##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935279.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2121121 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.339722722088936 33.0 31.0 34.0 30.0 34.0 2 32.48432173364933 34.0 31.0 34.0 31.0 34.0 3 32.53776092924449 34.0 31.0 34.0 31.0 34.0 4 35.992743459708336 37.0 35.0 37.0 35.0 37.0 5 31.915056236772912 37.0 35.0 37.0 0.0 37.0 6 33.555046128910135 37.0 35.0 37.0 17.0 37.0 7 35.30561151391175 37.0 35.0 37.0 32.0 37.0 8 35.8366255390428 37.0 35.0 37.0 35.0 37.0 9 37.884880211925676 39.0 38.0 39.0 35.0 39.0 10 37.54817381940964 39.0 37.0 39.0 35.0 39.0 11 37.413446474764996 39.0 37.0 39.0 35.0 39.0 12 37.232695824519205 39.0 37.0 39.0 34.0 39.0 13 37.19512323907971 39.0 37.0 39.0 34.0 39.0 14 38.37523271892551 40.0 38.0 41.0 34.0 41.0 15 38.45945657979908 40.0 38.0 41.0 34.0 41.0 16 38.514882460736565 40.0 38.0 41.0 34.0 41.0 17 38.515208231873615 40.0 38.0 41.0 34.0 41.0 18 38.485648862087544 40.0 38.0 41.0 34.0 41.0 19 38.52368063868115 40.0 38.0 41.0 34.0 41.0 20 38.46641516443428 40.0 38.0 41.0 34.0 41.0 21 38.40664158244626 40.0 37.0 41.0 34.0 41.0 22 38.38920787640121 40.0 37.0 41.0 34.0 41.0 23 38.332533127530205 40.0 37.0 41.0 34.0 41.0 24 38.323828296452675 40.0 37.0 41.0 34.0 41.0 25 38.23837112545677 40.0 37.0 41.0 34.0 41.0 26 38.20750537098072 40.0 37.0 41.0 34.0 41.0 27 38.170442893168286 40.0 37.0 41.0 34.0 41.0 28 38.152286456076766 40.0 37.0 41.0 34.0 41.0 29 38.11340277145906 40.0 37.0 41.0 34.0 41.0 30 38.05355375765927 40.0 37.0 41.0 34.0 41.0 31 37.84171482909273 40.0 36.0 41.0 33.0 41.0 32 37.879994116318684 40.0 36.0 41.0 34.0 41.0 33 37.88131417302455 40.0 36.0 41.0 34.0 41.0 34 37.83018931970406 40.0 36.0 41.0 33.0 41.0 35 37.78135995070531 40.0 36.0 41.0 33.0 41.0 36 37.79235602306516 40.0 36.0 41.0 33.0 41.0 37 37.76249445458321 40.0 36.0 41.0 33.0 41.0 38 37.76427275954554 40.0 36.0 41.0 33.0 41.0 39 37.72456686817961 40.0 36.0 41.0 33.0 41.0 40 37.654081026023505 40.0 36.0 41.0 33.0 41.0 41 37.59472797638607 40.0 36.0 41.0 33.0 41.0 42 37.60100248877834 40.0 36.0 41.0 33.0 41.0 43 37.59028598557084 40.0 36.0 41.0 33.0 41.0 44 37.567276454289974 40.0 36.0 41.0 33.0 41.0 45 37.55309433078075 40.0 35.0 41.0 33.0 41.0 46 37.45705030500382 39.0 35.0 41.0 33.0 41.0 47 37.40589197881686 39.0 35.0 41.0 33.0 41.0 48 37.38017774563544 39.0 35.0 41.0 33.0 41.0 49 37.375044610844924 39.0 35.0 41.0 33.0 41.0 50 37.304198110338824 39.0 35.0 41.0 33.0 41.0 51 36.67123044842798 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 12.0 10 11.0 11 21.0 12 22.0 13 18.0 14 27.0 15 60.0 16 77.0 17 126.0 18 183.0 19 347.0 20 591.0 21 1012.0 22 1649.0 23 2734.0 24 4116.0 25 6026.0 26 8583.0 27 10762.0 28 14048.0 29 18053.0 30 24489.0 31 33139.0 32 45699.0 33 70011.0 34 119243.0 35 165551.0 36 166747.0 37 269434.0 38 456560.0 39 701116.0 40 652.