##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935290.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1498628 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.1885257715724 33.0 31.0 34.0 30.0 34.0 2 32.345389249366754 34.0 31.0 34.0 30.0 34.0 3 32.39505801306262 34.0 31.0 34.0 30.0 34.0 4 35.891996546174234 37.0 35.0 37.0 35.0 37.0 5 31.811440197300463 37.0 35.0 37.0 0.0 37.0 6 33.48165588791882 37.0 35.0 37.0 17.0 37.0 7 35.226297653587146 37.0 35.0 37.0 32.0 37.0 8 35.75311151266358 37.0 35.0 37.0 35.0 37.0 9 37.78118652527512 39.0 38.0 39.0 35.0 39.0 10 37.41453449421738 39.0 37.0 39.0 35.0 39.0 11 37.323593980627614 39.0 37.0 39.0 34.0 39.0 12 37.21712192752304 39.0 37.0 39.0 34.0 39.0 13 37.19129830751861 39.0 37.0 39.0 34.0 39.0 14 38.34893182297408 40.0 38.0 41.0 34.0 41.0 15 38.41360364279861 40.0 38.0 41.0 34.0 41.0 16 38.47251886392087 40.0 38.0 41.0 34.0 41.0 17 38.47414301614543 40.0 38.0 41.0 34.0 41.0 18 38.447871653272195 40.0 38.0 41.0 34.0 41.0 19 38.47749474852999 40.0 38.0 41.0 34.0 41.0 20 38.408992758709964 40.0 38.0 41.0 34.0 41.0 21 38.353670824247246 40.0 38.0 41.0 34.0 41.0 22 38.33988287954049 40.0 38.0 41.0 34.0 41.0 23 38.29059846739818 40.0 37.0 41.0 34.0 41.0 24 38.2769780092191 40.0 37.0 41.0 34.0 41.0 25 38.20009969118421 40.0 37.0 41.0 34.0 41.0 26 38.17209807904297 40.0 37.0 41.0 34.0 41.0 27 38.138654155667716 40.0 37.0 41.0 34.0 41.0 28 38.08647576316471 40.0 37.0 41.0 34.0 41.0 29 38.04465084063557 40.0 37.0 41.0 34.0 41.0 30 37.97984756724151 40.0 37.0 41.0 34.0 41.0 31 37.75694635359809 40.0 37.0 41.0 33.0 41.0 32 37.805003643332434 40.0 37.0 41.0 33.0 41.0 33 37.787625081074154 40.0 37.0 41.0 33.0 41.0 34 37.760861935049924 40.0 37.0 41.0 33.0 41.0 35 37.70259463989729 40.0 37.0 41.0 33.0 41.0 36 37.69174738494143 40.0 37.0 41.0 33.0 41.0 37 37.631476924226696 40.0 36.0 41.0 33.0 41.0 38 37.62389732475304 40.0 36.0 41.0 33.0 41.0 39 37.592953688306906 39.0 36.0 41.0 33.0 41.0 40 37.574185855329006 39.0 36.0 41.0 33.0 41.0 41 37.55819923289836 40.0 36.0 41.0 33.0 41.0 42 37.529525005538396 40.0 36.0 41.0 33.0 41.0 43 37.472531542183916 39.0 36.0 41.0 33.0 41.0 44 37.42719207168157 39.0 36.0 41.0 32.0 41.0 45 37.43451343495517 39.0 36.0 41.0 32.0 41.0 46 37.31725885276399 39.0 36.0 41.0 32.0 41.0 47 37.26170870956635 39.0 35.0 41.0 32.0 41.0 48 37.24482660139808 39.0 35.0 41.0 32.0 41.0 49 37.2130074975244 39.0 35.0 41.0 32.0 41.0 50 37.14757498191679 39.0 35.0 41.0 32.0 41.0 51 36.44994021198056 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 9.0 11 7.0 12 7.0 13 11.0 14 16.0 15 31.0 16 34.0 17 62.0 18 120.0 19 236.0 20 361.0 21 694.0 22 1112.0 23 1688.0 24 2730.0 25 4261.0 26 6010.0 27 7955.0 28 10260.0 29 13650.0 30 18619.0 31 25717.0 32 35036.0 33 51440.0 34 81845.0 35 109026.0 36 129674.0 37 209254.0 38 351948.0 39 436507.0 40 304.