##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935280.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1259475 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.2423128684571 33.0 31.0 34.0 30.0 34.0 2 32.388130768772704 34.0 31.0 34.0 30.0 34.0 3 32.446154151531395 34.0 31.0 34.0 30.0 34.0 4 35.916431052621135 37.0 35.0 37.0 35.0 37.0 5 31.793473471089143 37.0 35.0 37.0 0.0 37.0 6 33.48817086484448 37.0 35.0 37.0 17.0 37.0 7 35.20394211873995 37.0 35.0 37.0 32.0 37.0 8 35.74104210087536 37.0 35.0 37.0 35.0 37.0 9 37.762030211000614 39.0 38.0 39.0 35.0 39.0 10 37.49220826137875 39.0 37.0 39.0 35.0 39.0 11 37.370142321205265 39.0 37.0 39.0 35.0 39.0 12 37.10260306873896 39.0 37.0 39.0 34.0 39.0 13 36.98111355922111 39.0 37.0 39.0 33.0 39.0 14 38.105782171142735 40.0 37.0 41.0 33.0 41.0 15 38.22575120585959 40.0 37.0 41.0 34.0 41.0 16 38.30574326604339 40.0 37.0 41.0 34.0 41.0 17 38.32536096389369 40.0 37.0 41.0 34.0 41.0 18 38.32016038428711 40.0 37.0 41.0 34.0 41.0 19 38.321054407590466 40.0 37.0 41.0 34.0 41.0 20 38.24513467913218 40.0 37.0 41.0 34.0 41.0 21 38.18247523769825 40.0 37.0 41.0 34.0 41.0 22 38.14012425812342 40.0 37.0 41.0 34.0 41.0 23 38.11047142658647 40.0 37.0 41.0 34.0 41.0 24 38.10328192302348 40.0 36.0 41.0 34.0 41.0 25 38.00193255126144 40.0 36.0 41.0 34.0 41.0 26 37.940229063697174 40.0 36.0 41.0 34.0 41.0 27 37.83799202048473 40.0 36.0 41.0 33.0 41.0 28 37.776724428829475 40.0 36.0 41.0 33.0 41.0 29 37.731074455626356 40.0 36.0 41.0 33.0 41.0 30 37.69522856745866 40.0 36.0 41.0 33.0 41.0 31 37.45860537128566 39.0 35.0 41.0 33.0 41.0 32 37.50204886956867 39.0 35.0 41.0 33.0 41.0 33 37.48424303777367 39.0 35.0 41.0 33.0 41.0 34 37.47242144544354 39.0 35.0 41.0 33.0 41.0 35 37.407681772166974 39.0 35.0 41.0 33.0 41.0 36 37.35046745667838 39.0 35.0 41.0 33.0 41.0 37 37.291036344508626 39.0 35.0 41.0 33.0 41.0 38 37.292317036860595 39.0 35.0 41.0 33.0 41.0 39 37.309656801445044 39.0 35.0 41.0 33.0 41.0 40 37.23977530320173 39.0 35.0 41.0 33.0 41.0 41 37.19583239048016 39.0 35.0 41.0 33.0 41.0 42 37.152508783421666 39.0 35.0 41.0 33.0 41.0 43 37.079179023005615 39.0 35.0 41.0 32.0 41.0 44 37.011454772822006 39.0 35.0 41.0 32.0 41.0 45 37.00436769288791 39.0 35.0 41.0 32.0 41.0 46 36.885172790249904 39.0 35.0 41.0 32.0 41.0 47 36.7971567518212 39.0 35.0 40.0 32.0 41.0 48 36.770963298199646 39.0 35.0 40.0 32.0 41.0 49 36.750258639512495 39.0 35.0 40.0 32.0 41.0 50 36.661327140276704 38.0 35.0 40.0 32.0 41.0 51 36.01390182417277 37.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 11.0 11 10.0 12 13.0 13 15.0 14 25.0 15 37.0 16 52.0 17 80.0 18 155.0 19 254.0 20 487.0 21 860.0 22 1300.0 23 1846.0 24 2912.0 25 4294.0 26 5758.0 27 7358.0 28 9700.0 29 12395.0 30 16892.0 31 22680.0 32 31606.0 33 48748.0 34 82246.0 35 118192.0 36 108446.0 37 169446.0 38 268479.0 39 344857.0 40 314.