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 23.336999633684265 4.527841645997564 56.59596977258723 15.539188947730938 2 18.80981801603963 4.426763018234226 54.413444588969696 22.34997437675644 3 20.270932209902217 4.423462876469565 52.7810530375212 22.524551876107022 4 19.009382303036933 4.580408189820383 51.14800145771976 25.262208049422924 5 16.221611119780533 16.263711499721136 45.49410429673743 22.020573083760898 6 21.119870106420144 6.678025440321416 53.65563775003878 18.546466703219664 7 83.64930619233886 2.230660108499232 9.145635727523324 4.974397971638582 8 85.75460805866332 2.4720890510253777 6.839260937966292 4.93404195234501 9 80.79661650608334 4.955728598227069 8.84263556864507 5.405019327044521 10 39.053500483942216 28.80811608578671 17.39089849188236 14.74748493838871 11 27.57263729886225 25.539797116713288 25.915211814884675 20.972353769539787 12 24.129175091850016 22.477029834695898 31.489056965632795 21.904738107821288 13 23.055167526982196 24.588460535726156 33.0263572893767 19.330014647914947 14 20.373425184136124 26.836564250695737 31.477223600162368 21.312786965005767 15 18.873086448156425 25.5656796571247 34.67958687882493 20.881647015893954 16 20.640925246603093 25.647617462653006 31.15734557340199 22.554111717341915 17 20.84657122342384 25.20360696065901 29.20304876525196 24.74677305066519 18 21.21430130577181 24.731498108783047 31.367988907752082 22.68621167769307 19 22.652550231693525 26.59852973969896 29.738426049244715 21.0104939793628 20 23.940831286852564 27.392072399452932 29.63598021989316 19.03111609380134 21 23.78888333103109 26.820110686754788 29.394315552955252 19.99669042925887 22 21.806865332057907 25.406707113832734 29.099188589429836 23.687238964679523 23 20.84199816983567 26.632568344757324 28.54910210214316 23.976331383263847 24 21.793287605940446 24.853414774546103 29.60604321959945 23.74725439991401 25 20.85354866601198 26.44483742323045 27.909204613975348 24.79240929678222 26 19.300077647621233 27.396504018394047 28.476310403791206 24.827107930193513 27 19.88849292426033 26.20779295476307 30.82945291664172 23.074261204334878 28 17.920712679757543 25.0754200255431 32.97831665425971 24.025550640439654 29 20.593497494956676 23.432656599977086 30.937650421640257 25.03619548342598 30 22.68970039898714 24.443160008316358 30.682125159290774 22.18501443340573 31 22.15290876852381 26.639262918051347 28.7310342031407 22.47679411028414 32 22.182044305817534 26.671651452227387 27.066678421457336 24.079625820497746 33 22.24026823552263 25.987013470707232 27.852395030740823 23.920323263029314 34 20.071603647316678 24.454191910786797 29.931625777124456 25.54257866477207 35 19.51958421985356 23.89736370532374 29.13723450948814 27.445817565334558 36 20.983338527127874 25.896872455649632 29.41076911689621 23.70901990032629 37 19.87779103596636 26.294350958761896 32.55886863597126 21.268989369300478 38 21.917278646527002 26.434842708171765 28.67149021672974 22.976388428571497 39 23.647071524915365 25.116766087366067 28.624156754848023 22.612005632870545 40 22.734582326986533 23.36208071109569 29.93992327641846 23.96341368549932 41 18.41488533657439 