##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2935272.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 442564 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.15194412559539 33.0 31.0 34.0 30.0 34.0 2 32.30843448631158 34.0 31.0 34.0 30.0 34.0 3 32.36024168255891 34.0 31.0 34.0 30.0 34.0 4 35.88126237109209 37.0 35.0 37.0 35.0 37.0 5 32.255316745148725 37.0 35.0 37.0 0.0 37.0 6 33.69185247783371 37.0 35.0 37.0 17.0 37.0 7 35.26476170678139 37.0 35.0 37.0 32.0 37.0 8 35.742050867219206 37.0 35.0 37.0 35.0 37.0 9 37.745896638678246 39.0 37.0 39.0 35.0 39.0 10 37.47548829095905 39.0 37.0 39.0 35.0 39.0 11 37.36627696785098 39.0 37.0 39.0 35.0 39.0 12 37.087772615938036 39.0 35.0 39.0 34.0 39.0 13 36.89100559467105 39.0 35.0 39.0 33.0 39.0 14 37.92741162860061 40.0 36.0 41.0 33.0 41.0 15 38.04772417096736 40.0 36.0 41.0 33.0 41.0 16 38.17152321472149 40.0 37.0 41.0 34.0 41.0 17 38.19890456521543 40.0 37.0 41.0 34.0 41.0 18 38.21539483554921 40.0 37.0 41.0 34.0 41.0 19 38.24045109859817 40.0 37.0 41.0 34.0 41.0 20 38.13819470178324 40.0 36.0 41.0 34.0 41.0 21 38.06404271472601 40.0 36.0 41.0 34.0 41.0 22 38.02528899774948 40.0 36.0 41.0 34.0 41.0 23 38.019506783199716 40.0 36.0 41.0 34.0 41.0 24 37.99528203830406 40.0 36.0 41.0 34.0 41.0 25 37.90737384875408 40.0 36.0 41.0 34.0 41.0 26 37.79511663849748 39.0 36.0 41.0 34.0 41.0 27 37.65994748782097 39.0 35.0 41.0 33.0 41.0 28 37.66896991169639 39.0 36.0 41.0 33.0 41.0 29 37.653417358845275 39.0 36.0 41.0 33.0 41.0 30 37.662627326217226 39.0 36.0 41.0 33.0 41.0 31 37.44629477318535 39.0 35.0 41.0 33.0 41.0 32 37.43694245352085 39.0 35.0 41.0 33.0 41.0 33 37.405333465894195 39.0 35.0 41.0 33.0 41.0 34 37.33032284596126 39.0 35.0 41.0 33.0 41.0 35 37.27046483672418 39.0 35.0 41.0 33.0 41.0 36 37.19798492421435 39.0 35.0 41.0 32.0 41.0 37 37.10311502969062 39.0 35.0 41.0 32.0 41.0 38 37.188225883714 39.0 35.0 41.0 32.0 41.0 39 37.29753888703103 39.0 35.0 41.0 33.0 41.0 40 37.22434043437785 39.0 35.0 41.0 33.0 41.0 41 37.181178315452684 39.0 35.0 41.0 32.0 41.0 42 37.136133982881574 39.0 35.0 41.0 32.0 41.0 43 36.97439918294303 39.0 35.0 40.0 32.0 41.0 44 36.88358971809727 39.0 35.0 40.0 32.0 41.0 45 36.95758805506096 39.0 35.0 40.0 32.0 41.0 46 36.8976803354995 39.0 35.0 40.0 32.0 41.0 47 36.84856201588923 39.0 35.0 40.0 32.0 41.0 48 36.87040518433492 39.0 35.0 40.0 32.0 41.0 49 36.89414412378775 39.0 35.0 40.0 32.0 41.0 50 36.78185753924856 39.0 35.0 40.0 32.0 41.0 51 36.17966215055902 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 5.0 11 2.0 12 4.0 13 6.0 14 9.0 15 12.0 16 20.0 17 22.0 18 42.0 19 78.0 20 139.0 21 263.0 22 367.0 23 611.0 24 924.0 25 1367.0 26 2028.0 27 2533.0 28 3362.0 29 4412.0 30 6008.0 31 8185.0 32 11413.0 33 17714.0 34 29425.0 35 46138.0 36 37613.0 37 58034.0 38 95880.0 39 115852.0 40 93.