##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935289.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2359577 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.27786463421198 33.0 31.0 34.0 30.0 34.0 2 32.41813426728604 34.0 31.0 34.0 30.0 34.0 3 32.47479230387481 34.0 31.0 34.0 30.0 34.0 4 35.95161208979406 37.0 35.0 37.0 35.0 37.0 5 31.563827330068058 37.0 35.0 37.0 0.0 37.0 6 33.38662522986112 37.0 35.0 37.0 17.0 37.0 7 35.25564878789715 37.0 35.0 37.0 32.0 37.0 8 35.82146376236079 37.0 35.0 37.0 35.0 37.0 9 37.88795237451458 39.0 38.0 39.0 35.0 39.0 10 37.4786391798191 39.0 37.0 39.0 35.0 39.0 11 37.35196435632319 39.0 37.0 39.0 34.0 39.0 12 37.227399656802895 39.0 37.0 39.0 34.0 39.0 13 37.22065310858684 39.0 37.0 39.0 34.0 39.0 14 38.41396063786009 40.0 38.0 41.0 34.0 41.0 15 38.48155961852485 40.0 38.0 41.0 34.0 41.0 16 38.537927772647386 40.0 38.0 41.0 34.0 41.0 17 38.535577351364246 40.0 38.0 41.0 34.0 41.0 18 38.50522784380421 40.0 38.0 41.0 34.0 41.0 19 38.525174639352734 40.0 38.0 41.0 34.0 41.0 20 38.44817143072678 40.0 38.0 41.0 34.0 41.0 21 38.396708816876924 40.0 38.0 41.0 34.0 41.0 22 38.382376586989956 40.0 38.0 41.0 34.0 41.0 23 38.343590821575226 40.0 37.0 41.0 34.0 41.0 24 38.3181735539887 40.0 37.0 41.0 34.0 41.0 25 38.256997758496546 40.0 37.0 41.0 34.0 41.0 26 38.22960598446247 40.0 37.0 41.0 34.0 41.0 27 38.19292440975649 40.0 37.0 41.0 34.0 41.0 28 38.1945361393165 40.0 37.0 41.0 34.0 41.0 29 38.16255795000544 40.0 37.0 41.0 34.0 41.0 30 38.09904317595908 40.0 37.0 41.0 34.0 41.0 31 37.90152641765876 40.0 37.0 41.0 33.0 41.0 32 37.93863900182109 40.0 37.0 41.0 34.0 41.0 33 37.95920200951272 40.0 37.0 41.0 34.0 41.0 34 37.927193306257855 40.0 37.0 41.0 34.0 41.0 35 37.875582784541464 40.0 37.0 41.0 33.0 41.0 36 37.884601773962025 40.0 37.0 41.0 33.0 41.0 37 37.85596486149848 40.0 37.0 41.0 33.0 41.0 38 37.84646866790107 40.0 37.0 41.0 33.0 41.0 39 37.84066423770023 40.0 37.0 41.0 33.0 41.0 40 37.76704722922795 40.0 36.0 41.0 33.0 41.0 41 37.689727014630165 40.0 36.0 41.0 33.0 41.0 42 37.69092172029139 40.0 36.0 41.0 33.0 41.0 43 37.68757239115316 40.0 36.0 41.0 33.0 41.0 44 37.66975690981901 40.0 36.0 41.0 33.0 41.0 45 37.66713355826065 40.0 36.0 41.0 33.0 41.0 46 37.545016755121786 40.0 36.0 41.0 33.0 41.0 47 37.50049224924637 39.0 36.0 41.0 33.0 41.0 48 37.471374318363 39.0 35.0 41.0 33.0 41.0 49 37.4802542998173 39.0 36.0 41.0 33.0 41.0 50 37.4207660949399 39.0 35.0 41.0 33.0 41.0 51 36.79544130155532 39.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 5.0 10 5.0 11 15.0 12 15.0 13 20.0 14 16.0 15 38.0 16 60.0 17 106.0 18 196.0 19 293.0 20 593.0 21 964.0 22 1670.0 23 2726.0 24 4158.0 25 6397.0 26 8861.0 27 11580.0 28 14936.0 29 20039.0 30 26759.0 31 36900.0 32 51167.0 33 76477.0 34 125005.0 35 174273.0 36 195820.0 37 313713.0 38 520374.0 39 765724.0 40 668.