##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935284.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 562941 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.24781637862582 33.0 31.0 34.0 30.0 34.0 2 32.398327711074515 34.0 31.0 34.0 30.0 34.0 3 32.45748488740383 34.0 31.0 34.0 30.0 34.0 4 35.933136865142174 37.0 35.0 37.0 35.0 37.0 5 31.7276108863984 37.0 35.0 37.0 0.0 37.0 6 33.45010223096204 37.0 35.0 37.0 17.0 37.0 7 35.216294425170666 37.0 35.0 37.0 32.0 37.0 8 35.75116930548672 37.0 35.0 37.0 35.0 37.0 9 37.7588610529345 39.0 38.0 39.0 35.0 39.0 10 37.498096603374066 39.0 37.0 39.0 35.0 39.0 11 37.395787480393146 39.0 37.0 39.0 35.0 39.0 12 36.983140329093104 39.0 35.0 39.0 34.0 39.0 13 36.75017630622037 39.0 35.0 39.0 33.0 39.0 14 37.80257789004531 40.0 36.0 41.0 33.0 41.0 15 37.98172810294507 40.0 36.0 41.0 33.0 41.0 16 38.10861884282723 40.0 36.0 41.0 34.0 41.0 17 38.1295659758305 40.0 36.0 41.0 34.0 41.0 18 38.134502550000796 40.0 36.0 41.0 34.0 41.0 19 38.158901199237576 40.0 36.0 41.0 34.0 41.0 20 38.06440284150559 40.0 36.0 41.0 34.0 41.0 21 37.99931253896945 40.0 36.0 41.0 34.0 41.0 22 37.952666442842144 40.0 36.0 41.0 34.0 41.0 23 37.929289215033194 40.0 35.0 41.0 34.0 41.0 24 37.887942075634925 39.0 35.0 41.0 34.0 41.0 25 37.81113118426265 39.0 35.0 41.0 34.0 41.0 26 37.77504747389158 39.0 35.0 41.0 34.0 41.0 27 37.72268141776847 39.0 35.0 41.0 34.0 41.0 28 37.742672855592325 39.0 35.0 41.0 34.0 41.0 29 37.6694982245031 39.0 35.0 41.0 34.0 41.0 30 37.63294910123796 39.0 36.0 41.0 34.0 41.0 31 37.427899193698806 39.0 35.0 41.0 33.0 41.0 32 37.431089581323796 39.0 35.0 41.0 33.0 41.0 33 37.45828603708026 39.0 35.0 41.0 33.0 41.0 34 37.443275583053996 39.0 35.0 41.0 33.0 41.0 35 37.35173135372979 39.0 35.0 41.0 33.0 41.0 36 37.37513700370021 39.0 35.0 41.0 33.0 41.0 37 37.292289955785776 39.0 35.0 41.0 33.0 41.0 38 37.24106433889164 39.0 35.0 41.0 33.0 41.0 39 37.254417425627196 39.0 35.0 41.0 33.0 41.0 40 37.221644897067364 39.0 35.0 41.0 33.0 41.0 41 37.21391229276247 39.0 35.0 41.0 33.0 41.0 42 37.216877079480795 39.0 35.0 41.0 33.0 41.0 43 37.14198468400774 39.0 35.0 41.0 33.0 41.0 44 37.055034186531095 39.0 35.0 41.0 33.0 41.0 45 37.00765444336085 39.0 35.0 41.0 33.0 41.0 46 36.92853602775424 39.0 35.0 40.0 32.0 41.0 47 36.87374698236582 39.0 35.0 40.0 32.0 41.0 48 36.89291773027724 39.0 35.0 40.0 33.0 41.0 49 36.9284134571829 39.0 35.0 40.0 33.0 41.0 50 36.84416661781608 38.0 35.0 40.0 32.0 41.0 51 36.164940908549916 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 4.0 10 6.0 11 5.0 12 6.0 13 5.0 14 8.0 15 11.0 16 26.0 17 40.0 18 58.0 19 90.0 20 176.0 21 275.0 22 456.0 23 771.0 24 1143.0 25 1772.0 26 2408.0 27 3054.0 28 4075.0 29 5455.0 30 7195.0 31 10039.0 32 14214.0 33 22926.0 34 41142.0 35 64110.0 36 46448.0 37 69901.0 38 113163.0 39 153802.0 40 157.