##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935283.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 584073 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.238358903767164 33.0 31.0 34.0 30.0 34.0 2 32.381632090509235 34.0 31.0 34.0 30.0 34.0 3 32.44502998768989 34.0 31.0 34.0 30.0 34.0 4 35.92170499235541 37.0 35.0 37.0 35.0 37.0 5 31.776004026893897 37.0 35.0 37.0 0.0 37.0 6 33.49405810575048 37.0 35.0 37.0 17.0 37.0 7 35.22409185153226 37.0 35.0 37.0 32.0 37.0 8 35.763459362100285 37.0 35.0 37.0 35.0 37.0 9 37.78313498483922 39.0 38.0 39.0 35.0 39.0 10 37.521080412893596 39.0 37.0 39.0 35.0 39.0 11 37.38584560491582 39.0 37.0 39.0 35.0 39.0 12 37.02957335812476 39.0 35.0 39.0 34.0 39.0 13 36.84131778048292 39.0 35.0 39.0 33.0 39.0 14 37.889405947544226 40.0 36.0 41.0 33.0 41.0 15 38.07252689304248 40.0 36.0 41.0 33.0 41.0 16 38.19986371566568 40.0 36.0 41.0 34.0 41.0 17 38.24035351745415 40.0 36.0 41.0 34.0 41.0 18 38.25567865660628 40.0 36.0 41.0 34.0 41.0 19 38.28589234564858 40.0 37.0 41.0 34.0 41.0 20 38.17558764058602 40.0 36.0 41.0 34.0 41.0 21 38.10194444872473 40.0 36.0 41.0 34.0 41.0 22 38.06934920806132 40.0 36.0 41.0 34.0 41.0 23 38.04787415271721 40.0 36.0 41.0 34.0 41.0 24 38.01685063339685 40.0 36.0 41.0 34.0 41.0 25 37.92179059809305 40.0 36.0 41.0 34.0 41.0 26 37.8609557366973 40.0 36.0 41.0 34.0 41.0 27 37.78867710029397 40.0 35.0 41.0 34.0 41.0 28 37.7834911047078 40.0 36.0 41.0 34.0 41.0 29 37.76943293047273 40.0 36.0 41.0 34.0 41.0 30 37.65929601265595 39.0 36.0 41.0 33.0 41.0 31 37.37695288088989 39.0 35.0 41.0 33.0 41.0 32 37.4259655899177 39.0 35.0 41.0 33.0 41.0 33 37.440263460218155 39.0 35.0 41.0 33.0 41.0 34 37.4031088579681 39.0 35.0 41.0 33.0 41.0 35 37.36530878845624 39.0 35.0 41.0 33.0 41.0 36 37.35688860810207 39.0 35.0 41.0 33.0 41.0 37 37.264609047156775 39.0 35.0 41.0 33.0 41.0 38 37.2802098367841 39.0 35.0 41.0 33.0 41.0 39 37.28935595379345 39.0 35.0 41.0 33.0 41.0 40 37.13689727140272 39.0 35.0 41.0 33.0 41.0 41 37.12198988825027 39.0 35.0 41.0 33.0 41.0 42 37.19403738916197 39.0 35.0 41.0 33.0 41.0 43 37.160755590482694 39.0 35.0 41.0 33.0 41.0 44 37.08999388775033 39.0 35.0 41.0 33.0 41.0 45 37.0825804308708 39.0 35.0 41.0 33.0 41.0 46 36.93308884334664 39.0 35.0 40.0 32.0 41.0 47 36.88928781162629 39.0 35.0 40.0 32.0 41.0 48 36.92330753176401 39.0 35.0 40.0 33.0 41.0 49 36.96117779798073 39.0 35.0 40.0 33.0 41.0 50 36.85647342027452 39.0 35.0 40.0 32.0 41.0 51 36.24117190830598 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 3.0 11 4.0 12 4.0 13 6.0 14 7.0 15 7.0 16 16.0 17 28.0 18 54.0 19 111.0 20 179.0 21 299.0 22 472.0 23 770.0 24 1168.0 25 1792.0 26 2508.0 27 3261.0 28 4151.0 29 5458.0 30 7351.0 31 10341.0 32 14575.0 33 23090.0 34 40454.0 35 61629.0 36 48925.0 37 77496.0 38 125134.0 39 154650.0 40 126.