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.441828768461466 4.535897747774284 59.38827171141268 12.634001772351569 2 19.7284513283525 4.011608860401673 54.447555642388444 21.812384168857385 3 20.105213773485673 3.9354511423022007 53.53336636185214 22.425968722359983 4 18.683603035628842 4.313061196985731 52.575482808995 24.42785295839042 5 15.299310003445532 17.22715554525239 45.759769653628595 21.71376479767348 6 20.359708540980016 6.13300604303229 55.1998938792843 18.307391536703403 7 84.3051106194034 1.9068248249580328 8.880447639555735 4.90761691608284 8 86.81967149196656 1.859782494913283 6.4522581801738195 4.868287832946329 9 82.3788331552647 4.044877535253141 8.566408301148892 5.009881008333273 10 37.740917122009584 25.446467735530565 19.679332354909377 17.13328278755048 11 26.443044664361455 26.697327529468208 25.141243536447423 21.71838426972292 12 22.2835703179002 23.79820620390858 31.754547531188855 22.163675947002364 13 22.210930179434705 25.201974760730415 32.90992410927891 19.67717095055597 14 21.05169697789053 26.33997534303818 31.275478613327728 21.332849065743563 15 19.15707773045762 26.741233704176636 33.217182571282905 20.88450599408284 16 20.304020593521635 25.817805479541462 31.15045620465024 22.727717722286663 17 20.600048228983415 26.39341712518812 27.879191906006884 25.127342739821586 18 21.672062407795973 25.24418571633814 31.329852765983055 21.75389910988283 19 22.45499934945967 26.98920187813324 29.1340354648312 21.42176330757589 20 23.508620401029507 27.992220639546833 28.862503745374703 19.636655214048957 21 23.370544805276538 27.933311775797105 28.821309921227407 19.87483349769895 22 22.16825303857429 25.380608473467912 28.28795161166599 24.16318687629181 23 20.608312422099385 26.31552180751041 27.58248618290482 25.493679587485385 24 21.103274019029683 26.23326130064838 29.15798043462875 23.50548424569319 25 20.063723285995753 27.140754465736865 27.350792112315048 25.44473013595233 26 19.19166020011214 28.04083104725974 28.731887113664868 24.035621638963256 27 19.31621642353693 26.46915103851241 30.96415162548202 23.250480912468632 28 17.654647421974364 24.961507931294467 32.720483374774375 24.663361271956795 29 18.783536201615796 23.4219099440281 32.27875165760643 25.51580219674967 30 21.444987809255643 25.465242287070943 31.141429162938948 21.948340740734462 31 21.613916392641563 27.077607554235357 28.760112511691716 22.548363541431364 32 20.104832349188012 28.55477909811801 27.643132646232775 23.6972559064612 33 21.540767688445854 25.73592639697709 28.376569190155692 24.34673672442137 34 19.90344032002346 25.627135711188913 28.941712857855457 25.527711110932174 35 18.340533070122316 25.44248397064389 28.89089866531162 27.326084293922175 36 20.87352945040573 24.984732432974216 29.760842727319346 24.38089538930071 37 19.050999395230587 26.374261149350076 32.53494164420148 22.03979781121786 38 18.762218821424348 27.437629710749 31.00496402533166 22.795187442494992 39 22.084721117386717 24.317960380186786 30.369934950205057 23.227383552221436 40 23.56655451379633 24.590805894446337 28.21213293738666 23.630506654370677 41 20.11792791674101 26.2452125953084 26.762381562458014 26.874477925492577 42 18.99348908723894 25.23554009892451 28.489470782263094 27.281500031573458 43 19.511548044416436 