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 22.31832465569216 5.00212278018478 55.787196171534845 16.892356392588212 2 19.861761712151008 5.233763396164074 52.62718473161486 22.27729016007006 3 19.87668334692268 4.795351555491606 53.031845255541874 22.296119842043836 4 19.570256918575836 4.896072590200394 50.42428957919214 25.109380912031632 5 15.870757326256216 17.198072266898308 44.76721361563645 22.163956791209024 6 20.497707575038948 6.542071016323203 53.57328743154256 19.386933977095293 7 80.41908477087297 2.56563298818171 10.756544646774707 6.258737594170614 8 80.23061031262601 3.3216624832797756 9.054767728767313 7.392959475326899 9 74.29499716666578 6.051611092459068 12.392595316383066 7.260796424492087 10 39.95356529369863 25.751899399759477 18.922764552590767 15.371770753951125 11 32.82617538960566 23.53834593678556 24.78678937934881 18.84868929425997 12 29.194533707795312 20.32433239007285 31.256028606905517 19.22510529522632 13 21.622692253717528 29.679486837874663 30.85563140719898 17.84218950120883 14 16.18677623409913 31.988076903263398 31.38765874221277 20.4374881204247 15 13.142585102168788 24.774709960724124 41.60631398317053 20.47639095393656 16 15.458103069415799 22.926025995619433 37.10122375168979 24.514647183274977 17 15.72988998847126 23.15606786501605 29.782872450221248 31.33116969629144 18 17.94610802908298 23.310968645026744 34.323668022048494 24.419255303841787 19 21.372577232782834 23.835357524145515 30.670354442117382 24.121710800954276 20 24.990007833858254 24.66759393968462 30.430364816206318 19.912033410250807 21 22.549432356143896 27.714272010743578 28.987407206083766 20.748888427028763 22 21.13134413730746 24.31231692131147 27.493644982333848 27.06269395904722 23 19.58624438440263 26.608294652547958 27.173718027288828 26.631742935760588 24 21.28873185644677 23.106861997971368 31.501169749582992 24.10323639599887 25 17.53185502565988 26.232766844127536 29.872935174378846 26.362442955833735 26 16.59516716671907 27.983571990670423 29.351743788425427 26.069517054185077 27 18.714927496842478 27.77022814113735 29.7027574825781 23.812086879442074 28 17.47181320955482 24.413748510057005 33.63922684615262 24.475211434235558 29 17.02096667323929 24.008022155074865 33.54259149715512 25.428419674530723 30 18.900559738942448 26.478796179350944 31.265621086401595 23.355022995305013 31 23.586663611284308 26.3629758713613 27.712850902670084 22.337509614684308 32 23.731083719252993 27.400384765010898 26.14021718084133 22.728314334894776 33 22.052577445949044 24.163278212103933 27.442307453178934 26.341836888768093 34 19.55853277696952 23.96574418988846 30.878546774884047 25.59717625825797 35 18.628950458396172 22.49827246549816 31.14589273120984 27.726884344895826 36 23.32091640154119 21.619494760552172 29.595641461538598 25.46394737636804 37 21.00699718087686 25.514929628504586 30.780490317813058 22.697582872805498 38 20.566808955112524 27.938096532318664 27.179047182564425 24.316047330004388 39 20.011333336886103 25.892944376053617 31.158149788343714 22.937572498716563 40 22.710728122485303 21.921835503187722 31.860710092176625 23.50672628215035 41 19.36632791002965 21.559275305937923 29.39064662193729 29.68375016209514 42 22.173904547723474 20.93381011509199 27.265024221010727 29.62726111617381 43 22.136067545266734 21.98880522115106 27.373738988632912 28.501388244949293 44 20.39432196269236 22.83081175469543 29.38638329771681 27.388482984895397 45 19.512169126071825 25.175462437449042 28.418253422649975 26.894115013829158 46 23.347739816428366 22.414782366180468 31.264910532364848 