25.382993238009526 28.55895538255479 27.6431660428613 42 19.010938084154557 25.936521301707916 28.026076777326708 27.026463836810816 43 20.496661906605045 24.83092666566405 29.51114057142426 25.16127085630664 44 20.95151573154007 23.61963320338632 29.162268442017215 26.266582623056394 45 22.716997285869123 22.27199674134573 27.76871286456548 27.242293108219663 46 22.313672817345168 22.958143359101154 29.956329695477063 24.77185412807662 47 19.034180511154243 23.80689267608967 32.09123854791876 25.06768826483732 48 19.231906147739803 23.097880790393383 32.32630293132735 25.343910130539467 49 22.072479599230785 21.600606471766582 32.273736387504535 24.053177541498105 50 22.205145298170166 21.49665200617975 30.104553205592705 26.193649490057382 51 20.217564203079412 21.11878577412604 28.679174832553162 29.98447519024139 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 404.0 1 1003.0 2 1602.0 3 2440.5 4 3279.0 5 2531.5 6 1784.0 7 1915.5 8 2047.0 9 2435.0 10 2823.0 11 2949.5 12 3076.0 13 3327.0 14 3578.0 15 3626.0 16 3674.0 17 3528.5 18 3383.0 19 4138.0 20 4893.0 21 5415.0 22 5937.0 23 7318.5 24 8700.0 25 10160.5 26 15406.5 27 19192.0 28 22935.0 29 26678.0 30 30540.0 31 34402.0 32 39281.0 33 44160.0 34 50534.0 35 56908.0 36 63462.5 37 70017.0 38 78255.5 39 86494.0 40 96556.0 41 106618.0 42 122155.5 43 137693.0 44 151508.5 45 165324.0 46 192432.5 47 219541.0 48 240035.0 49 260529.0 50 246240.0 51 231951.0 52 198182.5 53 164414.0 54 141063.0 55 117712.0 56 100898.5 57 84085.0 58 77198.0 59 70311.0 60 63367.5 61 56424.0 62 48171.5 63 39919.0 64 34057.5 65 28196.0 66 22586.0 67 16976.0 68 13667.5 69 10359.0 70 8559.0 71 6759.0 72 5443.5 73 4128.0 74 3393.5 75 1947.0 76 1235.0 77 1158.5 78 1082.0 79 709.5 80 337.0 81 251.5 82 166.0 83 98.5 84 31.0 85 21.0 86 11.0 87 8.5 88 6.0 89 3.5 90 1.0 91 1.0 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 2121121.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.885585666890826 #Duplication Level Percentage of deduplicated Percentage of total 1 64.25878895534186 15.991175973988181 2 13.892308599663886 6.914364715356395 3 6.3615609517298655 4.749335101182633 4 3.5314779052175846 3.5153158376409746 5 2.1974472520485393 2.7342380919663887 6 1.4372377310650104 2.145990160806367 7 0.982251485175884 1.7110732436542642 8 0.73363696657995 1.4605588464178614 9 0.542671795223232 1.2154234904129857 >10 4.574809104437818 26.278390979264117 >50 1.3070676301470208 22.292751827330058 >100 0.1691269451749385 6.783443820335452 >500 0.0075393525121355935 1.260814482907653 >1k 0.0032602605457883642 1.2812499814843819 >5k 8.150651364470911E-4 1.6658734472523418 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGCT 9179 0.4327428751117923 No Hit CCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 9069 0.4275569380530389 No Hit TCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 8043 0.3791862887595757 No Hit GCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTGC 6561 0.3093175731134622 No Hit