##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935285.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 980452 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.28754288838209 33.0 31.0 34.0 30.0 34.0 2 32.442701937473736 34.0 31.0 34.0 30.0 34.0 3 32.50170125615532 34.0 31.0 34.0 30.0 34.0 4 35.957662384288064 37.0 35.0 37.0 35.0 37.0 5 31.901016061979576 37.0 35.0 37.0 0.0 37.0 6 33.52453664228336 37.0 35.0 37.0 17.0 37.0 7 35.254581560341556 37.0 35.0 37.0 32.0 37.0 8 35.77053746639305 37.0 35.0 37.0 35.0 37.0 9 37.818846817590256 39.0 38.0 39.0 35.0 39.0 10 37.53097652919266 39.0 37.0 39.0 35.0 39.0 11 37.41165911232778 39.0 37.0 39.0 35.0 39.0 12 37.114917405441574 39.0 37.0 39.0 34.0 39.0 13 36.95858134819451 39.0 37.0 39.0 33.0 39.0 14 38.061717452766686 40.0 37.0 41.0 33.0 41.0 15 38.19257954494458 40.0 37.0 41.0 33.0 41.0 16 38.300340047243516 40.0 37.0 41.0 34.0 41.0 17 38.30124983171027 40.0 37.0 41.0 34.0 41.0 18 38.29953429642654 40.0 37.0 41.0 34.0 41.0 19 38.32795486163525 40.0 37.0 41.0 34.0 41.0 20 38.2381687221812 40.0 37.0 41.0 34.0 41.0 21 38.17257244617789 40.0 37.0 41.0 34.0 41.0 22 38.16036277145643 40.0 36.0 41.0 34.0 41.0 23 38.11230738475724 40.0 36.0 41.0 34.0 41.0 24 38.08336257154863 40.0 36.0 41.0 34.0 41.0 25 37.996803515113434 40.0 36.0 41.0 34.0 41.0 26 37.94806986981515 40.0 36.0 41.0 34.0 41.0 27 37.84311623618494 40.0 36.0 41.0 34.0 41.0 28 37.84847192927344 40.0 36.0 41.0 34.0 41.0 29 37.82315401467894 40.0 36.0 41.0 34.0 41.0 30 37.78101018713818 40.0 36.0 41.0 34.0 41.0 31 37.58715877982808 40.0 35.0 41.0 33.0 41.0 32 37.61959483993097 40.0 35.0 41.0 33.0 41.0 33 37.61332324274926 40.0 35.0 41.0 33.0 41.0 34 37.60844182071126 40.0 35.0 41.0 33.0 41.0 35 37.531932210857846 40.0 35.0 41.0 33.0 41.0 36 37.48845634462472 39.0 35.0 41.0 33.0 41.0 37 37.43285137875184 39.0 35.0 41.0 33.0 41.0 38 37.44166262091362 39.0 35.0 41.0 33.0 41.0 39 37.47779187558391 39.0 35.0 41.0 33.0 41.0 40 37.41856103103466 39.0 35.0 41.0 33.0 41.0 41 37.38640341393561 39.0 35.0 41.0 33.0 41.0 42 37.36416979107595 39.0 35.0 41.0 33.0 41.0 43 37.29351258399187 39.0 35.0 41.0 33.0 41.0 44 37.21951712067495 39.0 35.0 41.0 33.0 41.0 45 37.18011896553834 39.0 35.0 41.0 33.0 41.0 46 37.06940880328665 39.0 35.0 41.0 32.0 41.0 47 37.018172230767036 39.0 35.0 41.0 32.0 41.0 48 37.004877342287024 39.0 35.0 41.0 32.0 41.0 49 37.01017591886191 39.0 35.0 41.0 32.0 41.0 50 36.94552512514636 39.0 35.0 41.0 32.0 41.0 51 36.30108256192042 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 10.0 11 10.0 12 11.0 13 10.0 14 13.0 15 21.0 16 33.0 17 67.0 18 112.0 19 173.0 20 315.0 21 646.0 22 1021.0 23 1504.0 24 2175.0 25 3262.0 26 4400.0 27 5440.0 28 7234.0 29 9193.0 30 12321.0 31 16760.0 32 23296.0 33 36650.0 34 63836.0 35 95567.0 36 77788.0 37 121605.0 38 198835.0 39 297746.0 40 391.