794726678613 0.0 13 0.0 0.0 0.0 19.301169358600056 0.0 14 0.0 0.0 0.0 19.60342885624505 0.0 15 1.3922593166512822E-4 0.0 0.0 20.029599433072008 0.0 16 1.3922593166512822E-4 0.0 0.0 21.10344904400514 0.0 17 1.3922593166512822E-4 0.0 0.0 22.682271109087694 0.0 18 1.3922593166512822E-4 0.0 0.0 24.494714287504333 0.0 19 1.3922593166512822E-4 0.0 0.0 25.568006994710807 0.0 20 1.3922593166512822E-4 0.0 0.0 26.64046434632729 0.0 21 1.3922593166512822E-4 0.0 0.0 28.06641633844153 0.0 22 1.3922593166512822E-4 0.0 0.0 29.56058903707169 0.0 23 1.3922593166512822E-4 0.0 0.0 30.915118126241723 0.0 24 1.3922593166512822E-4 0.0 0.0 31.900280818704168 0.0 25 1.3922593166512822E-4 0.0 0.0 32.7573556540347 0.0 26 1.3922593166512822E-4 0.0 0.0 33.544956749464326 0.0 27 1.3922593166512822E-4 0.0 0.0 34.319192155454104 0.0 28 1.3922593166512822E-4 0.0 0.0 35.07491051253242 0.0 29 1.3922593166512822E-4 0.0 0.0 35.90789926168488 0.0 30 1.3922593166512822E-4 0.0 0.0 36.810083298874915 0.0 31 1.3922593166512822E-4 0.0 0.0 37.71700101774156 0.0 32 1.3922593166512822E-4 0.0 0.0 38.604287880243426 0.0 33 1.3922593166512822E-4 0.0 0.0 39.338983121640304 0.0 34 1.3922593166512822E-4 0.0 0.0 40.13103944688322 0.0 35 1.3922593166512822E-4 0.0 0.0 40.95372547709246 0.0 36 1.3922593166512822E-4 0.0 0.0 41.72044268277232 0.0 37 1.3922593166512822E-4 0.0 0.0 42.55788666173807 0.0 38 1.3922593166512822E-4 0.0 0.0 43.30803598154978 0.0 39 1.3922593166512822E-4 0.0 0.0 44.04649032310162 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGCA 30 2.164359E-6 45.000004 12 AATCCGG 55 1.8189894E-12 45.000004 14 ACGTTGG 30 2.164359E-6 45.000004 2 TATTGCG 60 0.0 45.000004 1 ACGATTA 30 2.164359E-6 45.000004 42 CTTTACG 75 0.0 45.000004 1 CGTTTAA 30 2.164359E-6 45.000004 18 TCGCCGA 20 7.0315175E-4 45.0 19 ACAACGA 20 7.0315175E-4 45.0 13 CCTTATG 25 3.88934E-5 45.0 1 TCGTTGC 20 7.0315175E-4 45.0 2 GTCGCAA 25 3.88934E-5 45.0 32 TCCGCAA 25 3.88934E-5 45.0 34 GGTAACC 25 3.88934E-5 45.0 13 ACGCAAT 20 7.0315175E-4 45.0 27 ACCGCAT 25 3.88934E-5 45.0 13 TAGGTGT 25 3.88934E-5 45.0 19 GACGTCC 25 3.88934E-5 45.0 24 CATTGCG 20 7.0315175E-4 45.0 10 GACGTAT 20 7.0315175E-4 45.0 8 >>END_MODULE