TCCTGTCTCTTATACACATCTGACGCCTTGGTCATCGTATGCCGTCTTCTG 3312 0.15614385035082864 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4143464705691E-4 0.0 0.0 0.44575486264102804 0.0 2 1.4143464705691E-4 0.0 0.0 1.6264512962721127 0.0 3 1.4143464705691E-4 0.0 0.0 2.3043947044982347 0.0 4 1.4143464705691E-4 0.0 0.0 3.054186913429267 0.0 5 1.4143464705691E-4 0.0 0.0 4.330587458235527 0.0 6 1.4143464705691E-4 0.0 0.0 5.141950883518668 0.0 7 1.4143464705691E-4 0.0 0.0 5.892261686155575 0.0 8 1.4143464705691E-4 0.0 0.0 7.10610097208033 0.0 9 1.8857952940921332E-4 0.0 0.0 7.606449608485325 0.0 10 1.8857952940921332E-4 0.0 0.0 8.705726830293981 0.0 11 2.3572441176151668E-4 0.0 0.0 10.982211764439652 0.0 12 2.3572441176151668E-4 0.0 0.0 13.113820475116695 0.0 13 2.3572441176151668E-4 0.0 0.0 13.757489553872693 0.0 14 2.3572441176151668E-4 0.0 0.0 13.954366582575911 0.0 15 2.3572441176151668E-4 0.0 0.0 14.246287694101374 0.0 16 2.3572441176151668E-4 0.0 0.0 15.006074618091095 0.0 17 2.8286929411382E-4 0.0 0.0 16.22241258278052 0.0 18 2.8286929411382E-4 0.0 0.0 17.5299287499393 0.0 19 2.8286929411382E-4 0.0 0.0 18.477823754514713 0.0 20 2.8286929411382E-4 0.0 0.0 19.38795570832593 0.0 21 3.3001417646612335E-4 0.0 0.0 20.725880324601945 0.0 22 3.3001417646612335E-4 0.0 0.0 22.138199565229893 0.0 23 3.3001417646612335E-4 0.0 0.0 23.476972789388252 0.0 24 3.3001417646612335E-4 0.0 0.0 24.483091723668757 0.0 25 3.3001417646612335E-4 0.0 0.0 25.391337882185884 0.0 26 3.3001417646612335E-4 0.0 0.0 26.178563127704642 0.0 27 3.7715905881842665E-4 0.0 0.0 26.94810904234129 0.0 28 3.7715905881842665E-4 0.0 0.0 27.781300548153546 0.0 29 3.7715905881842665E-4 0.0 0.0 28.6573938969064 0.0 30 3.7715905881842665E-4 0.0 0.0 29.598028589599558 0.0 31 3.7715905881842665E-4 0.0 0.0 30.463797209117253 0.0 32 4.2430394117073E-4 0.0 0.0 31.29001127234137 4.714488235230333E-5 33 4.7144882352303337E-4 0.0 0.0 32.115565307212556 9.428976470460666E-5 34 4.7144882352303337E-4 0.0 0.0 32.915095367025266 9.428976470460666E-5 35 5.185937058753367E-4 0.0 0.0 33.768323447837254 9.428976470460666E-5 36 5.185937058753367E-4 0.0 0.0 34.56478909029706 9.428976470460666E-5 37 5.185937058753367E-4 0.0 0.0 35.32443457963973 9.428976470460666E-5 38 5.185937058753367E-4 0.0 0.0 36.11495996692315 9.428976470460666E-5 39 5.185937058753367E-4 0.0 0.0 36.921656048853414 9.428976470460666E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGCGA 25 3.891925E-5 45.0 30 TAGCGAT 25 3.891925E-5 45.0 24 CACGCGT 25 3.891925E-5 45.0 16 CGCGACA 20 7.0346385E-4 45.0 29 CCGTCGT 25 3.891925E-5 45.0 34 CGGATCG 25 3.891925E-5 45.0 12 AACGCAC 25 3.891925E-5 45.0 23 TATCGGC 20 7.0346385E-4 45.0 24 ACGCGTG 25 3.891925E-5 45.0 17 TACGGGA 905 0.0 42.26519 4 GCGATAG 80 0.0 42.1875 9 TGCGACG 70 0.0 41.785713 1 CGAACGA 60 3.6379788E-12 41.249996 22 TCTACGG 475 0.0 41.210526 2 TTACGGG 1305 0.0 41.206894 3 CGTATGG 270 0.0 40.833332 2 TTCGTAC 45 1.929584E-8 40.0 33 TCTTGCG 790 0.0 39.873417 1 TTATGGG 4625 0.0 39.794594 3 GCACGGG 345 0.0 39.782608 3 >>END_MODULE