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.209193310840305 4.7209858310248745 54.44019697037693 17.62962388775789 2 19.668887411112426 5.405874025449487 52.58625613492553 22.338982428512562 3 19.969361070200275 5.173124232496849 51.43321651646383 23.424298180839042 4 19.19461636061735 4.790953560194685 51.13804653363959 24.876383545548382 5 16.52615324360601 16.29697323275387 44.01520931162362 23.161664212016497 6 20.768176310518005 7.027473043045453 53.49471468261577 18.709635963820766 7 81.54024878321428 2.3943038516928925 10.441918625287112 5.623528739805722 8 82.63250011219316 3.1531375324850166 7.8762652327701925 6.338097122551639 9 77.61532436060102 4.719251936861775 10.472822738900017 7.19260096363718 10 40.061828625980674 25.90305287765235 17.6909221461122 16.34419635025478 11 30.57895746043662 24.487889259239616 24.81722715645437 20.1159261238694 12 27.935686805677378 20.29451722266873 31.375732825268344 20.394063146385545 13 23.430213819748445 26.761738463484193 30.152011521216743 19.656036195550623 14 17.954678046452045 29.488848000718036 30.368136328958478 22.18833762387144 15 15.588116501368757 24.46891841721981 38.377809418513095 21.565155662898334 16 17.896847576423937 23.706616948101487 34.090909090909086 24.30562638456549 17 17.533341764818676 23.211947142746407 29.794217360972286 29.460493731462634 18 19.101394050907132 22.99908613578227 32.42484078771832 25.474679025592277 19 21.65929591657725 25.776070628648828 29.49313173923864 23.071501715535284 20 25.43306556567787 24.609363844430938 29.60073517112515 20.35683541876604 21 22.457805175572084 27.834203000248863 29.068633650601967 20.639358173577087 22 21.04488542019395 25.141363371179825 27.251716555221467 26.562034653404755 23 19.75476616907304 26.95471068445982 26.962972180178124 26.327550966289014 24 21.847474430160783 23.34994471937433 30.633320142138526 24.169260708326366 25 19.82391794804845 25.576570806117992 28.145997968284014 26.45351327754954 26 20.467090688784356 27.507720928714512 27.470391207320706 24.554797175180425 27 19.94070081962197 26.742767621464385 30.159967035612144 23.156564523301498 28 17.633499651181292 23.61431258235997 35.264755439327985 23.487432327130755 29 19.715702553516135 22.32674317559656 33.36930313773647 24.58825113315083 30 22.61558954441421 24.034730920024643 30.96459592106498 22.38508361449617 31 22.92626258093206 25.805036860550036 27.55994174115612 23.70875881736179 32 22.951149061861265 25.46305173532208 28.615271323838392 22.970527878978267 33 22.989906696095268 23.54730267264486 27.93048512318808 25.53230550807179 34 19.98945384373738 22.917797097665158 29.774532562532386 27.31821649606508 35 20.156519646040806 22.420781435501176 30.435962188867993 26.986736729590028 36 23.971494779958633 22.415783740560478 30.017787714237926 23.59493376524297 37 19.08578900343923 24.601000354938336 33.96719064268317 22.346019998939266 38 19.58596647260651 25.027232337738102 31.51597426493087 23.870826924724515 39 21.605545197521142 22.613855650251107 31.02099847825289 24.75960067397486 40 23.97537054338203 21.70968084108146 29.092500193788172 25.22244842174834 41 18.275958435497095 21.798823399819675 29.961181169501415 29.964036995181814 42 20.771644098844206 20.796020610901913 30.031964848865627 28.400370441388255 43 21.681326571826055 21.20297577035898 30.407301938289688 26.708395719525278 44 20.37142052849094 22.656693035457113 30.329582682273077 26.64230375377887 45 21.600649496354745 22.395282991926173 28.42403299702586 27.580034514693224 46 22.97185379804417 22.152333821543532 30.484613219209102 24.3911991612032 47 18.827336779362987 22.294819124240657 33.518214048214496 25.35963004818186 48 19.549146720084206 20.86201058287402 