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 24.02386999394438 4.97939281098327 52.34994260717094 18.64679458790141 2 19.85226995417612 5.9623014976365 51.73602010104753 22.44940844713985 3 17.78183494364657 5.649126454026988 54.08189549985991 22.487143102466536 4 18.593920879240063 4.246843394401713 52.939009951103124 24.220225775255106 5 15.65558879619671 14.943149465388055 46.71595520647861 22.685306531936625 6 19.46950045643116 6.634294700879422 53.5716868068799 20.32451803580951 7 77.75688939904737 2.081280899485724 13.63486411004962 6.526965591417287 8 78.38934029880424 3.268001916107049 10.050749722074096 8.291908063014615 9 72.92256035285291 5.464746341772037 13.189956706826583 8.422736598548457 10 37.333809347348634 25.83016241718712 19.729123923319566 17.10690431214468 11 28.6261422076807 26.153279525673124 26.13384730795998 19.0867309586862 12 27.37344203324265 20.65712529713217 31.838558942887357 20.13087372673783 13 23.105810685008272 27.388129174537468 31.044323532867562 18.461736607586698 14 17.19028208349527 32.428756066919135 29.621252519409623 20.759709330175973 15 13.366428358384324 26.39121121464918 39.881237515929904 20.361122911036595 16 14.966196979419927 24.72094431539845 35.80363518044848 24.509223524733144 17 15.806301461483537 24.092786580020064 29.343552570927596 30.757359387568805 18 17.620050433383646 22.98740973057004 33.98649686824957 25.40604296779675 19 20.63791903543894 24.67394546325503 31.677000388644355 23.01113511266167 20 23.68154662376515 25.47360381775291 31.69711047441726 19.14773908406468 21 21.527507885865095 28.17897524425846 29.440939615513233 20.85257725436321 22 17.474760712574906 26.076680434920146 28.390018166864 28.05854068564095 23 17.91718259957882 28.14643757738994 26.79680227040609 27.139577552625155 24 20.755416165797488 24.460417024430363 30.052602561437443 24.731564248334703 25 16.929980748547102 27.67757883605535 27.588326208186835 27.804114207210706 26 15.821440514818196 32.87773067850074 27.87687204562504 23.42395676105603 27 16.94602362596144 33.73568568613805 27.62108983107528 21.697200856825226 28 13.597355410742853 30.615684963078788 33.57322330781536 22.213736318362994 29 15.516851799965655 28.578013575437677 32.7347005178912 23.17043410670547 30 20.737339684203867 30.06051102213465 27.58290326370875 21.61924602995273 31 21.880451188980576 31.012011822018966 23.320242947912618 23.787294041087844 32 23.804466698601782 30.206026698963313 23.958342748167496 22.031163854267405 33 25.301425330573657 28.086559232111064 23.348713406422576 23.263302030892707 34 19.90039858641914 27.095742084760623 26.299247114541625 26.70461221427861 35 20.358185482777632 27.341808190453808 26.360707151959943 25.939299174808617 36 24.766361475402427 30.06480418651314 25.04044612756573 20.128388210518704 37 19.286024168255892 32.125297132166196 28.90000090382408 19.688677795753833 38 21.04328413517593 30.285789173995177 26.384658490071494 22.286268200757405 39 24.732694028434306 23.125468858741336 29.463987129545107 22.677849983279255 40 26.974403702063434 22.36354515957014 26.246599361900202 24.41545177646623 41 21.162137001653996 26.359577371860343 22.919171012554116 29.55911461393154 42 26.076906390940067 25.884391861967988 24.010312632749162 24.028389114342787 43 25.669507687023795 25.71808823130666 25.881906345748863 22.73049773592068 44 20.193237588235828 26.738505617266657 27.599398053162933 25.46885874133459 45 20.549118319610272 25.43699894252583 25.829484549127358 28.18439818873654 46 24.387207273976195 25.32876600898401 27.746043510091194 22.5379832069486 47 19.273822543180195 26.01567230954167 