##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935292.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 796960 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.28649242120056 33.0 31.0 34.0 30.0 34.0 2 32.437250301144346 34.0 31.0 34.0 30.0 34.0 3 32.49718931941377 34.0 31.0 34.0 30.0 34.0 4 35.95664148765308 37.0 35.0 37.0 35.0 37.0 5 31.562251555912468 37.0 35.0 37.0 0.0 37.0 6 33.3517240513953 37.0 35.0 37.0 17.0 37.0 7 35.13494529211002 37.0 35.0 37.0 32.0 37.0 8 35.715703423007426 37.0 35.0 37.0 35.0 37.0 9 37.75898288496286 39.0 38.0 39.0 35.0 39.0 10 37.53522510540052 39.0 37.0 39.0 35.0 39.0 11 37.42393595663521 39.0 37.0 39.0 35.0 39.0 12 37.12025195743826 39.0 37.0 39.0 34.0 39.0 13 36.96800592250552 39.0 37.0 39.0 33.0 39.0 14 38.120643445091346 40.0 37.0 41.0 33.0 41.0 15 38.253545974703876 40.0 37.0 41.0 34.0 41.0 16 38.352523338687014 40.0 37.0 41.0 34.0 41.0 17 38.34519172856856 40.0 37.0 41.0 34.0 41.0 18 38.33859792210399 40.0 37.0 41.0 34.0 41.0 19 38.388763551495686 40.0 37.0 41.0 34.0 41.0 20 38.281095663521384 40.0 37.0 41.0 34.0 41.0 21 38.20034882553704 40.0 37.0 41.0 34.0 41.0 22 38.182236247741415 40.0 37.0 41.0 34.0 41.0 23 38.1721981027906 40.0 37.0 41.0 34.0 41.0 24 38.14239359566352 40.0 36.0 41.0 34.0 41.0 25 38.05975080305159 40.0 36.0 41.0 34.0 41.0 26 37.96019875527003 40.0 36.0 41.0 34.0 41.0 27 37.88595914475005 40.0 36.0 41.0 34.0 41.0 28 37.87990237904035 40.0 36.0 41.0 34.0 41.0 29 37.83440072274644 40.0 36.0 41.0 34.0 41.0 30 37.81258908853644 40.0 36.0 41.0 34.0 41.0 31 37.558384360570166 39.0 36.0 41.0 33.0 41.0 32 37.55132252559727 39.0 35.0 41.0 33.0 41.0 33 37.58410334270227 39.0 35.0 41.0 33.0 41.0 34 37.55486222646055 39.0 35.0 41.0 33.0 41.0 35 37.47920723750251 39.0 35.0 41.0 33.0 41.0 36 37.456025396506725 39.0 35.0 41.0 33.0 41.0 37 37.376831961453526 39.0 35.0 41.0 33.0 41.0 38 37.36177223449106 39.0 35.0 41.0 33.0 41.0 39 37.35381825938567 39.0 35.0 41.0 33.0 41.0 40 37.243969584420796 39.0 35.0 41.0 33.0 41.0 41 37.16804983938968 39.0 35.0 41.0 33.0 41.0 42 37.16231178478217 39.0 35.0 41.0 33.0 41.0 43 37.12317556715519 39.0 35.0 41.0 33.0 41.0 44 37.054321421401326 39.0 35.0 41.0 32.0 41.0 45 37.03071044970889 39.0 35.0 41.0 32.0 41.0 46 36.872822977313795 39.0 35.0 41.0 32.0 41.0 47 36.79031820919494 39.0 35.0 40.0 32.0 41.0 48 36.78632930134511 39.0 35.0 40.0 32.0 41.0 49 36.79486297932142 39.0 35.0 40.0 32.0 41.0 50 36.6883783376832 38.0 35.0 40.0 32.0 41.0 51 35.94676018871713 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 3.0 10 12.0 11 16.0 12 18.0 13 12.0 14 14.0 15 19.0 16 30.0 17 45.0 18 96.0 19 173.0 20 252.0 21 432.0 22 678.0 23 1049.0 24 1597.0 25 2499.0 26 3613.0 27 4662.0 28 5978.0 29 7851.0 30 10213.0 31 14074.0 32 19368.0 33 29930.0 34 51853.0 35 78903.0 36 67216.0 37 106515.0 38 168580.0 39 221076.0 40 181.