33.82470533998605 25.764137357055727 49 20.849465348635118 18.804796155242684 34.56558811650137 25.780150379620824 50 20.584893498100875 20.598866645179978 30.97040956620008 27.845830290519068 51 18.9075038859628 21.11679103107546 28.6374039728615 31.338301110100243 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 353.0 1 528.0 2 703.0 3 1112.0 4 1521.0 5 1200.0 6 879.0 7 930.5 8 982.0 9 1071.5 10 1161.0 11 1293.5 12 1426.0 13 1576.0 14 1726.0 15 1586.0 16 1446.0 17 1439.5 18 1433.0 19 1939.0 20 2445.0 21 2280.0 22 2115.0 23 2588.0 24 3061.0 25 3685.0 26 5594.5 27 6880.0 28 7431.5 29 7983.0 30 10340.0 31 12697.0 32 15547.0 33 18397.0 34 21027.5 35 23658.0 36 25780.0 37 27902.0 38 31920.5 39 35939.0 40 41331.0 41 46723.0 42 54072.5 43 61422.0 44 68850.0 45 76278.0 46 92929.5 47 109581.0 48 119976.0 49 130371.0 50 122253.5 51 114136.0 52 95439.0 53 76742.0 54 63982.5 55 51223.0 56 45304.0 57 39385.0 58 35357.0 59 31329.0 60 28091.5 61 24854.0 62 22479.0 63 20104.0 64 17479.5 65 14855.0 66 12527.0 67 10199.0 68 8462.0 69 6725.0 70 5435.5 71 4146.0 72 3202.5 73 2259.0 74 1922.0 75 1137.0 76 689.0 77 481.0 78 273.0 79 287.0 80 301.0 81 247.5 82 194.0 83 125.0 84 56.0 85 30.0 86 4.0 87 2.0 88 0.0 89 0.0 90 0.0 91 0.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 980452.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.871831752032175 #Duplication Level Percentage of deduplicated Percentage of total 1 64.76193625799539 15.459860462866981 2 12.927682453163527 6.1721492093123675 3 6.191040941838203 4.433744632005133 4 3.4310127332261278 3.276182348266168 5 2.218809113851929 2.648351892787443 6 1.5467673802691462 2.2154502396789977 7 1.1378035222218987 1.9013017974545539 8 0.8932019356656231 1.705789306303938 9 0.6872344379613261 1.4764990389493655 >10 4.510789990087449 22.136117459905243 >50 1.3933547487956635 23.753082985598496 >100 0.28740102514275545 10.207512702487241 >500 0.006914911883133964 1.1763415825282195 >1k 0.0051861839123504725 2.1950397745895804 >5k 8.643639853917455E-4 1.242576567266258 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 6640 0.6772386613521111 Illumina PCR Primer Index 5 (95% over 23bp) CTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGCT 5404 0.5511743563172904 Illumina PCR Primer Index 5 (95% over 24bp) TCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 4503 0.4592779656729753 Illumina PCR Primer Index 5 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTGC 3446 0.3514705462378576 Illumina PCR Primer Index 5 (95% over 23bp) TCCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTG 1712 0.17461334160162864 Illumina PCR Primer Index 5 (95% over 22bp) GAATGATACGGCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGC 1683 0.17165552214692814 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCG 1599 0.16308804510572675 No Hit CGCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTG 1481 0.1510527797383248 Illumina PCR Primer Index 5 (95% over 22bp) GAATCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTC 1436 0.14646305989482403 No Hit TTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 1119 0.11413103344171872 No Hit TGCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTG 1097 0.11188717040711835 Illumina PCR Primer Index 5 (95% over 