30.604839074122616 24.105666073155522 48 21.50016720745474 23.827740168653573 29.935105431078895 24.73698719281279 49 23.639970716099818 19.974512160952994 32.81062174058441 23.574895382362776 50 22.53075261431115 20.711354741913034 29.116918682947553 27.640973960828262 51 20.592275919415044 20.929176345116186 25.374861037047747 33.10368669842102 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 170.0 1 260.0 2 350.0 3 557.5 4 765.0 5 624.5 6 484.0 7 554.0 8 624.0 9 790.5 10 957.0 11 1239.0 12 1521.0 13 1520.0 14 1519.0 15 1537.5 16 1556.0 17 1394.5 18 1233.0 19 1227.0 20 1221.0 21 1421.5 22 1622.0 23 1852.5 24 2083.0 25 2116.0 26 2444.0 27 2739.0 28 3368.0 29 3997.0 30 4462.0 31 4927.0 32 5778.0 33 6629.0 34 7493.0 35 8357.0 36 9254.0 37 10151.0 38 12201.0 39 14251.0 40 17329.5 41 20408.0 42 25831.5 43 31255.0 44 36009.0 45 40763.0 46 49669.5 47 58576.0 48 63740.0 49 68904.0 50 64730.5 51 60557.0 52 46735.0 53 32913.0 54 26351.5 55 19790.0 56 15704.0 57 11618.0 58 10803.5 59 9989.0 60 9108.0 61 8227.0 62 6709.0 63 5191.0 64 4037.5 65 2884.0 66 2258.0 67 1632.0 68 1313.5 69 995.0 70 856.5 71 718.0 72 517.0 73 316.0 74 262.5 75 202.5 76 196.0 77 131.5 78 67.0 79 51.5 80 36.0 81 24.5 82 13.0 83 7.0 84 1.0 85 1.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 442564.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.48379571848955 #Duplication Level Percentage of deduplicated Percentage of total 1 65.21757231145016 19.88079151598067 2 13.570309102979007 8.273490610639422 3 6.432361490870055 5.882483810254848 4 3.5537282749506924 4.333245070904687 5 2.2680393852055882 3.4569224650047885 6 1.4992404347113737 2.7421523486784594 7 0.9534201250490525 2.0344705028124457 8 0.7869253791574555 1.919077800314465 9 0.617071602753729 1.6929616213823047 >10 4.622758552045959 30.59965451562053 >50 0.35576680702218333 7.047287765940985 >100 0.11015373941272621 6.176274671274121 >500 0.008187102253648569 1.8545613534271792 >1k 0.0037214101152948046 2.8374289559530586 >5k 7.442820230589609E-4 1.2691969918120432 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC 5594 1.2639979754340616 No Hit CTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGCT 4365 0.9862980269520341 Illumina Single End Adapter 2 (95% over 21bp) TCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC 3239 0.7318715485217957 No Hit GCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC 2685 0.6066919134859591 No Hit TCCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTG 1113 0.25148905017127465 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGC 1104 0.2494554459919921 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCG 932 0.2105910105657035 No Hit CGCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTG 908 0.2051680660876167 No Hit GAATCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTC 866 0.19567791325096484 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCC 825 0.18641371643423324 No Hit TTCCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCT 803 0.181442683995987 No Hit TGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGCTT 779 0.17601973951790023 Illumina Single End Adapter 2 (95% over 22bp) GCCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTG 733 