##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935275.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1297000 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32767694680031 33.0 31.0 34.0 30.0 34.0 2 32.47580107941403 34.0 31.0 34.0 30.0 34.0 3 32.53764687740941 34.0 31.0 34.0 30.0 34.0 4 35.9814633770239 37.0 35.0 37.0 35.0 37.0 5 31.739302235929067 37.0 35.0 37.0 0.0 37.0 6 33.398531225905934 37.0 35.0 37.0 17.0 37.0 7 35.22678720123361 37.0 35.0 37.0 32.0 37.0 8 35.73999460292984 37.0 35.0 37.0 35.0 37.0 9 37.803257517347724 39.0 38.0 39.0 35.0 39.0 10 37.546866615266 39.0 37.0 39.0 35.0 39.0 11 37.44005859676176 39.0 37.0 39.0 35.0 39.0 12 37.16833616037008 39.0 37.0 39.0 34.0 39.0 13 37.058104086353126 39.0 37.0 39.0 33.0 39.0 14 38.235141865844255 40.0 37.0 41.0 33.0 41.0 15 38.33063454124903 40.0 37.0 41.0 34.0 41.0 16 38.44212027756361 40.0 37.0 41.0 34.0 41.0 17 38.435915959907476 40.0 37.0 41.0 34.0 41.0 18 38.40839784117193 40.0 37.0 41.0 34.0 41.0 19 38.415555127216656 40.0 37.0 41.0 34.0 41.0 20 38.311707016191214 40.0 37.0 41.0 34.0 41.0 21 38.27857054741712 40.0 37.0 41.0 34.0 41.0 22 38.226372397841175 40.0 37.0 41.0 34.0 41.0 23 38.15337856592136 40.0 37.0 41.0 34.0 41.0 24 38.14094834232845 40.0 37.0 41.0 34.0 41.0 25 38.045124903623744 40.0 36.0 41.0 34.0 41.0 26 37.99973168851195 40.0 36.0 41.0 34.0 41.0 27 37.918879722436394 40.0 36.0 41.0 34.0 41.0 28 37.88412104857363 40.0 36.0 41.0 34.0 41.0 29 37.86143793369314 40.0 36.0 41.0 34.0 41.0 30 37.8118966846569 40.0 36.0 41.0 33.0 41.0 31 37.63216345412491 40.0 36.0 41.0 33.0 41.0 32 37.62830840400925 40.0 36.0 41.0 33.0 41.0 33 37.56519352351581 40.0 35.0 41.0 33.0 41.0 34 37.544257517347724 40.0 35.0 41.0 33.0 41.0 35 37.46913030069391 40.0 35.0 41.0 33.0 41.0 36 37.47686815728604 40.0 35.0 41.0 33.0 41.0 37 37.48384579799537 40.0 35.0 41.0 33.0 41.0 38 37.44602698535081 40.0 35.0 41.0 33.0 41.0 39 37.418098689282964 39.0 35.0 41.0 33.0 41.0 40 37.30833616037008 39.0 35.0 41.0 33.0 41.0 41 37.23054818812645 39.0 35.0 41.0 33.0 41.0 42 37.22619198149576 39.0 35.0 41.0 33.0 41.0 43 37.192336931380105 39.0 35.0 41.0 33.0 41.0 44 37.16801233616037 39.0 35.0 41.0 33.0 41.0 45 37.13667771781033 39.0 35.0 41.0 33.0 41.0 46 37.03989976869699 39.0 35.0 41.0 33.0 41.0 47 36.97919814957594 39.0 35.0 41.0 32.0 41.0 48 36.97006630686199 39.0 35.0 41.0 33.0 41.0 49 36.95384579799537 39.0 35.0 41.0 33.0 41.0 50 36.88375019275251 39.0 35.0 41.0 32.0 41.0 51 36.250084811102546 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 13.0 11 13.0 12 12.0 13 25.0 14 11.0 15 27.0 16 37.0 17 69.0 18 167.0 19 303.0 20 529.0 21 922.0 22 1600.0 23 2558.0 24 3629.0 25 4713.0 26 6329.0 27 7621.0 28 9574.0 29 12353.0 30 16351.0 31 21978.0 32 30631.0 33 46446.0 34 79440.0 35 117812.0 36 104948.0 37 165363.0 38 266623.0 39 396446.0 40 450.