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.373444087532626 4.4386167436257775 55.88599176872114 16.301947400120458 2 19.098449106605102 4.848424011242723 52.732006625175664 23.32112025697651 3 20.469408753262396 4.723825537040756 52.76500702670146 22.041758682995383 4 19.75770427624975 4.768746235695644 49.507628990162615 25.965920497891993 5 15.953372816703473 17.083291507729374 44.347897008632806 22.615438666934352 6 21.835725757879942 6.7765007026701465 51.964590443686006 19.423183095763903 7 80.15308171049989 3.5903934952820715 10.197124071471592 6.059400722746436 8 80.5175918490263 3.2107006625175667 9.676520778960048 6.595186709496086 9 76.27308773338687 5.988129893595664 10.976209596466573 6.762572776550893 10 41.671225657498496 24.381273840594258 17.828623770327244 16.118876731580002 11 30.040027102991367 24.5864284280265 24.931615137522588 20.441929331459548 12 27.565122465368404 21.603970086328047 30.918992170246938 19.911915278056615 13 23.773966071070067 26.171200562136114 30.49588436057017 19.55894900622365 14 18.98301043967075 28.152479421802852 31.128663922907045 21.735846215619354 15 15.102389078498293 25.072776550893394 38.68073679983939 21.14409757076892 16 19.32443284481028 23.35299136719534 33.88187612929131 23.44069965870307 17 18.569062437261593 22.572525597269625 30.2012648062638 28.657147159204975 18 20.185203774342504 22.411162417185302 33.33667938165027 24.066954426821923 19 24.264831359164827 23.252860871310983 29.39231580004015 23.08999196948404 20 25.859390684601486 24.013124874523186 29.408502308773336 20.71898213210199 21 23.26151877133106 25.720613330656494 30.01116743625778 21.00670046175467 22 22.037617948203174 24.02893495282072 28.23755270026099 25.69589439871512 23 21.247866894197955 24.01099176872114 27.258959044368602 27.48218229271231 24 21.240212808672958 24.571622164224053 29.35680586227665 24.83135916482634 25 20.103894800240916 24.497841798835577 29.017892993374822 26.380370407548686 26 19.02052800642441 29.16181489660711 27.545924513149973 24.271732583818512 27 21.9206735595262 28.500175667536638 27.971667335876333 21.607483437060832 28 18.13566552901024 27.074759084521183 31.38087231479623 23.408703071672356 29 18.503939971893193 25.042034731981527 31.34749548283477 25.1065298132905 30 22.629366593053604 25.91610620357358 27.290202770528005 24.16432443284481 31 23.386870106404338 29.179758080706687 24.305862276651276 23.127509536237703 32 22.17514053402931 30.17980827143144 24.197324834370608 23.44772636016864 33 23.187738405942582 25.6638978116844 25.610821120256976 25.537542662116042 34 20.029612527604897 26.76520778960048 27.29133206183497 25.913847620959647 35 19.97691226661313 26.36129793214214 26.5781218630797 27.08366793816503 36 24.382403131901224 25.737678177072876 25.668791407347925 24.21112728367798 37 22.130470788998196 28.212080907448307 28.120733788395903 21.5367145151576 38 19.194564344509136 29.07874924713913 26.341472595864285 25.38521381248745 39 21.593053603694038 24.416909255169646 28.62289198956033 25.367145151575986 40 24.269223047580805 22.725356354145752 27.22031218630797 25.785108411965467 41 20.106906243726158 25.974703874723954 25.735796024894597 28.18259385665529 42 21.85994278257378 26.10883858662919 24.995733788395906 27.035484842401125 43 22.402379040353342 24.295071270829148 27.28844609516161 26.01410359365589 44 19.945417586829954 24.900622364986948 28.546727564746032 26.60723248343706 45 22.02444288295523 24.148137924111623 25.737427223449107 