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.793314952076166 4.6964957280926285 57.412580039876474 15.097609279954732 2 19.51191356360618 4.402226569902604 53.11111229738133 22.97474756910988 3 19.638496011018077 4.153332247896076 53.25851378727743 22.949657953808416 4 18.173289168492783 4.440594997557766 51.9715366321729 25.41457920177656 5 14.973295574352008 16.586304272975013 45.801226188220156 22.63917396445282 6 20.49107583736591 6.353477981193464 54.792450161080666 18.362996020359958 7 80.36390618619164 2.063554130845013 11.324424740495974 6.248114942467377 8 81.1305407345919 2.4503746093093146 9.204819341424288 7.214265314674489 9 75.89695374702728 4.878061800526882 12.126291514638723 7.098692937807114 10 35.662819592320446 23.955177669174738 22.287051890128836 18.094950848375984 11 25.495319719103072 26.0938671905236 26.109081106185123 22.3017319841882 12 21.627848939163023 21.752362827866556 33.849627792887894 22.770160440082527 13 22.047232535359008 24.256987057495255 34.23131023843142 19.464470168714318 14 19.14531157832364 26.055298579767626 32.433866176262555 22.36552366564618 15 17.13253722738398 26.245138887035342 34.79035491129219 21.831968974288483 16 18.16828459097254 25.16054684684925 32.22133845090309 24.449830111275116 17 17.775592074884493 25.94159457850781 30.033337159054817 26.249476187552883 18 18.864654870988666 24.705730841809974 33.535607235418 22.894007051783362 19 20.458846358135574 26.707962216107 30.474473985538776 22.358717440218655 20 21.9414691304313 27.015710369751535 30.318931716209757 20.723888783607407 21 21.081482529353515 27.760925326365182 30.682864593481508 20.4747275507998 22 19.75620367429409 26.129966876369586 28.4977993204451 25.616030128891225 23 19.04048236119971 26.840149790341567 27.78307892285477 26.336288925603952 24 20.537184678252373 24.819501570770065 29.580923351225252 25.062390399752303 25 18.611223065363784 26.766148770742305 27.75251763613118 26.870110527762726 26 17.470246118449676 26.812524522429847 30.87924421537566 24.837985143744813 27 18.443469626885392 26.31146622110357 30.25640786105691 24.988656290954125 28 15.798450315888935 26.905743119706827 31.202206284681722 26.093600279722516 29 16.646025564716528 25.256167641335942 31.171845181058945 26.92596161288859 30 19.61193838631068 25.728399576145648 28.082819752466925 26.57684228507675 31 18.28665953125125 29.862447518663735 25.215530471871606 26.635362478213402 32 18.40817067344264 29.844230856490068 25.52167716070966 26.225921309357624 33 19.100470563742302 27.5913702399795 24.342865607742546 28.965293588535644 34 17.75070264268384 26.43811539621574 27.124476521191383 28.686705439909037 35 17.274133407356594 25.450678887622548 28.046720066620935 29.228467638399923 36 17.967500940860575 27.724625457418384 26.578577205283764 27.729296396437274 37 16.785753369081586 30.29237409150236 27.380844345628137 25.541028193787916 38 17.920057545968714 31.521097964271323 25.17569403481051 25.38315045494946 39 18.467291415881725 27.381511622630832 27.019380393266374 27.13181656822107 40 20.328994253410453 22.58352306242777 28.26164998919011 28.825832694971666 41 19.932631713807563 24.421871204862047 26.44959256066215 29.195904520668236 42 20.595171049786874 26.220182727134418 27.16017584083575 26.02447038224296 43 19.560691512503436 26.26795976052763 28.622513392249445 25.548835334719488 44 18.079203111112296 25.072399554792785 27.140090803054527 