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 25.698920585967617 4.304703161141095 52.57733230531997 17.419043947571318 2 19.40362374710871 7.028296067848883 52.34009252120278 21.227987663839627 3 20.548882035466463 7.0863531225905945 49.730377794911334 22.634387047031613 4 19.005088666152663 4.539861218195837 51.58519660755589 24.869853508095606 5 17.47447956823439 16.943716268311487 42.79776407093292 22.784040092521202 6 21.2798766383963 8.594448727833463 51.870778720123354 18.254895913646877 7 82.01873554356207 2.566615265998458 10.544872783346184 4.869776407093292 8 83.01858134155744 4.832228218966846 6.759059367771782 5.390131071703933 9 78.43955281418658 5.220740169622205 8.530840400925213 7.808866615265998 10 41.65566692367001 27.620200462606014 15.75805705474171 14.966075558982267 11 31.929915188897457 24.08542791056284 24.12112567463377 19.863531225905938 12 28.187047031611414 21.52220508866615 29.542713955281418 20.748033924441017 13 24.557363145720895 24.490593677717808 30.692058596761758 20.259984579799536 14 19.986892829606784 28.593986121819583 28.978797224363916 22.440323824209717 15 17.50794140323824 24.649653045489593 36.19059367771781 21.651811873554355 16 19.321202775636085 23.748882035466462 32.73685427910563 24.19306090979183 17 20.42706245181187 23.394217424826522 29.461680801850427 26.717039321511184 18 20.74656900539707 24.08982266769468 30.468234387047033 24.695373939861216 19 23.098072474942175 25.368234387047035 29.05165767154973 22.482035466461063 20 26.599614494988433 25.059290670778722 28.863299922899 19.47779491133385 21 25.126291441788744 26.492289899768696 27.378797224363915 21.002621434078645 22 22.88010794140324 24.07509637625289 27.610485736314573 25.4343099460293 23 21.377101002313033 26.254433307633 27.145643793369313 25.222821896684657 24 22.073554356206632 23.478180416345413 29.99814957594449 24.45011565150347 25 20.663222821896685 26.212952968388585 27.89691595990748 25.226908249807245 26 20.444333076329993 26.97270624518119 27.654973014649194 24.92798766383963 27 21.2727833461835 27.0555898226677 27.250192752505782 24.421434078643024 28 18.446954510408638 25.914109483423285 30.947031611410946 24.691904394757135 29 19.96515034695451 23.31202775636083 29.13893600616808 27.583885890516573 30 20.62359290670779 26.313415574402466 27.90107941403238 25.161912104857365 31 22.68141865844256 25.224286815728604 27.32636854279106 24.76792598303778 32 24.317347725520435 26.296299151888974 24.84579799537394 24.540555127216653 33 21.983346183500384 26.97224363916731 25.785119506553585 25.25929067077872 34 20.79244410177332 25.048727833461836 28.374016962220512 25.78481110254433 35 21.075404780262144 23.847802621434077 27.040400925212026 28.03639167309175 36 21.526676946800308 27.121202775636082 26.102004626060136 25.250115651503467 37 20.155435620663066 26.323361603700846 29.01557440246723 24.50562837316885 38 20.5017733230532 26.967077872012336 27.155050115651502 25.376098689282962 39 20.74965304548959 26.585890516576715 27.6159599074788 25.048496530454894 40 22.019737856592137 25.01703932151118 29.245104086353123 23.718118735543563 41 20.059984579799536 25.306553585196607 28.624826522744794 26.00863531225906 42 22.45728604471858 24.439244410177334 27.046183500385506 26.05728604471858 43 21.485042405551273 25.642713955281422 26.419198149575944 26.453045489591364 44 20.162220508866614 23.763916730917504 