28.08999196948404 46 23.127509536237703 25.057342903031522 28.011945392491466 23.80320216823931 47 20.124472997390082 26.620909455932544 28.883381851033928 24.371235695643445 48 20.354471993575586 24.140860269022284 29.17762497490464 26.327042762497488 49 21.276601084119655 22.002986348122867 31.071321019875526 25.64909154788195 50 21.175341296928327 23.06351636217627 28.327519574382652 27.433622766512748 51 20.205405541056013 23.411589038345713 25.673434049387673 30.709571371210597 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 337.0 1 512.0 2 687.0 3 1060.0 4 1433.0 5 1117.0 6 801.0 7 883.0 8 965.0 9 1164.5 10 1364.0 11 1438.5 12 1513.0 13 1586.0 14 1659.0 15 1589.5 16 1520.0 17 1457.0 18 1394.0 19 1436.0 20 1478.0 21 1736.0 22 1994.0 23 2518.5 24 3043.0 25 3410.5 26 4323.0 27 4868.0 28 5703.5 29 6539.0 30 8396.0 31 10253.0 32 11521.0 33 12789.0 34 15006.0 35 17223.0 36 18878.0 37 20533.0 38 23743.0 39 26953.0 40 32330.0 41 37707.0 42 45461.0 43 53215.0 44 58787.0 45 64359.0 46 72667.5 47 80976.0 48 93809.0 49 106642.0 50 98298.0 51 89954.0 52 75894.5 53 61835.0 54 51868.5 55 41902.0 56 37828.0 57 33754.0 58 30700.0 59 27646.0 60 25108.5 61 22571.0 62 19982.0 63 17393.0 64 14965.5 65 12538.0 66 10812.0 67 9086.0 68 7504.0 69 5922.0 70 5119.5 71 4317.0 72 3510.5 73 2704.0 74 2223.0 75 1286.0 76 830.0 77 586.0 78 342.0 79 258.0 80 174.0 81 188.5 82 203.0 83 109.5 84 16.0 85 11.0 86 6.0 87 3.5 88 1.0 89 0.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 796960.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.514001870431212 #Duplication Level Percentage of deduplicated Percentage of total 1 65.41916583548914 16.691047194887197 2 12.850593426003845 6.557401294144263 3 5.936913096294871 4.544232355303648 4 3.4187674358034394 3.4890575500663314 5 2.227325301937521 2.8413990959846345 6 1.5162916521997671 2.3212000830206456 7 1.115070056766705 1.9914929659805285 8 0.8520763291401741 1.739190164434605 9 0.7020403653979955 1.6120673276294402 >10 4.49480736956366 23.961883279495286 >50 1.2672236628133229 22.356110444188424 >100 0.18841097160045933 7.568010102358605 >500 0.007379019775474908 1.2720663115479123 >1k 0.002951607910189963 1.66015008414842 >5k 9.838693033966544E-4 1.3946917468101037 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 5956 0.7473398915880346 TruSeq Adapter, Index 21 (95% over 21bp) CTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGCT 5156 0.6469584420799037 TruSeq Adapter, Index 14 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 4270 0.5357859867496486 TruSeq Adapter, Index 21 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTGC 3139 0.39387171250752867 TruSeq Adapter, Index 21 (95% over 21bp) TCTCTGATGGTAGCTGTGGTAGCACCTGTCTCTTATACACATCTGACGCAG 1941 0.24355049186910258 No Hit TCCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTG 1522 0.19097570768921904 TruSeq Adapter, Index 14 (95% over 21bp) TCTCTGATGGTAGCTGTGGTAGCACTGTGTATAACCTGTCTCTTATACACA 1340 0.16813892792611923 No Hit GCCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTG 1015 0.12735896406344108 No Hit TTCCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCT 967 0.12133607709295322 No Hit CGCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCCGTCTTCTG 928 0.11644248142943184 TruSeq Adapter, Index 14 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGATCGACTCGTATGCC 871 0.10929030315197752 No Hit TTATGTGGGAGGTGAAAAAAATGAGCGCCCACTGCCTTACCTGTCTCTTAT 815 0.10226360168640834 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2547681188516363E-4 0.0 0.0 0.6790805059225056 0.0 2 1.2547681188516363E-4 0.0 0.0 2.487577795623369 0.0 3 1.2547681188516363E-4 0.0 0.0 3.345713712106003 0.0 4 1.2547681188516363E-4 0.0 0.0 4.231203573579602 0.0 5 1.2547681188516363E-4 0.0 0.0 5.732031720538044 0.0 6 1.2547681188516363E-4 0.0 0.0 6.748895804055411 0.0 7 1.2547681188516363E-4 0.0 0.0 7.639655691628187 0.0 8 1.2547681188516363E-4 0.0 0.0 9.005219835374422 0.0 9 1.2547681188516363E-4 0.0 0.0 9.568861674362578 0.0 10 1.2547681188516363E-4 0.0 0.0 10.757127082915078 0.0 11 1.2547681188516363E-4 0.0 0.0 13.360896406344107 0.0 12 1.2547681188516363E-4 0.0 0.0 15.46049989961855 0.0 13 1.2547681188516363E-4 0.0 0.0 16.164801244729976 0.0 14 1.2547681188516363E-4 0.0 0.0 16.395678578598677 0.0 15 1.2547681188516363E-4 0.0 0.0 16.799588436057018 0.0 16 1.2547681188516363E-4 0.0 0.0 17.768394900622365 0.0 17 1.2547681188516363E-4 0.0 0.0 19.211127283677975 0.0 18 1.2547681188516363E-4 0.0 0.0 20.87432242521582 0.0 19 1.2547681188516363E-4 0.0 0.0 21.848900823127885 0.0 20 1.2547681188516363E-4 0.0 0.0 22.877308773338687 0.0 21 1.2547681188516363E-4 0.0 0.0 24.26181991567958 0.0 22 1.2547681188516363E-4 0.0 0.0 25.544192933145954 0.0 23 1.2547681188516363E-4 0.0 0.0 26.830455731780766 0.0 24 1.2547681188516363E-4 0.0 0.0 27.81833467175266 0.0 25 1.2547681188516363E-4 0.0 0.0 28.612979321421403 0.0 26 1.2547681188516363E-4 0.0 0.0 29.67877936157398 0.0 27 1.2547681188516363E-4 0.0 0.0 30.408050592250554 0.0 28 1.2547681188516363E-4 0.0 0.0 31.151249749046375 0.0 29 1.2547681188516363E-4 0.0 0.0 31.97713812487452 0.0 30 1.2547681188516363E-4 0.0 0.0 32.8391638225256 0.0 31 1.2547681188516363E-4 0.0 0.0 33.7271632202369 0.0 32 1.2547681188516363E-4 0.0 0.0 34.5009787191327 0.0 33 1.2547681188516363E-4 0.0 0.0 35.21506725557117 0.0 34 1.2547681188516363E-4 0.0 0.0 35.97244529211002 0.0 35 1.2547681188516363E-4 0.0 0.0 36.70560630395503 0.0 36 1.2547681188516363E-4 0.0 0.0 37.68394900622365 0.0 37 1.2547681188516363E-4 0.0 0.0 38.455129492069865 0.0 38 1.2547681188516363E-4 0.0 0.0 39.185780967677175 0.0 39 1.2547681188516363E-4 0.0 0.0 39.88217727363983 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCCGA 45 3.8380676E-10 45.000004 24 TCTTACG 45 3.8380676E-10 45.000004 1 ACGGGGT 115 0.0 45.000004 5 AACGGTC 90 0.0 45.000004 44 TTTGACG 45 3.8380676E-10 45.000004 1 AACCGAT 20 7.031984E-4 45.0 38 TCGTTAG 35 1.2113014E-7 45.0 1 AGTCCGA 25 3.8897248E-5 45.0 14 TCGCACC 20 7.031984E-4 45.0 44 GTCGACT 20 7.031984E-4 45.0 18 TACCACG 20 7.031984E-4 45.0 1 CACGGGT 35 1.2113014E-7 45.0 4 AAGAGCG 20 7.031984E-4 45.0 31 GCGGTCA 20 7.031984E-4 45.0 23 TTAGCGT 20 7.031984E-4 45.0 34 CGTTGAT 20 7.031984E-4 45.0 25 ATTACCG 20 7.031984E-4 45.0 15 GATCCGA 20 7.031984E-4 45.0 39 TAAACGA 35 1.2113014E-7 45.0 14 CCTGTCG 20 7.031984E-4 45.0 20 >>END_MODULE