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.40086147005697 4.595327418170269 54.842295400861474 17.161515710911292 2 19.57053534210683 4.977867762361302 52.506242680481954 22.94535421504992 3 21.1576252009766 4.660513309116894 50.373608050973615 23.808253438932887 4 19.771095099148457 4.900295758153199 49.8618074991564 25.466801643541952 5 16.048432878778858 16.930784652335298 43.07556720061931 23.94521526826654 6 21.48339585938586 6.087457075368706 52.51553226542806 19.913614799817385 7 81.27854860159988 2.7783798805057662 10.237281406935429 5.705790110958931 8 82.01401377558109 3.0334861747950534 8.365628535699399 6.586871513924453 9 77.19065483634054 5.352309494035213 11.141547073185256 6.315488596438993 10 40.014926854443324 26.289525397487047 17.307052541733658 16.388495206335975 11 29.412175708132356 25.221699517656166 24.82383532821215 20.542289445999327 12 26.80243752357133 20.696639472796203 31.548224458603784 20.952698545028685 13 22.845630123662637 24.886162885329206 32.457254014569564 19.810952976438596 14 18.492070108576986 26.79068659560531 32.29615514400842 22.421088151809286 15 16.294487782607835 24.36793108239544 37.33515949105779 22.002421643938945 16 18.316758967029916 24.411282478810612 33.64536810972826 23.626590444431212 17 18.62561781694754 22.945195418726055 29.81591536155938 28.613271402767026 18 20.209055360368406 22.621171519879315 32.673296413188034 24.496476706564245 19 22.8835824450664 23.929891423013558 29.721510947021578 23.46501518489847 20 24.655273030429345 25.447984279163936 28.989380495841523 20.907362194565195 21 23.546160106393536 26.213779551003398 29.1846999741956 21.05536036840747 22 21.722701919450564 24.490124853609636 28.1963516544592 25.5908215724806 23 21.169614323428412 24.886242283491136 27.84811131622303 26.096032076857423 24 21.951051033168582 23.55719645090216 29.255761329125228 25.235991186804025 25 20.285912781119116 24.9878719307648 27.799519641120305 26.926695646995775 26 20.547609122848804 27.52170547251831 27.26644038190516 24.664245022727723 27 20.67472558010282 28.878620059945614 27.38656980090911 23.06008455904246 28 18.140971436511244 27.536711725123563 30.664443518132558 23.657873320232635 29 19.207447547589275 26.54510808074793 28.549117687925524 25.69832668373727 30 21.257111097878084 27.35306377657357 26.871593322614583 24.518231802933762 31 21.580658607753232 29.0151848984696 23.657793922070706 25.746362571706467 32 22.050775124555866 29.498719704638837 23.011731078425534 25.438774092379763 33 20.99184183886143 28.288294725977092 23.81484348637329 26.905019948788183 34 19.544095754183292 27.094463963159253 25.588360229460687 27.773080053196768 35 20.599456122590762 26.02870243553862 24.900772147124794 28.471069294745828 36 22.332003414120962 28.85019551797376 24.899581174695808 23.91821989320947 37 18.919629210583775 31.77871732269398 25.6583894082852 23.643264058437047 38 18.760594692232875 31.43103277159134 24.1526826653963 25.65568987077949 39 20.37674427836996 26.899065086643244 25.802020683221183 26.922169951765618 40 21.76978502947657 23.129002163599914 26.065622580837257 29.035590226086267 41 18.53010182814268 25.050278886043785 24.631135989201848 31.788483296611687 42 20.57849500784057 26.581393040751106 24.958018221878163 27.882093729530162 43 21.173822426010837 27.57863395462395 25.942317235356 