29.031380107941402 27.04248265227448 45 20.524595219737858 23.186430223592907 27.0686198920586 29.220354664610642 46 21.893369313801077 24.87756360832691 27.96206630686199 25.26700077101002 47 18.85412490362375 24.957286044718582 31.195605242868158 24.992983808789514 48 20.135543562066307 23.486353122590593 29.52513492675405 26.852968388589048 49 20.672552043176562 22.77124132613724 31.401619121048576 25.154587509637626 50 20.68619892058597 23.357594448727834 28.762683114880495 27.19352351580571 51 19.141711642251348 23.70794140323824 27.108558211256746 30.04178874325366 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 275.0 1 712.0 2 1149.0 3 1762.5 4 2376.0 5 1786.5 6 1197.0 7 1222.0 8 1247.0 9 1339.0 10 1431.0 11 1550.0 12 1669.0 13 1542.0 14 1415.0 15 1752.0 16 2089.0 17 2068.5 18 2048.0 19 2405.0 20 2762.0 21 3200.5 22 3639.0 23 4345.0 24 5051.0 25 5551.0 26 7896.5 27 9742.0 28 12674.0 29 15606.0 30 18467.5 31 21329.0 32 24077.5 33 26826.0 34 30188.5 35 33551.0 36 35372.0 37 37193.0 38 41801.5 39 46410.0 40 54162.5 41 61915.0 42 68456.0 43 74997.0 44 86044.5 45 97092.0 46 116346.0 47 135600.0 48 137860.5 49 140121.0 50 132046.0 51 123971.0 52 106807.5 53 89644.0 54 80323.5 55 71003.0 56 66622.0 57 62241.0 58 58659.0 59 55077.0 60 51291.0 61 47505.0 62 42699.0 63 37893.0 64 32256.0 65 26619.0 66 22344.5 67 18070.0 68 14379.5 69 10689.0 70 9125.5 71 7562.0 72 6663.5 73 5765.0 74 4953.5 75 3133.5 76 2125.0 77 1518.5 78 912.0 79 752.5 80 593.0 81 363.5 82 134.0 83 163.0 84 192.0 85 132.5 86 73.0 87 39.0 88 5.0 89 3.5 90 2.0 91 1.5 92 1.0 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1297000.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 23.707637399752585 #Duplication Level Percentage of deduplicated Percentage of total 1 67.64639706672244 16.03736253057543 2 12.312649157606916 5.838076433178277 3 5.389343219028877 3.8330578457865596 4 2.966874131807485 2.813503045103905 5 1.8838609962323893 2.2330946705107078 6 1.312022617140422 1.8662973880463722 7 0.9771023572716111 1.6215351872047201 8 0.7243609049759405 1.3738308545380988 9 0.6039609472491307 1.2886638426894141 >10 4.287865175906122 21.82155049379737 >50 1.573004935600499 26.677041698552628 >100 0.31212181533745925 10.33093018387591 >500 0.005870629755398457 0.9864681332469445 >1k 0.003913753170265638 2.382740397722044 >5k 6.52292195044273E-4 0.8958472951715862 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGC 6217 0.4793369313801079 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCG 5369 0.4139552814186585 No Hit GAATCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTC 4788 0.36915959907478796 No Hit CCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCTGC 4615 0.35582112567463375 No Hit GCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCTGC 4355 0.33577486507324594 No Hit TCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCTGC 3945 0.3041634541249036 No Hit CTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCTGCT 3748 0.2889745566692367 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCCTCATGAT 1774 0.13677717810331533 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 