22bp) GCCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCTG 1081 0.11025527001831809 Illumina PCR Primer Index 5 (95% over 22bp) TTCCTGTCTCTTATACACATCTGACGCGTTTGCTCTCGTATGCCGTCTTCT 1066 0.10872536340381783 Illumina PCR Primer Index 5 (95% over 21bp) CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 1053 0.10739944433791761 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.0797509720006693E-4 0.0 0.0 0.5697372232398934 0.0 2 4.0797509720006693E-4 0.0 0.0 2.1568623451224536 0.0 3 4.0797509720006693E-4 0.0 0.0 3.0536936025425008 0.0 4 5.099688715000837E-4 0.0 0.0 4.044257138544263 0.0 5 5.099688715000837E-4 0.0 0.0 5.714915161578538 0.0 6 5.099688715000837E-4 0.0 0.0 6.7104763925210005 0.0 7 5.099688715000837E-4 0.0 0.0 7.635355937873552 0.0 8 5.099688715000837E-4 0.0 0.0 9.1457817414825 0.0 9 6.119626458001003E-4 0.0 0.0 9.850456728121316 0.0 10 6.119626458001003E-4 0.0 0.0 11.292138727852052 0.0 11 6.119626458001003E-4 0.0 0.0 13.826480031658868 0.0 12 6.119626458001003E-4 0.0 0.0 16.233329117590664 0.0 13 6.119626458001003E-4 0.0 0.0 16.932292452868676 0.0 14 6.119626458001003E-4 0.0 0.0 17.180749287063517 0.0 15 6.119626458001003E-4 0.0 0.0 17.589642328232284 0.0 16 6.119626458001003E-4 0.0 0.0 18.493715143627632 0.0 17 6.119626458001003E-4 0.0 0.0 19.768739316152143 0.0 18 6.119626458001003E-4 0.0 0.0 21.290588422482692 0.0 19 6.119626458001003E-4 0.0 0.0 22.234540803629347 0.0 20 6.119626458001003E-4 0.0 0.0 23.1722715645437 0.0 21 6.119626458001003E-4 0.0 0.0 24.422511249913306 0.0 22 6.119626458001003E-4 0.0 0.0 25.634503269920405 0.0 23 7.139564201001171E-4 0.0 0.0 26.95205884632802 0.0 24 7.139564201001171E-4 0.0 0.0 27.895705246151774 0.0 25 8.159501944001339E-4 0.0 0.0 28.684015127716606 0.0 26 8.159501944001339E-4 0.0 0.0 29.45366014858453 0.0 27 8.159501944001339E-4 0.0 0.0 30.095506970254537 0.0 28 8.159501944001339E-4 0.0 0.0 30.772133668960848 0.0 29 8.159501944001339E-4 0.0 0.0 31.545858440800775 0.0 30 8.159501944001339E-4 0.0 0.0 32.40128022585501 0.0 31 8.159501944001339E-4 0.0 0.0 33.17633091676084 0.0 32 0.0010199377430001673 0.0 0.0 33.84418615087735 0.0 33 0.0010199377430001673 0.0 0.0 34.555082757748465 0.0 34 0.0010199377430001673 0.0 0.0 35.23548322610388 0.0 35 0.0010199377430001673 0.0 0.0 36.02134525708551 0.0 36 0.0010199377430001673 0.0 0.0 36.72000261104062 0.0 37 0.001121931517300184 0.0 0.0 37.41121441947183 0.0 38 0.001121931517300184 0.0 0.0 38.101712271482945 0.0 39 0.001121931517300184 0.0 0.0 38.84300302309547 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGTA 20 7.0327776E-4 45.000004 37 TATATCG 20 7.0327776E-4 45.000004 43 CACGATA 20 7.0327776E-4 45.000004 18 CTAAGCG 20 7.0327776E-4 45.000004 43 CACGAAC 20 7.0327776E-4 45.000004 42 TCGATCG 20 7.0327776E-4 45.000004 2 ATCGTAA 20 7.0327776E-4 45.000004 21 CGTTAGT 20 7.0327776E-4 45.000004 12 CGCCTAC 20 7.0327776E-4 45.000004 28 AGACGAC 20 7.0327776E-4 45.000004 28 ATATCGT 20 7.0327776E-4 45.000004 44 ACTAGCG 20 7.0327776E-4 45.000004 35 AACATCG 20 7.0327776E-4 45.000004 29 CGCTAAC 20 7.0327776E-4 45.000004 25 AACGCCC 20 7.0327776E-4 45.000004 10 TCGTATC 20 7.0327776E-4 45.000004 29 CGTGTTA 20 7.0327776E-4 45.000004 32 CATCGCA 20 7.0327776E-4 45.000004 22 ACCGTCG 20 7.0327776E-4 45.000004 35 TTCGCTA 20 7.0327776E-4 45.000004 23 >>END_MODULE