22.97256728502632 47 18.359650478469327 22.350654864364117 33.956844500578214 25.332850156588343 48 19.200768819467758 20.788857091595744 32.78656200205705 27.22381208687944 49 21.033642957254845 18.50034017774509 34.33308286303538 26.13293400196468 50 21.322305534683032 21.045900014388717 30.86184875502051 26.769945695907744 51 18.76662030301577 20.803245810839858 27.82813829513217 32.6019955910122 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 109.0 1 245.0 2 381.0 3 583.5 4 786.0 5 644.0 6 502.0 7 589.5 8 677.0 9 906.5 10 1136.0 11 1245.0 12 1354.0 13 1479.5 14 1605.0 15 1520.5 16 1436.0 17 1298.0 18 1160.0 19 1414.5 20 1669.0 21 1671.0 22 1673.0 23 1667.0 24 1661.0 25 1842.0 26 2865.5 27 3708.0 28 3843.0 29 3978.0 30 5733.5 31 7489.0 32 8273.0 33 9057.0 34 9806.0 35 10555.0 36 12839.5 37 15124.0 38 16908.0 39 18692.0 40 24235.5 41 29779.0 42 35221.5 43 40664.0 44 47148.0 45 53632.0 46 61000.0 47 68368.0 48 74601.0 49 80834.0 50 74504.0 51 68174.0 52 53465.5 53 38757.0 54 32076.0 55 25395.0 56 21864.0 57 18333.0 58 16105.0 59 13877.0 60 13611.0 61 13345.0 62 11612.0 63 9879.0 64 8368.5 65 6858.0 66 5427.5 67 3997.0 68 2991.5 69 1986.0 70 1860.5 71 1735.0 72 1417.5 73 1100.0 74 902.5 75 536.5 76 368.0 77 304.0 78 240.0 79 155.0 80 70.0 81 54.5 82 39.0 83 24.0 84 9.0 85 9.0 86 9.0 87 5.0 88 1.0 89 6.0 90 11.0 91 6.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 562941.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.65180136869179 #Duplication Level Percentage of deduplicated Percentage of total 1 64.77183105890705 16.615141446095453 2 13.085035511734237 6.713094636985699 3 6.088377876569289 4.6853357984187864 4 3.6387587995965025 3.7336287182331542 5 2.2831372360909334 2.9283291438834302 6 1.5534276147007453 2.3908929967766523 7 1.17695064447735 2.113363290702074 8 0.9116887252953216 1.8709166473081125 9 0.663018605280797 1.5306859409769067 >10 4.47524585195141 24.16668370267309 >50 1.156630326417532 20.3908020356573 >100 0.1826989644731597 8.144631149811259 >500 0.009725420162069337 1.6700538908684004 >1k 0.0034733643435961923 3.046440601609707 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 4557 0.8094986863632245 TruSeq Adapter, Index 27 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGCT 4499 0.7991956528304032 Illumina Single End Adapter 2 (95% over 22bp) TCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 3706 0.6583283150454488 TruSeq Adapter, Index 27 (95% over 22bp) GCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGC 2805 0.49827601826834433 TruSeq Adapter, Index 27 (95% over 22bp) TCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 1529 0.2716092805462739 No Hit TTCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCT 957 0.17000005329155277 No Hit TGCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 889 0.15792063466686562 No Hit GCCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 861 0.1529467564096415 TruSeq Adapter, Index 27 (95% over 21bp) TGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTGCTT 757 0.13447235145423764 TruSeq Adapter, Index 27 (95% over 24bp) ATTTTTGGGCCGATCCTTTTGGGAACATCTCCTGGAAAAACCTTTGCTGGA 691 0.12274820984792367 No Hit CGTTCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTC 654 0.11617558500802037 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCC 622 0.11049115271404995 No Hit TTCTGGGGGGAAAAACCTTTGCTGGATATTTGTTAAATATCAATAGCCCTA 605 0.10747129805787818 No Hit TTCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 605 0.10747129805787818 No Hit CGCTGTCTCTTATACACATCTGACGCTCGATTGCTCGTATGCCGTCTTCTG 602 0.10693838253031844 No Hit CTACACAAAAATAAATAAAGGTAAAAACTCTCATACGCGCATGTCATCGGG 590 0.10480672042007956 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8182029733133668 0.0 2 0.0 0.0 0.0 2.911139888549599 0.0 3 0.0 0.0 0.0 4.0707640765195645 0.0 4 0.0 0.0 0.0 5.3373266470198475 0.0 5 0.0 0.0 0.0 7.452113098886029 0.0 6 0.0 0.0 0.0 8.741413398562194 0.0 7 0.0 0.0 0.0 9.903346887151585 0.0 8 0.0 0.0 0.0 11.83321165095454 0.0 9 0.0 0.0 0.0 12.714476295029142 0.0 10 0.0 0.0 0.0 14.443076627923707 0.0 11 0.0 0.0 0.0 17.426515389712243 0.0 12 1.776385091865755E-4 0.0 0.0 20.127686560403312 0.0 13 1.776385091865755E-4 0.0 0.0 20.95157396601065 0.0 14 1.776385091865755E-4 0.0 0.0 21.214656598115965 0.0 15 1.776385091865755E-4 0.0 0.0 21.663904387848817 0.0 16 1.776385091865755E-4 0.0 0.0 22.759578712511612 0.0 17 1.776385091865755E-4 0.0 0.0 24.462421461574127 0.0 18 1.776385091865755E-4 0.0 0.0 26.453926788064823 0.0 19 1.776385091865755E-4 0.0 0.0 27.539653356213172 0.0 20 1.776385091865755E-4 0.0 0.0 28.702119760330124 0.0 21 1.776385091865755E-4 0.0 0.0 30.238692864794 0.0 22 1.776385091865755E-4 0.0 0.0 31.577376670024034 0.0 23 1.776385091865755E-4 0.0 0.0 32.868098077773695 0.0 24 1.776385091865755E-4 0.0 0.0 33.831786990110864 0.0 25 1.776385091865755E-4 0.0 0.0 34.68587294227992 0.0 26 1.776385091865755E-4 0.0 0.0 35.39465059393436 0.0 27 1.776385091865755E-4 0.0 0.0 36.09685562074889 0.0 28 1.776385091865755E-4 0.0 0.0 36.81114006618811 0.0 29 1.776385091865755E-4 0.0 0.0 37.59417061468253 0.0 30 1.776385091865755E-4 0.0 0.0 38.55057634814305 0.0 31 1.776385091865755E-4 0.0 0.0 39.34550867675298 0.0 32 1.776385091865755E-4 0.0 0.0 40.071694902307705 0.0 33 1.776385091865755E-4 0.0 0.0 40.79006503345821 0.0 34 1.776385091865755E-4 0.0 0.0 41.55248951488699 0.0 35 1.776385091865755E-4 0.0 0.0 42.37388998136572 0.0 36 3.55277018373151E-4 0.0 0.0 43.109135770888955 0.0 37 3.55277018373151E-4 0.0 0.0 43.83976295917334 0.0 38 3.55277018373151E-4 0.0 0.0 44.4966701661453 0.0 39 3.55277018373151E-4 0.0 0.0 45.22694207741131 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AAACTCG 25 3.8882597E-5 45.000004 17 GGTACTA 25 3.8882597E-5 45.000004 8 CACGGGA 25 3.8882597E-5 45.000004 4 CAACGAA 25 3.8882597E-5 45.000004 12 GCTATCG 25 3.8882597E-5 45.000004 25 TCTTACG 25 3.8882597E-5 45.000004 1 GGTCCAC 25 3.8882597E-5 45.000004 8 ATAGCAG 25 3.8882597E-5 45.000004 15 GCACGGG 35 1.2104465E-7 45.000004 3 TTGTACG 70 0.0 45.000004 1 CAATTAG 25 3.8882597E-5 45.000004 27 CGTTATT 35 1.2104465E-7 45.000004 1 CATTAGG 25 3.8882597E-5 45.000004 17 GGCCAGA 25 3.8882597E-5 45.000004 8 TGCGCAA 25 3.8882597E-5 45.000004 1 GGGCGTA 25 3.8882597E-5 45.000004 7 TACGAAA 25 3.8882597E-5 45.000004 20 TCGCTAT 25 3.8882597E-5 45.000004 23 GCCCTAC 100 0.0 45.000004 26 TTGCGAT 25 3.8882597E-5 45.000004 17 >>END_MODULE