1640 0.1264456437933693 No Hit TCCTGTCTCTTATACACATCTGACGCCCTCATGATCGTATGCCGTCTTCTG 1517 0.11696222050886662 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5420200462606013E-4 0.0 0.0 0.29876638396299154 0.0 2 1.5420200462606013E-4 0.0 0.0 1.3582883577486506 0.0 3 1.5420200462606013E-4 0.0 0.0 1.8841942945258288 0.0 4 1.5420200462606013E-4 0.0 0.0 2.5655358519660756 0.0 5 1.5420200462606013E-4 0.0 0.0 3.9565921356977642 0.0 6 1.5420200462606013E-4 0.0 0.0 4.670316114109483 0.0 7 1.5420200462606013E-4 0.0 0.0 5.423207401696222 0.0 8 1.5420200462606013E-4 0.0 0.0 6.548882035466461 0.0 9 1.5420200462606013E-4 0.0 0.0 7.045335389360062 0.0 10 1.5420200462606013E-4 0.0 0.0 8.44402467232074 0.0 11 1.5420200462606013E-4 0.0 0.0 10.195836545875096 0.0 12 1.5420200462606013E-4 0.0 0.0 12.373939861218195 0.0 13 1.5420200462606013E-4 0.0 0.0 12.88496530454896 0.0 14 1.5420200462606013E-4 0.0 0.0 13.066229760986893 0.0 15 1.5420200462606013E-4 0.0 0.0 13.40763299922899 0.0 16 1.5420200462606013E-4 0.0 0.0 14.056283731688511 0.0 17 1.5420200462606013E-4 0.0 0.0 14.99414032382421 0.0 18 1.5420200462606013E-4 0.0 0.0 16.006707787201233 0.0 19 1.5420200462606013E-4 0.0 0.0 16.830609097918273 0.0 20 1.5420200462606013E-4 0.0 0.0 17.524286815728605 0.0 21 1.5420200462606013E-4 0.0 0.0 18.49992289899769 0.0 22 1.5420200462606013E-4 0.0 0.0 19.512336160370086 0.0 23 1.5420200462606013E-4 0.0 0.0 20.46538164996145 0.0 24 1.5420200462606013E-4 0.0 0.0 21.25520431765613 0.0 25 1.5420200462606013E-4 0.0 0.0 21.924672320740168 0.0 26 1.5420200462606013E-4 0.0 0.0 22.48550501156515 0.0 27 1.5420200462606013E-4 0.0 0.0 23.026676946800308 0.0 28 1.5420200462606013E-4 0.0 0.0 23.58218966846569 0.0 29 1.5420200462606013E-4 0.0 0.0 24.231457208943716 0.0 30 1.5420200462606013E-4 0.0 0.0 24.93816499614495 0.0 31 1.5420200462606013E-4 0.0 0.0 25.6035466461064 0.0 32 2.313030069390902E-4 0.0 0.0 26.194294525828838 0.0 33 2.313030069390902E-4 0.0 0.0 26.785813415574403 0.0 34 2.313030069390902E-4 0.0 0.0 27.365304548959138 0.0 35 2.313030069390902E-4 0.0 0.0 28.025828835774867 0.0 36 2.313030069390902E-4 0.0 0.0 28.64710871241326 0.0 37 3.0840400925212025E-4 0.0 0.0 29.243793369313803 0.0 38 3.0840400925212025E-4 0.0 0.0 29.85898226676947 0.0 39 3.0840400925212025E-4 0.0 0.0 30.501079414032382 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATCACG 30 2.165718E-6 45.000004 1 GTCGCTA 20 7.0336217E-4 45.000004 37 GTAATCG 20 7.0336217E-4 45.000004 30 CCCGTAT 20 7.0336217E-4 45.000004 22 CCCCGTA 20 7.0336217E-4 45.000004 21 CGCTATA 20 7.0336217E-4 45.000004 10 ACTCGTT 20 7.0336217E-4 45.000004 30 CGTCGTA 20 7.0336217E-4 45.000004 26 AATTACG 20 7.0336217E-4 45.000004 33 CGTAAGT 20 7.0336217E-4 45.000004 44 CTCGACA 20 7.0336217E-4 45.000004 31 CGTCCGA 20 7.0336217E-4 45.000004 35 GCTCGAT 20 7.0336217E-4 45.000004 28 CAATCGA 20 7.0336217E-4 45.000004 26 CGATCGA 60 0.0 45.000004 41 CGTCAGT 30 2.165718E-6 45.000004 19 TATCGAG 20 7.0336217E-4 45.000004 32 GTGCGAC 20 7.0336217E-4 45.000004 11 CGCCAAT 30 2.165718E-6 45.000004 20 GCGAGTA 20 7.0336217E-4 45.000004 39 >>END_MODULE