25.30522638400921 44 20.409773913733897 26.029655213481806 26.4160066694456 27.144564203338696 45 21.07306615851843 25.278866194247602 24.376664880208025 29.271402767025943 46 21.280454157486254 25.28585323249767 26.930824351416266 26.502868258599815 47 18.15073741042895 26.340022628476152 28.88949760813037 26.619742352964533 48 18.10413068937454 25.899442227912424 28.564520931340436 27.431906151372598 49 19.78967426904067 23.813334921296573 29.787570217749458 26.609420591913295 50 20.27948153000258 23.272554040373965 27.200539907501142 29.247424522122312 51 17.96462811885905 23.55934020127434 25.45425673395661 33.02177494591 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 445.0 1 723.0 2 1001.0 3 1653.0 4 2305.0 5 1758.0 6 1211.0 7 1319.5 8 1428.0 9 1670.5 10 1913.0 11 2149.0 12 2385.0 13 2294.5 14 2204.0 15 2188.0 16 2172.0 17 2397.0 18 2622.0 19 2446.5 20 2271.0 21 2692.0 22 3113.0 23 4486.5 24 5860.0 25 5701.0 26 7029.5 27 8517.0 28 9573.5 29 10630.0 30 12547.5 31 14465.0 32 18525.5 33 22586.0 34 24046.5 35 25507.0 36 28807.5 37 32108.0 38 35777.5 39 39447.0 40 47239.5 41 55032.0 42 66511.5 43 77991.0 44 86677.0 45 95363.0 46 111973.5 47 128584.0 48 146972.0 49 165360.0 50 155915.5 51 146471.0 52 123914.5 53 101358.0 54 86712.0 55 72066.0 56 64012.0 57 55958.0 58 50510.0 59 45062.0 60 41826.5 61 38591.0 62 33744.0 63 28897.0 64 26226.0 65 23555.0 66 18942.0 67 14329.0 68 11041.0 69 7753.0 70 7025.0 71 6297.0 72 5385.0 73 4473.0 74 3199.0 75 1532.0 76 1139.0 77 1052.0 78 965.0 79 570.0 80 175.0 81 256.5 82 338.0 83 197.5 84 57.0 85 29.0 86 1.0 87 1.0 88 1.0 89 1.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1259475.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.272521736078858 #Duplication Level Percentage of deduplicated Percentage of total 1 64.95694031454062 16.416256860084047 2 12.92688873588049 6.533901531148254 3 6.022299089039531 4.565960538867583 4 3.4621181222957347 3.4998582199436594 5 2.255973158208784 2.850706533842098 6 1.6145095580350943 2.4481636739129393 7 1.1944059708204784 2.112995560148404 8 0.9227506967871439 1.8656189633228004 9 0.703105346526838 1.5992320637567492 >10 4.495718667869192 23.518689807324613 >50 1.2249402591368441 21.647844768235124 >100 0.20749893816625098 8.260363536465665 >500 0.008776390131820128 1.4854364008828462 >1k 0.002820982542370755 1.0431008173435004 >5k 0.0012537700188314468 2.151870724721764 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 7806 0.6197820520454952 No Hit CTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGCT 7531 0.5979475575140436 No Hit TCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 6461 0.5129915242462136 No Hit GCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGC 5367 0.42612993509200264 No Hit TCCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTG 2513 0.19952758093650133 No Hit TTCCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCT 1545 0.1226701601857917 No Hit GCCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTG 1488 0.11814446495563627 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 1398 0.11099863038170667 