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.366988373028715 3.985289510044121 54.55533811698196 17.092383999945213 2 18.872469708409735 4.787757694671728 52.7630963937727 23.57667620314584 3 20.456347066205765 4.587440268596563 52.41399619568102 22.542216469516653 4 18.148073956508863 5.077105087891411 51.228185517906155 25.546635437693578 5 15.657118202690418 16.53954214627281 44.0648686037533 23.738471047283475 6 20.820856297072453 5.912617087247655 53.829230250328294 19.437296365351592 7 80.65909569522988 2.3664850112913967 10.85052724573812 6.123892047740608 8 80.48240545274307 2.621590109455496 9.084138455295827 7.811865982505611 9 75.10550907164001 5.358063118822476 12.384924487178829 7.151503322358678 10 40.661698109654104 25.601080686831956 18.341714135048186 15.395507068465758 11 30.564672566614103 24.84466838905411 24.872233436573854 19.718425607757933 12 28.618169304179442 20.102624158281586 30.954692307297204 20.324514230241768 13 22.80502608406826 28.019613986607837 30.411267084765086 18.764092844558814 14 16.870665139460307 30.82097614510515 30.38900959297896 21.919349122455582 15 13.442840192921091 25.225271498596925 40.511374434360086 20.8205138741219 16 15.409546409438546 23.314551434495346 37.00992855345137 24.26597360261474 17 15.56397916013923 23.132382424799637 30.26265552422386 31.040982890837277 18 17.555682252047262 22.895939377440833 33.44239504308536 26.105983327426536 19 22.64956606451591 23.87355690127775 30.374456617580336 23.102420416626003 20 24.112910543716282 25.313787831315604 29.78531793114902 20.787983693819097 21 22.860156179107747 26.612084448348067 28.783388377822632 21.74437099472155 22 18.739609603594072 25.657922896624225 27.97355809975808 27.628909400023627 23 18.78737760519661 27.065966069309827 26.792370131815712 27.354286193677847 24 22.335393007380926 23.121424890381853 30.29758266518055 24.24559943705667 25 17.53496566353863 25.580706521273882 29.532096159212973 27.352231655974514 26 16.989999537729016 27.713145445860366 29.95704304085277 25.33981197555785 27 18.522171029991114 28.654979771364196 28.07696983082594 24.74587936781875 28 15.176527591585298 27.328946895336713 32.6551646797575 24.83936083332049 29 16.16972535967251 23.909340099610837 30.73999311729869 29.180941423417963 30 19.75506486346741 25.944017271813625 27.590558029561375 26.710359835157593 31 19.708666553667094 31.357552908626147 22.868031906970533 26.065748630736223 32 20.053315253401543 29.801240598349864 23.527024875315245 26.618419272933348 33 20.028489589486245 27.298984887163076 22.563275480975836 30.109250042374843 34 16.827006213264436 27.287684929794736 27.071273625043446 28.814035231897385 35 15.61328806501927 25.2696152706939 28.323685566701425 30.793411097585405 36 20.288388608958126 24.479474312286307 27.147976365967953 28.084160712787615 37 17.03656905900461 29.888044816315766 27.823748058889898 25.251638065789724 38 16.684044631407374 30.50046826338488 23.51640976384801 29.299077341359727 39 18.387941233373226 26.537436245126894 26.238843432242202 28.83577908925768 40 21.139994486990496 25.391860264042336 27.337678680575888 26.13046656839128 41 16.257043212064247 27.504781080447138 25.44767520498294 30.79050050250568 42 19.02176611485208 25.29101670510364 25.609298837645294 30.07791834239898 43 20.966386051058684 22.39514581225292 27.094387174205963 29.54408096248243 44 18.777104916679935 24.3779459074465 27.215604898702733 29.629344277170834 45 18.486216620182752 24.22488284854804 25.188632242887447 32.10026828838176 46 19.603029073420615 25.211745792049967 28.48924706329517 26.695978071234244 47 14.874681760670327 