23.99730968728717 30.46914764807421 26.021994620222184 44 19.309562688566636 23.359441120166878 30.237750240827065 27.09324595043942 45 21.430069881169377 22.807308259065078 28.41026166978234 27.352360189983205 46 22.226610956116286 23.771887927370035 29.768047408497374 24.23345370801631 47 18.780145763414374 24.44997556765471 31.861346334533692 24.908532334397222 48 18.312265291617948 23.745145846056307 32.48175414491665 25.4608347174091 49 20.935659230446813 21.6754528459974 33.046770671183864 24.342117252371928 50 21.55657560655999 21.493682977923587 30.581328772063802 26.368412643452622 51 20.406327066249585 21.898543679651056 27.881734734657947 29.81339451944141 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 344.0 1 720.5 2 1097.0 3 2157.0 4 3217.0 5 2430.0 6 1643.0 7 1800.0 8 1957.0 9 2162.0 10 2367.0 11 2780.0 12 3193.0 13 3305.5 14 3418.0 15 3495.0 16 3572.0 17 3553.5 18 3535.0 19 4324.0 20 5113.0 21 5356.0 22 5599.0 23 7168.0 24 8737.0 25 11364.0 26 17315.0 27 20639.0 28 22182.0 29 23725.0 30 30790.0 31 37855.0 32 42165.5 33 46476.0 34 55069.0 35 63662.0 36 71421.0 37 79180.0 38 90802.0 39 102424.0 40 116112.0 41 129800.0 42 143952.0 43 158104.0 44 178954.5 45 199805.0 46 229616.5 47 259428.0 48 285836.5 49 312245.0 50 293072.5 51 273900.0 52 228861.0 53 183822.0 54 151801.5 55 119781.0 56 103527.0 57 87273.0 58 76126.0 59 64979.0 60 56706.5 61 48434.0 62 41183.0 63 33932.0 64 28734.0 65 23536.0 66 18711.0 67 13886.0 68 10712.0 69 7538.0 70 6138.0 71 4738.0 72 3830.5 73 2923.0 74 2331.0 75 1584.0 76 1429.0 77 886.0 78 343.0 79 206.0 80 69.0 81 40.5 82 12.0 83 29.5 84 47.0 85 27.5 86 8.0 87 35.0 88 62.0 89 31.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2359577.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.269051835960422 #Duplication Level Percentage of deduplicated Percentage of total 1 63.769670346369836 16.75168775890897 2 14.276541301955534 7.500624069985997 3 6.677548340129966 5.262385904520166 4 3.6786022499309885 3.865335727492711 5 2.217639077151446 2.912763793557138 6 1.5139640513089663 2.3862240084969524 7 1.022418758054136 1.8800579947367662 8 0.7416092409914137 1.5585097274904567 9 0.5834778473164253 1.37946688346608 >10 4.243687051506704 24.108870186218702 >50 1.0655556609070678 19.472838197834268 >100 0.19610870869830177 8.131426255502202 >500 0.00849593313531818 1.4365966906348138 >1k 0.003987886981884043 1.6816848867067815 >5k 5.201591715500926E-4 1.1992514778990726 >10k+ 1.7338639051669752E-4 0.4722764365490119 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TCTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGC 10369 0.4394431713819892 TruSeq Adapter, Index 14 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGCT 9822 0.4162610501797568 TruSeq Adapter, Index 21 (95% over 23bp) CCTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGC 8543 0.36205641943450034 TruSeq Adapter, Index 14 (95% over 21bp) GCTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTGC 7965 0.33756050342921634 TruSeq Adapter, Index 14 (95% over 