No Hit CGCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTG 1389 0.1102840469243137 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCC 1318 0.10464677742710257 No Hit TGTCTCTTATACACATCTGACGCGAAACCCATCGTATGCCGTCTTCTGCTT 1272 0.1009944619782052 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.381944857976538E-4 0.0 0.0 0.6207348299886858 0.0 2 2.381944857976538E-4 0.0 0.0 2.2970682228706405 0.0 3 2.381944857976538E-4 0.0 0.0 3.1702892078048395 0.0 4 2.381944857976538E-4 0.0 0.0 4.156493777169058 0.0 5 2.381944857976538E-4 0.0 0.0 5.763671371007761 0.0 6 2.381944857976538E-4 0.0 0.0 6.860318783620159 0.0 7 2.381944857976538E-4 0.0 0.0 7.833740248913237 0.0 8 2.381944857976538E-4 0.0 0.0 9.33944699180214 0.0 9 2.381944857976538E-4 0.0 0.0 10.024494332956191 0.0 10 2.381944857976538E-4 0.0 0.0 11.354334147164494 0.0 11 2.381944857976538E-4 0.0 0.0 13.985033446475715 0.0 12 2.381944857976538E-4 0.0 0.0 16.350622283094147 0.0 13 2.381944857976538E-4 0.0 0.0 17.09609162547887 0.0 14 2.381944857976538E-4 0.0 0.0 17.363266440381906 0.0 15 2.381944857976538E-4 0.0 0.0 17.74183687647631 0.0 16 3.1759264773020503E-4 0.0 0.0 18.726691677087675 0.0 17 3.1759264773020503E-4 0.0 0.0 20.12290835467159 0.0 18 3.1759264773020503E-4 0.0 0.0 21.772484566982275 0.0 19 3.1759264773020503E-4 0.0 0.0 22.78878103971893 0.0 20 3.1759264773020503E-4 0.0 0.0 23.860973818456102 0.0 21 3.1759264773020503E-4 0.0 0.0 25.31014907004903 0.0 22 3.9699080966275633E-4 0.0 0.0 26.690486115246433 0.0 23 3.9699080966275633E-4 0.0 0.0 28.012941900395006 0.0 24 3.9699080966275633E-4 0.0 0.0 29.00430735028484 0.0 25 3.9699080966275633E-4 0.0 0.0 29.86720657416781 0.0 26 3.9699080966275633E-4 0.0 0.0 30.676512038746303 0.0 27 3.9699080966275633E-4 0.0 0.0 31.42611008555152 0.0 28 4.763889715953076E-4 0.0 0.0 32.2063558228627 0.0 29 4.763889715953076E-4 0.0 0.0 33.02796800254074 0.0 30 4.763889715953076E-4 0.0 0.0 33.98074594573136 0.0 31 4.763889715953076E-4 0.0 0.0 34.83173544532444 0.0 32 4.763889715953076E-4 0.0 0.0 35.638500168721094 0.0 33 4.763889715953076E-4 0.0 0.0 36.39063895670815 0.0 34 4.763889715953076E-4 0.0 0.0 37.17969788999385 0.0 35 4.763889715953076E-4 0.0 0.0 38.033942714226164 0.0 36 4.763889715953076E-4 0.0 0.0 38.86611484944124 0.0 37 4.763889715953076E-4 0.0 0.0 39.65644415331785 0.0 38 4.763889715953076E-4 0.0 0.0 40.44439151233649 0.0 39 5.557871335278589E-4 0.0 0.0 41.23059211179261 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTTACG 20 7.0335437E-4 45.0 1 AAATCGG 20 7.0335437E-4 45.0 10 CGAAAAT 25 3.89102E-5 45.0 22 ACGTTGA 20 7.0335437E-4 45.0 28 GCGGTAT 25 3.89102E-5 45.0 30 GCACGAC 95 0.0 45.0 16 TCGATTA 20 7.0335437E-4 45.0 45 TACGGCA 25 3.89102E-5 45.0 42 CGTTAGC 20 7.0335437E-4 45.0 25 CGTTAAC 20 7.0335437E-4 45.0 28 TATTCGA 20 7.0335437E-4 45.0 17 AACGCAC 20 7.0335437E-4 45.0 42 TCCGTTA 20 7.0335437E-4 45.0 23 CGCGTTG 25 3.89102E-5 45.0 14 TGTACGG 95 0.0 45.0 2 CCGTTAG 20 7.0335437E-4 45.0 24 AATCGAA 20 7.0335437E-4 45.0 34 GACTACG 20 7.0335437E-4 45.0 42 CCCGATA 20 7.0335437E-4 45.0 23 TAATCGG 20 7.0335437E-4 45.0 44 >>END_MODULE