0.16562576260156725 No Hit TGCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTG 661 0.14935692916730686 No Hit CGTTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTC 598 0.13512169991232909 No Hit CCTGACTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC 545 0.12314603085655407 No Hit TTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTG 524 0.11840095443822814 No Hit CTGTATCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGCT 448 0.10122829692428666 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.061315425565568 0.0 2 0.0 0.0 0.0 3.9573937328838316 0.0 3 0.0 0.0 0.0 5.364195912907512 0.0 4 0.0 0.0 0.0 6.832458130349509 0.0 5 0.0 0.0 0.0 9.43795699605029 0.0 6 0.0 0.0 0.0 10.840240055675563 0.0 7 0.0 0.0 0.0 12.20546632803391 0.0 8 0.0 0.0 0.0 14.35498594553556 0.0 9 0.0 0.0 0.0 15.311909689897957 0.0 10 0.0 0.0 0.0 17.44719407814463 0.0 11 0.0 0.0 0.0 21.12349852224763 0.0 12 2.259560199202827E-4 0.0 0.0 24.674397375294873 0.0 13 2.259560199202827E-4 0.0 0.0 25.67131533518316 0.0 14 2.259560199202827E-4 0.0 0.0 25.985620158892274 0.0 15 2.259560199202827E-4 0.0 0.0 26.508482388987808 0.0 16 2.259560199202827E-4 0.0 0.0 27.85427644363301 0.0 17 2.259560199202827E-4 0.0 0.0 29.86754458112273 0.0 18 2.259560199202827E-4 0.0 0.0 32.38785802731356 0.0 19 2.259560199202827E-4 0.0 0.0 33.74833922325359 0.0 20 2.259560199202827E-4 0.0 0.0 35.137064921683645 0.0 21 2.259560199202827E-4 0.0 0.0 36.935448884229174 0.0 22 0.0011297800996014136 0.0 0.0 38.452969514013795 0.0 23 0.0011297800996014136 0.0 0.0 39.93275548847173 0.0 24 0.0011297800996014136 0.0 0.0 41.050108006977524 0.0 25 0.0011297800996014136 0.0 0.0 41.94014876944352 0.0 26 0.0011297800996014136 0.0 0.0 42.78251281170633 0.0 27 0.0011297800996014136 0.0 0.0 43.56612828878987 0.0 28 0.0011297800996014136 0.0 0.0 44.41301145145109 0.0 29 0.0011297800996014136 0.0 0.0 45.233457759781636 0.0 30 0.0011297800996014136 0.0 0.0 46.23602462016793 0.0 31 0.0011297800996014136 0.0 0.0 47.10324382462198 0.0 32 0.0011297800996014136 0.0 0.0 47.907873211558105 0.0 33 0.0011297800996014136 0.0 0.0 48.69849332525917 0.0 34 0.0011297800996014136 0.0 0.0 49.4685514411475 0.0 35 0.0011297800996014136 0.0 0.0 50.36785640043022 0.0 36 0.0011297800996014136 0.0 0.0 51.07374300666118 0.0 37 0.0011297800996014136 0.0 0.0 51.81329705986027 0.0 38 0.0011297800996014136 0.0 0.0 52.5232508744498 0.0 39 0.0011297800996014136 0.0 0.0 53.24585822615486 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTCTACG 50 2.1827873E-11 45.000004 1 CGTGGGT 50 2.1827873E-11 45.000004 4 GGTACAA 25 3.886904E-5 45.000004 8 GGTAATC 30 2.1624655E-6 45.000004 8 AAGACGC 25 3.886904E-5 45.000004 39 CCTACGG 30 2.1624655E-6 45.000004 16 TTACTTG 30 2.1624655E-6 45.000004 1 TTGTACG 60 0.0 45.000004 1 GGATACC 30 2.1624655E-6 45.000004 8 GGATACA 30 2.1624655E-6 45.000004 8 ATACTAT 30 2.1624655E-6 45.000004 45 AGACACA 25 3.886904E-5 45.000004 33 GGACGAT 30 2.1624655E-6 45.000004 8 GCGGCTC 30 2.1624655E-6 45.000004 9 TTACGTG 25 3.886904E-5 45.000004 1 GGTTGAC 25 3.886904E-5 45.000004 10 ACCGTTA 30 2.1624655E-6 45.000004 20 GACGATT 30 2.1624655E-6 45.000004 9 ACTTTAC 25 3.886904E-5 45.000004 27 TGGTGCG 25 3.886904E-5 45.000004 1 >>END_MODULE