21bp) TCCTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCTG 3821 0.16193580459548468 TruSeq Adapter, Index 21 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCC 2439 0.10336598466589562 No Hit TTCCTGTCTCTTATACACATCTGACGCCTTTGGACTCGTATGCCGTCTTCT 2384 0.10103505840241706 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.238047751779238E-5 0.0 0.0 0.4290599543901301 0.0 2 4.238047751779238E-5 0.0 0.0 1.6407178066238144 0.0 3 4.238047751779238E-5 0.0 0.0 2.3399956856673887 0.0 4 8.476095503558476E-5 0.0 0.0 3.167686411589874 0.0 5 8.476095503558476E-5 0.0 0.0 4.572472099872138 0.0 6 8.476095503558476E-5 0.0 0.0 5.5568858316554195 0.0 7 8.476095503558476E-5 0.0 0.0 6.386907483841384 0.0 8 8.476095503558476E-5 0.0 0.0 7.741896111040242 0.0 9 8.476095503558476E-5 0.0 0.0 8.301403175230137 0.0 10 8.476095503558476E-5 0.0 0.0 9.5549329392514 0.0 11 8.476095503558476E-5 0.0 0.0 12.152940972047109 0.0 12 8.476095503558476E-5 0.0 0.0 14.232296720980074 0.0 13 1.2714143255337714E-4 0.0 0.0 14.876225696385411 0.0 14 1.2714143255337714E-4 0.0 0.0 15.072955873023004 0.0 15 1.2714143255337714E-4 0.0 0.0 15.37233156620869 0.0 16 1.2714143255337714E-4 0.0 0.0 16.23680854661662 0.0 17 1.6952191007116953E-4 0.0 0.0 17.613538358782105 0.0 18 1.6952191007116953E-4 0.0 0.0 19.101516924431795 0.0 19 1.6952191007116953E-4 0.0 0.0 20.123776422638464 0.0 20 1.6952191007116953E-4 0.0 0.0 21.169811368732617 0.0 21 2.119023875889619E-4 0.0 0.0 22.720640182541192 0.0 22 2.119023875889619E-4 0.0 0.0 24.302449125415276 0.0 23 2.119023875889619E-4 0.0 0.0 26.033945914882203 0.0 24 2.119023875889619E-4 0.0 0.0 27.248485639587095 0.0 25 2.119023875889619E-4 0.0 0.0 28.33211206923953 0.0 26 2.119023875889619E-4 0.0 0.0 29.262363550755072 0.0 27 2.119023875889619E-4 0.0 0.0 30.150827881438072 0.0 28 2.119023875889619E-4 0.0 0.0 31.149354312234777 0.0 29 2.119023875889619E-4 0.0 0.0 32.15262735651348 0.0 30 2.966633426245467E-4 0.0 0.0 33.22582818869653 0.0 31 2.966633426245467E-4 0.0 0.0 34.21778564547798 0.0 32 2.966633426245467E-4 0.0 0.0 35.17702537361569 0.0 33 2.966633426245467E-4 0.0 0.0 36.1221947832175 0.0 34 2.966633426245467E-4 0.0 0.0 37.05278530855318 0.0 35 2.966633426245467E-4 0.0 0.0 37.99825138149762 0.0 36 2.966633426245467E-4 0.0 0.0 38.90137935740177 0.0 37 2.966633426245467E-4 0.0 0.0 39.822561416728504 0.0 38 2.966633426245467E-4 0.0 0.0 40.73200408378281 0.0 39 2.966633426245467E-4 0.0 0.0 41.679419658693064 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATCGACT 25 3.8920585E-5 45.000004 27 ACTATCG 20 7.0347986E-4 45.0 14 GTACCGG 20 7.0347986E-4 45.0 3 AATTCGC 20 7.0347986E-4 45.0 13 TTTACGG 985 0.0 44.314724 2 TACGGGA 1085 0.0 42.51152 4 TTACGGG 1805 0.0 42.506924 3 TTTTACG 605 0.0 42.024796 1 GTACGGG 560 0.0 41.383926 3 TTATCCG 120 0.0 41.249996 1 CTTACGG 535 0.0 41.214954 2 TCTTACG 320 0.0 40.78125 1 TTATGGG 5440 0.0 40.491726 3 GTTTACG 245 0.0 40.408165 1 ATGGGCG 775 0.0 40.064514 5 ACGGGCG 335 0.0 39.62686 5 TTCTACG 250 0.0 39.600002 1 GCGATAT 165 0.0 39.545452 9 CTTATGG 1270 0.0 39.507874 2 TATGGGA 3060 0.0 39.485294 4 >>END_MODULE