29.70830653104039 45 19.507576263088637 22.985957822755214 26.574440087867035 30.932025826289113 46 20.400993442001617 22.90822005194084 28.5509145698599 28.13987193619764 47 16.503161558438787 25.339243628171904 30.83353574069082 27.324059072698493 48 17.1112510909979 24.909850876935437 29.869053560990455 28.10984447107621 49 19.62868703907841 22.96106839055456 30.539666948702415 26.870577621664616 50 19.350832895154767 21.081215618552434 28.44988883165135 31.11806265464144 51 17.948683729384477 20.572416903994853 26.049760180645233 35.42913918597544 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 220.0 1 461.0 2 702.0 3 1592.5 4 2483.0 5 1782.5 6 1082.0 7 1154.5 8 1227.0 9 1334.0 10 1441.0 11 1600.5 12 1760.0 13 1828.0 14 1896.0 15 1962.5 16 2029.0 17 2091.5 18 2154.0 19 2230.0 20 2306.0 21 2853.0 22 3400.0 23 4198.0 24 4996.0 25 5726.5 26 8960.0 27 11463.0 28 13571.0 29 15679.0 30 18380.5 31 21082.0 32 25060.0 33 29038.0 34 32057.5 35 35077.0 36 39215.5 37 43354.0 38 48492.5 39 53631.0 40 63197.5 41 72764.0 42 84354.0 43 95944.0 44 111017.0 45 126090.0 46 153814.0 47 181538.0 48 206598.0 49 231658.0 50 213627.5 51 195597.0 52 157519.5 53 119442.0 54 96084.0 55 72726.0 56 60653.0 57 48580.0 58 41911.0 59 35242.0 60 31208.0 61 27174.0 62 22791.5 63 18409.0 64 15265.5 65 12122.0 66 9687.0 67 7252.0 68 6112.5 69 4973.0 70 4050.0 71 3127.0 72 2614.0 73 2101.0 74 1651.0 75 917.5 76 634.0 77 467.0 78 300.0 79 253.5 80 207.0 81 126.5 82 46.0 83 30.5 84 15.0 85 11.5 86 8.0 87 4.5 88 1.0 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1498628.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.149938704551275 #Duplication Level Percentage of deduplicated Percentage of total 1 65.69117789862854 21.776585207693095 2 14.417157966916017 9.558558057941982 3 6.140125795167745 6.106343812441347 4 3.2601637409457074 4.322969127166032 5 1.9469657211497318 3.227089715798804 6 1.2760620478476439 2.5380827201612144 7 0.9081133466661186 2.1072731245136733 8 0.7101718374252686 1.8833722304276965 9 0.5528375413654164 1.6493877548854543 >10 4.831455168250414 31.049394087087308 >50 0.16322773700385176 3.7151405258860364 >100 0.09025320928776384 5.354987439905555 >500 0.006779580328750262 1.516661877873874 >1k 0.004660961476015806 2.6954371943005975 >5k 6.355856558203372E-4 1.7783466269805215 >10k+ 2.1186188527344568E-4 0.7203704969368986 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGCT 10257 0.6844260216678189 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGC 9589 0.6398519178875611 No Hit CCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGC 8954 0.5974798282162085 No Hit GCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGC 6778 0.45228035242902176 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCC 3890 0.25957075404970414 No Hit TCCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTG 3887 0.2593705709488946 No Hit TTCCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCT 2398 0.16001302524709268 No Hit CGCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTG 2375 0.1584782881408862 No Hit GCCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTG 2296 0.1532067998195683 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTC 2291 0.15287316131821904 No Hit CGTTTTTCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTC 1898 0.12664917511216928 No Hit TGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTGCTT 1870 0.12478079950461356 Illumina Single End Adapter 2 (95% over 22bp) TGCTGTCTCTTATACACATCTGACGCTCAACCGATCGTATGCCGTCTTCTG 1843 0.1229791515973277 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.7120512895795355 0.0 2 0.0 0.0 0.0 2.5246425397096544 0.0 3 0.0 0.0 0.0 3.657879073392463 0.0 4 0.0 0.0 0.0 4.906354345441297 0.0 5 0.0 0.0 0.0 7.00474033582717 0.0 6 0.0 0.0 0.0 8.437050422119432 0.0 7 6.672770026984682E-5 0.0 0.0 9.755656507151874 0.0 8 6.672770026984682E-5 0.0 0.0 11.911962141371975 0.0 9 6.672770026984682E-5 0.0 0.0 12.807914972895208 0.0 10 6.672770026984682E-5 0.0 0.0 14.68503190918627 0.0 11 6.672770026984682E-5 0.0 0.0 18.402765729720784 0.0 12 6.672770026984682E-5 0.0 0.0 21.34592440552292 0.0 13 1.3345540053969363E-4 0.0 0.0 22.26363046733412 0.0 14 1.3345540053969363E-4 0.0 0.0 22.567641869763545 0.0 15 1.3345540053969363E-4 0.0 0.0 23.036070325657867 0.0 16 1.3345540053969363E-4 0.0 0.0 24.21554915562768 0.0 17 1.3345540053969363E-4 0.0 0.0 25.969486757220604 0.0 18 1.3345540053969363E-4 0.0 0.0 27.88283683475819 0.0 19 1.3345540053969363E-4 0.0 0.0 29.174218018080538 0.0 20 1.3345540053969363E-4 0.0 0.0 30.474473985538772 0.0 21 1.3345540053969363E-4 0.0 0.0 32.3452517903042 0.0 22 1.3345540053969363E-4 0.0 0.0 34.22617220551064 0.0 23 1.3345540053969363E-4 0.0 0.0 36.162610067341596 0.0 24 2.6691080107938726E-4 0.0 0.0 37.52518970685187 0.0 25 2.6691080107938726E-4 0.0 0.0 38.715078058063774 0.0 26 2.6691080107938726E-4 0.0 0.0 39.74181718211591 0.0 27 2.6691080107938726E-4 0.0 0.0 40.75461021681164 0.0 28 2.6691080107938726E-4 0.0 0.0 41.83272967007156 0.0 29 2.6691080107938726E-4 0.0 0.0 42.92272665397951 0.0 30 2.6691080107938726E-4 0.0 0.0 44.074446760637066 0.0 31 4.003662016190809E-4 0.0 0.0 45.15636969281236 0.0 32 4.003662016190809E-4 0.0 0.0 46.2189415919094 0.0 33 4.003662016190809E-4 0.0 0.0 47.237339753427804 0.0 34 4.003662016190809E-4 0.0 0.0 48.22911356253854 0.0 35 4.003662016190809E-4 0.0 0.0 49.231296892891365 0.0 36 4.003662016190809E-4 0.0 0.0 50.20305239192114 0.0 37 4.003662016190809E-4 0.0 0.0 51.15432248696808 0.0 38 4.003662016190809E-4 0.0 0.0 52.07930186810869 0.0 39 4.003662016190809E-4 0.0 0.0 53.013556399586825 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 30 2.1659453E-6 45.000004 1 CCCTCGT 25 3.8913746E-5 45.000004 14 GTTACGG 120 0.0 45.000004 2 ATAGCCG 20 7.0339744E-4 45.0 22 TTACGGC 20 7.0339744E-4 45.0 3 CGATATC 20 7.0339744E-4 45.0 10 TATCGAG 20 7.0339744E-4 45.0 5 TACCGCG 35 1.2122655E-7 45.0 1 TACGGGT 190 0.0 42.63158 4 TACGGGA 435 0.0 42.413795 4 CGTATGG 160 0.0 42.1875 2 TTACGGG 930 0.0 41.85484 3 GGGCGTA 205 0.0 41.707317 7 TCTACGG 260 0.0 41.53846 2 CGACGGA 60 3.6379788E-12 41.250004 16 ATCCCGT 55 6.184564E-11 40.909092 11 TATGGGA 1605 0.0 40.79439 4 CGTTTTT 1760 0.0 40.78125 1 CTTTACG 95 0.0 40.263157 1 ACGGGTG 90 0.0 40.0 5 >>END_MODULE