26.02294576191675 30.988249756451676 28.114122720961248 48 17.172168547424725 23.898040142242493 29.47987665925321 29.449914651079574 49 19.210783583558904 20.86656976097166 31.36234682993393 28.560299825535505 50 18.381435197312666 23.453917575371573 28.05265780133648 30.111989425979285 51 16.86724090995475 23.90642950453111 24.7517005579782 34.47462902753594 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 229.0 1 393.0 2 557.0 3 724.0 4 891.0 5 686.0 6 481.0 7 548.0 8 615.0 9 820.0 10 1025.0 11 1206.0 12 1387.0 13 1321.5 14 1256.0 15 1245.5 16 1235.0 17 1176.5 18 1118.0 19 1087.0 20 1056.0 21 1311.5 22 1567.0 23 1679.0 24 1791.0 25 1913.0 26 2869.5 27 3704.0 28 4310.5 29 4917.0 30 5655.5 31 6394.0 32 8349.0 33 10304.0 34 11089.5 35 11875.0 36 13267.5 37 14660.0 38 16351.0 39 18042.0 40 22813.0 41 27584.0 42 33863.5 43 40143.0 44 45180.5 45 50218.0 46 59655.0 47 69092.0 48 76180.5 49 83269.0 50 77549.5 51 71830.0 52 56791.5 53 41753.0 54 35207.5 55 28662.0 56 24502.5 57 20343.0 58 18785.5 59 17228.0 60 16649.5 61 16071.0 62 14089.5 63 12108.0 64 9333.5 65 6559.0 66 5761.0 67 4963.0 68 4156.0 69 3349.0 70 2734.0 71 2119.0 72 1908.5 73 1698.0 74 1260.0 75 587.5 76 353.0 77 385.0 78 417.0 79 275.0 80 133.0 81 91.5 82 50.0 83 87.0 84 124.0 85 66.5 86 9.0 87 22.5 88 36.0 89 18.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 584073.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.468881561717673 #Duplication Level Percentage of deduplicated Percentage of total 1 64.89731026300592 17.177592190255485 2 13.17472391325692 6.974404137366539 3 6.176398284763525 4.904470640322057 4 3.517282894417009 3.7239417740551737 5 2.318947373995689 3.068997169507405 6 1.5789136242486825 2.5075246629852463 7 1.147345035869455 2.1258257905397318 8 0.8315328970333056 1.760779661299723 9 0.6961170270113497 1.6582895226952592 >10 4.44718507309598 25.616198363352716 >50 1.069906552659133 18.879829190036077 >100 0.13139203278270054 6.585891306177445 >500 0.008414268109236981 1.4968246278048056 >1k 0.004530759751127604 3.519430963602395 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCT 4799 0.8216438698587334 RNA PCR Primer, Index 16 (95% over 24bp) CCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 4636 0.7937363993884327 RNA PCR Primer, Index 16 (95% over 23bp) TCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 4048 0.6930640519250162 RNA PCR Primer, Index 14 (95% over 23bp) GCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGC 3525 0.6035204503546646 RNA PCR Primer, Index 14 (95% over 23bp) TCCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 1516 0.25955659652132523 RNA PCR Primer, Index 16 (95% over 22bp) TTCCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCT 1010 0.1729235900306982 RNA PCR Primer, Index 14 (95% over 21bp) GCCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 1009 0.1727523785554203 RNA PCR Primer, Index 14 (95% over 22bp) TGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTGCTT 826 0.14142067857956112 RNA PCR Primer, Index 14 (96% over 25bp) TGCTTTGGGATCGTTCTCTTAAAGTGCCAGTGTTTTAAATAGCGTTCTTGT 799 0.1367979687470573 No Hit TTTTTTGGGGGGAATTCTGGACATTAATTAGGGCTGAAAGCCCTAACTTAA 777 0.13303131629094309 No Hit TGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 762 0.1304631441617743 RNA PCR Primer, Index 14 (95% over 22bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCC 749 0.12823739498316136 No Hit TGTTTTGGGATGGTCAGTGCGAAATTTGAGGACGACGCTGCAGCCTTTAAA 704 0.120532878595655 No Hit TTCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 685 0.11727986056537454 RNA PCR Primer, Index 14 (95% over 22bp) TTTCCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTC 648 0.11094503598009153 No Hit CGCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTCTG 607 0.10392536549369685 RNA PCR Primer, Index 16 (95% over 22bp) CGTTCTGTCTCTTATACACATCTGACGCTCACCAACTCGTATGCCGTCTTC 598 0.10238446221619557 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.8622209894996002 0.0 2 0.0 0.0 0.0 3.1139943123547913 0.0 3 0.0 0.0 0.0 4.286792918008537 0.0 4 0.0 0.0 0.0 5.534924572784567 0.0 5 0.0 0.0 0.0 7.638771180999635 0.0 6 0.0 0.0 0.0 8.942204142290432 0.0 7 0.0 0.0 0.0 10.09685433156472 0.0 8 0.0 0.0 0.0 12.017162238281859 0.0 9 0.0 0.0 0.0 12.872363557295063 0.0 10 0.0 0.0 0.0 14.529348215034764 0.0 11 0.0 0.0 0.0 17.535821720915024 0.0 12 0.0 0.0 0.0 20.062389461591273 0.0 13 0.0 0.0 0.0 20.869137933100827 0.0 14 0.0 0.0 0.0 21.163964093529405 0.0 15 0.0 0.0 0.0 21.581206458781693 0.0 16 0.0 0.0 0.0 22.67165234482676 0.0 17 0.0 0.0 0.0 24.26203573868335 0.0 18 0.0 0.0 0.0 26.173954283111872 0.0 19 0.0 0.0 0.0 27.238376024914693 0.0 20 0.0 0.0 0.0 28.33635521587199 0.0 21 0.0 0.0 0.0 29.803808770479034 0.0 22 0.0 0.0 0.0 31.190621720230176 0.0 23 0.0 0.0 0.0 32.55414990934352 0.0 24 3.4242295055583803E-4 0.0 0.0 33.506256923364035 0.0 25 3.4242295055583803E-4 0.0 0.0 34.348274958780834 0.0 26 3.4242295055583803E-4 0.0 0.0 35.11273419589675 0.0 27 3.4242295055583803E-4 0.0 0.0 35.846546578937904 0.0 28 3.4242295055583803E-4 0.0 0.0 36.64867234061496 0.0 29 6.848459011116761E-4 0.0 0.0 37.44822993016284 0.0 30 6.848459011116761E-4 0.0 0.0 38.381674893378054 0.0 31 6.848459011116761E-4 0.0 0.0 39.276083640229906 0.0 32 6.848459011116761E-4 0.0 0.0 40.046535278980535 0.0 33 6.848459011116761E-4 0.0 0.0 40.864583707858436 0.0 34 6.848459011116761E-4 0.0 0.0 41.59034915156153 0.0 35 6.848459011116761E-4 0.0 0.0 42.3892218952083 0.0 36 6.848459011116761E-4 0.0 0.0 43.0855389651636 0.0 37 6.848459011116761E-4 0.0 0.0 43.815755907223924 0.0 38 6.848459011116761E-4 0.0 0.0 44.48930185096726 0.0 39 6.848459011116761E-4 0.0 0.0 45.20291127992562 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGCATA 30 2.1636606E-6 45.000004 19 CCGGGTT 30 2.1636606E-6 45.000004 5 GAGCTTA 30 2.1636606E-6 45.000004 9 TCGGGTA 60 0.0 45.000004 5 TACGCGC 30 2.1636606E-6 45.000004 34 GTAGATT 30 2.1636606E-6 45.000004 9 TGCGAAT 30 2.1636606E-6 45.000004 27 ACGGACG 30 2.1636606E-6 45.000004 11 GTCAAGG 30 2.1636606E-6 45.000004 26 ATGCGTC 30 2.1636606E-6 45.000004 18 ATGCGAA 30 2.1636606E-6 45.000004 26 AAGGACG 30 2.1636606E-6 45.000004 39 TAATGCG 30 2.1636606E-6 45.000004 24 CGGACGG 30 2.1636606E-6 45.000004 12 TATTTCG 20 7.0304336E-4 45.0 1 AGCGTGT 20 7.0304336E-4 45.0 16 GCCCATA 20 7.0304336E-4 45.0 23 GTCGCAA 20 7.0304336E-4 45.0 40 ACACGTA 35 1.2105556E-7 45.0 12 TCGCAAT 20 7.0304336E-4 45.0 41 >>END_MODULE